BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041273
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533731.1| pentatricopeptide repeat-containing protein,...   210   1e-52
ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containi...   207   5e-52
ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containi...   195   4e-48
emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]   195   4e-48
ref|XP_003594946.1| Pentatricopeptide repeat-containing protein ...   195   4e-48

>ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526356|gb|EEF28650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 835

 Score =  210 bits (534), Expect = 1e-52
 Identities = 99/128 (77%), Positives = 115/128 (89%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           TFNTLISAYGR GS  DAA M+E+MIKAGF+PC+ TYNALLNALARRGDW+AAES+ILDM
Sbjct: 505 TFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDM 564

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKSI 361
           RNKGF+PSETSYSLM+ SY+KGGNV+GIE I   IYDGDI+PSWMLLR+LVLA FKC+S+
Sbjct: 565 RNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSL 624

Query: 362 VGMDRALK 385
            GM+RA +
Sbjct: 625 TGMERAFQ 632



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/119 (26%), Positives = 61/119 (51%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           T+ T+I+AYGR G    A  M+++M++ G  P V TYNA+L  L ++        ++  M
Sbjct: 400 TYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHM 459

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKS 358
           +  G  P+  +++ M+    K G  + + ++  ++ +    P      +L+ A+ +C S
Sbjct: 460 KLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGS 518


>ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
           gi|449507064|ref|XP_004162923.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  207 bits (528), Expect = 5e-52
 Identities = 95/129 (73%), Positives = 116/129 (89%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           TFNTLISAYGR GSE+DAA MY++M+KAGF PC TTYNALLNALARRGDW+AAES++LDM
Sbjct: 515 TFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDM 574

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKSI 361
           RNKGFKP+ETS+SLM+  Y+KGGNVRG+ERI   IYDG I+PSW+LLR+L+LA FKC+++
Sbjct: 575 RNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAV 634

Query: 362 VGMDRALKE 388
            GM+RA +E
Sbjct: 635 RGMERAFEE 643



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/119 (26%), Positives = 61/119 (51%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           T+ T+I+AYGR G EV A  ++ +M K+G  P V TYN++L  L ++        ++ DM
Sbjct: 410 TYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDM 469

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKS 358
           R  G  P+  +++ ++      G  + +  +  ++ +    P      +L+ A+ +C S
Sbjct: 470 RINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGS 528



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/81 (30%), Positives = 43/81 (53%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           ++NT+I  + R G   +A  +  +M   G  PC+ TYN  ++  A RG +   + +I  M
Sbjct: 725 SYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYM 784

Query: 182 RNKGFKPSETSYSLMIQSYSK 244
             K  KP+E +Y +++  Y K
Sbjct: 785 IQKNCKPNELTYKIIVDGYCK 805


>ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera] gi|297735424|emb|CBI17864.3| unnamed
           protein product [Vitis vinifera]
          Length = 821

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/129 (70%), Positives = 112/129 (86%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           TFN LI AYGR GS++D   MYE+MIKAGF PCVTTYNALLNALARRGDW AAES+ILDM
Sbjct: 492 TFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDM 551

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKSI 361
           ++KGFKP+ETSYSLM+  Y+KGGN RGIE+I  +IY+G I+PSW+LLR+LVLA FK +++
Sbjct: 552 KSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRAL 611

Query: 362 VGMDRALKE 388
           +GM+RA +E
Sbjct: 612 MGMERAFQE 620



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/129 (25%), Positives = 67/129 (51%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           T+ T+I+AYG+ G E  A + + +M ++G  P V TYNA+L  L ++        ++ DM
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKSI 361
           R+ G  P+  +++ M+      G  + + R+  ++      P+     +L+ A+ +C S 
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506

Query: 362 VGMDRALKE 388
           + + +  +E
Sbjct: 507 IDVVKMYEE 515


>emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  195 bits (495), Expect = 4e-48
 Identities = 91/129 (70%), Positives = 112/129 (86%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           TFN LI AYGR GS++D   MYE+MIKAGF PCVTTYNALLNALARRGDW AAES+ILDM
Sbjct: 492 TFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDM 551

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKSI 361
           ++KGFKP+ETSYSLM+  Y+KGGN RGIE+I  +IY+G I+PSW+LLR+LVLA FK +++
Sbjct: 552 KSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRAL 611

Query: 362 VGMDRALKE 388
           +GM+RA +E
Sbjct: 612 MGMERAFQE 620



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/129 (25%), Positives = 67/129 (51%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           T+ T+I+AYG+ G E  A + + +M ++G  P V TYNA+L  L ++        ++ DM
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKSI 361
           R+ G  P+  +++ M+      G  + + R+  ++      P+     +L+ A+ +C S 
Sbjct: 447 RSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQ 506

Query: 362 VGMDRALKE 388
           + + +  +E
Sbjct: 507 IDVVKMYEE 515


>ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359380|gb|ABN05846.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355483994|gb|AES65197.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 849

 Score =  195 bits (495), Expect = 4e-48
 Identities = 88/129 (68%), Positives = 110/129 (85%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           TFNTLISAYGR GSEVD A MY +M+ AGF PC+TTYNALLNALARRG+W+AAES++LDM
Sbjct: 520 TFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDM 579

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKSI 361
           R KGFKP+ETSYSL++  YSK GNVRG+E++  +IYDG ++PSWMLLR+LVL  +KC+ +
Sbjct: 580 RKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQL 639

Query: 362 VGMDRALKE 388
            GM+RA  +
Sbjct: 640 KGMERAFHQ 648



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/100 (30%), Positives = 54/100 (54%)
 Frame = +2

Query: 8   NTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDMRN 187
           N+++S + R      A  M + +  +G  P + TYN+L++  AR GD   AE ++ D++N
Sbjct: 662 NSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQN 721

Query: 188 KGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYP 307
            G  P   SY+ +I+ + K G V+   RI +++    + P
Sbjct: 722 SGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQP 761



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 31/129 (24%), Positives = 62/129 (48%)
 Frame = +2

Query: 2   TFNTLISAYGRGGSEVDAANMYEKMIKAGFAPCVTTYNALLNALARRGDWRAAESLILDM 181
           T+ T+I+AYG+ G    A  ++ +M + G  P V TYN +L  L +R        ++ DM
Sbjct: 415 TYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDM 474

Query: 182 RNKGFKPSETSYSLMIQSYSKGGNVRGIERIANQIYDGDIYPSWMLLRSLVLAFFKCKSI 361
           +  G  P   +++ M+    + G  + + ++  ++ +    P      +L+ A+ +C S 
Sbjct: 475 KLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSE 534

Query: 362 VGMDRALKE 388
           V + +   E
Sbjct: 535 VDVAKMYGE 543