BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041298
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF93966.1| retrotransposon protein, putative, unclassified, ...   117   5e-24
gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Ja...   117   5e-24
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]         116   6e-24
gb|ADX31265.1| unknown [Triticum aestivum]                            115   1e-23
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     115   1e-23

>gb|ABF93966.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1920

 Score =  117 bits (292), Expect = 5e-24
 Identities = 51/129 (39%), Positives = 83/129 (64%)
 Frame = +1

Query: 514 PLWMEQIVHSYEDDKEVEGIIAEVAVDKTGPQEYYLHQGLLQYRGKWVVGCSGSLRKQIF 693
           PLW+  +V  YE D++ + ++ E+A+  T  + ++L QG+L+Y+GK  +G + SL++Q+ 
Sbjct: 502 PLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLV 561

Query: 694 EELHSNGIGGHSGIRATCKRIMGYFYWSTIRQNVGTWVRECGICQQIKGEKIKNPGLLKP 873
             LH++ IGGHSG   T +R+   F W  +++ +  WV+ C ICQQ K +  K PGLL+P
Sbjct: 562 TALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQP 621

Query: 874 LQIPHEPWR 900
           L IP   W+
Sbjct: 622 LPIPEGAWQ 630


>gb|AAK98732.1|AC090485_11 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1923

 Score =  117 bits (292), Expect = 5e-24
 Identities = 51/129 (39%), Positives = 83/129 (64%)
 Frame = +1

Query: 514 PLWMEQIVHSYEDDKEVEGIIAEVAVDKTGPQEYYLHQGLLQYRGKWVVGCSGSLRKQIF 693
           PLW+  +V  YE D++ + ++ E+A+  T  + ++L QG+L+Y+GK  +G + SL++Q+ 
Sbjct: 502 PLWLTAVVKGYETDEQAQQLLTELALHPTAREHFHLVQGVLRYKGKIWIGHNLSLQQQLV 561

Query: 694 EELHSNGIGGHSGIRATCKRIMGYFYWSTIRQNVGTWVRECGICQQIKGEKIKNPGLLKP 873
             LH++ IGGHSG   T +R+   F W  +++ +  WV+ C ICQQ K +  K PGLL+P
Sbjct: 562 TALHASPIGGHSGFPVTYQRVKALFAWPQMKKMIQQWVKNCTICQQAKPDLAKYPGLLQP 621

Query: 874 LQIPHEPWR 900
           L IP   W+
Sbjct: 622 LPIPEGAWQ 630


>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
          Length = 394

 Score =  116 bits (291), Expect = 6e-24
 Identities = 52/133 (39%), Positives = 81/133 (60%)
 Frame = +1

Query: 499 LTMAVPLWMEQIVHSYEDDKEVEGIIAEVAVDKTGPQEYYLHQGLLQYRGKWVVGCSGSL 678
           +T+ +P W++ I +SYE D +   +++ +  D    + Y L  G+L+Y+G+  VG S S+
Sbjct: 85  ITVVIPEWIQDIQNSYEGDIQAHKMLSMIGTDSDPNRTYSLESGILRYKGRIYVGDSNSI 144

Query: 679 RKQIFEELHSNGIGGHSGIRATCKRIMGYFYWSTIRQNVGTWVRECGICQQIKGEKIKNP 858
           R  + ++ HS+  G H GIRAT +RI G FYW  +++ V  ++REC +CQ  K E I  P
Sbjct: 145 RTILLQDYHSSAFGRHLGIRATYQRIKGLFYWPGLKKKVENYIRECLVCQVTKSENIHIP 204

Query: 859 GLLKPLQIPHEPW 897
            LL PL+IP   W
Sbjct: 205 SLLNPLEIPDMAW 217


>gb|ADX31265.1| unknown [Triticum aestivum]
          Length = 1231

 Score =  115 bits (288), Expect = 1e-23
 Identities = 48/137 (35%), Positives = 84/137 (61%)
 Frame = +1

Query: 487  AMHNLTMAVPLWMEQIVHSYEDDKEVEGIIAEVAVDKTGPQEYYLHQGLLQYRGKWVVGC 666
            A+  +++  P W+E +  SY +DKE++  +A++A+D     +Y L  G+++Y+G+  +G 
Sbjct: 1078 AVAAISICKPAWLEAVAVSYREDKEIQDKMAQIALDPGSDSDYSLKDGVMRYKGRIWIGS 1137

Query: 667  SGSLRKQIFEELHSNGIGGHSGIRATCKRIMGYFYWSTIRQNVGTWVRECGICQQIKGEK 846
               +++ + + LH + +GGHSG  AT  RI   F+W  ++  +  +V+EC  CQ+ K E+
Sbjct: 1138 DSMIQQSLVKALHDSAVGGHSGFYATYHRIKNLFFWKGMKAQIKQYVKECVTCQRAKTER 1197

Query: 847  IKNPGLLKPLQIPHEPW 897
            I   GLL+PL IP  PW
Sbjct: 1198 IAPAGLLQPLPIPKRPW 1214



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 6/180 (3%)
 Frame = +1

Query: 64  AALGMQKPKQNSPLQLKGMCNDKPVQVLIDGGSSLNWLKASLGDXXXXXXXXXXPITVTL 243
           A  G   P+    ++L G    + + +L+D GSS ++L  ++             + V +
Sbjct: 449 ATTGQTTPRT---VRLLGQIGGQEMLILVDSGSSHSFLSDTVVARLQLPIQAMSTVAVKI 505

Query: 244 ATGDTITSHLKCNDFKWRCNGQVFTTPVWLMEMTAWDVILGVEWLSQLGDLNCNYSEQSL 423
           A G T++      + +W+  G  F T + ++ +  +D+I+G++WL   G +  ++S + L
Sbjct: 506 ADGGTLSCSGVVPECRWKTQGHEFVTDLRVLALGCYDMIVGMDWLESCGPMWIDWSAKQL 565

Query: 424 QFSWHDHQMKL----TPASQVELIGAMHNLTMAVPLWMEQIV--HSYEDDKEVEGIIAEV 585
            F+    Q++L    T   QV+ I +     +     +  I+  H+  DD  VE I  EV
Sbjct: 566 IFNHGGQQIQLAGVQTQLRQVQPISSAQLCALEEANAVAHIICLHAVGDDVVVEHIPVEV 625


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  115 bits (288), Expect = 1e-23
 Identities = 55/135 (40%), Positives = 79/135 (58%)
 Frame = +1

Query: 493  HNLTMAVPLWMEQIVHSYEDDKEVEGIIAEVAVDKTGPQEYYLHQGLLQYRGKWVVGCSG 672
            H +T+ +P W+  I  SYE+D +   I++ +       +EY L  GLL+Y+G+  VG + 
Sbjct: 993  HPMTVVIPEWIVDIQRSYENDVQAHKILSLIGTAADPDREYKLEAGLLKYKGRIYVGEAT 1052

Query: 673  SLRKQIFEELHSNGIGGHSGIRATCKRIMGYFYWSTIRQNVGTWVRECGICQQIKGEKIK 852
             +R+Q+    HS+  GGHSG+RAT  RI   FYW  +R  V  ++REC  CQ  K E + 
Sbjct: 1053 DIRRQLITTYHSSSFGGHSGMRATHHRIKMLFYWHGMRGEVERFIRECPTCQITKSEHVH 1112

Query: 853  NPGLLKPLQIPHEPW 897
             PGLL PL+IP   W
Sbjct: 1113 IPGLLNPLEIPDMAW 1127