BLASTX nr result

ID: Cnidium21_contig00041231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041231
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300362.1| multidrug resistance protein ABC transporter...   130   1e-28
ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3...   127   7e-28
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   125   3e-27
emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]   125   3e-27
ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3...   124   1e-26

>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1488

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/127 (51%), Positives = 90/127 (70%)
 Frame = +3

Query: 3   SCYCLVLDYVYCDVSQPLPLQFLISDALYIVIGLFLCFVGFSRNNEATENGISQDPLLSA 182
           SCYCLV+D++         +Q+L+SD + +    FLC+VGF RN    ++ + + PLL+ 
Sbjct: 142 SCYCLVVDFLVFHKHGSFEIQYLVSDLVSVFTAFFLCYVGFLRNE--CQDTLLEQPLLNG 199

Query: 183 DFSRLSNGEECKESGGGETVTPYASANVFSILTFSWIGSLVALGYRKPLDLEDVPQLASI 362
           D S + NG E  +S GG+++TPYA+A +FSILTFSW+GSL+A G +K LDLEDVPQL S+
Sbjct: 200 DSSSI-NGLESSKSRGGDSLTPYANAGLFSILTFSWMGSLIAFGNKKTLDLEDVPQLHSV 258

Query: 363 DSVKGAF 383
           DSV GAF
Sbjct: 259 DSVVGAF 265


>ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1493

 Score =  127 bits (320), Expect = 7e-28
 Identities = 66/129 (51%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   SCYCLVLDYVYCDVSQ-PLPLQFLISDALYIVIGLFLCFVGFSRNNEATENGISQDPLLS 179
           SCYC+V+D V     +  LP Q+L+SDA+   +G F C+VG+   NE   +   Q+PLL+
Sbjct: 143 SCYCIVVDIVVMSGRRVSLPTQYLVSDAVSTCVGFFFCYVGYFVKNEVHVDNDIQEPLLN 202

Query: 180 ADFSRLSNGEECKESGGGETVTPYASANVFSILTFSWIGSLVALGYRKPLDLEDVPQLAS 359
           AD        E KE+ GG+TVTP+++A + SILTFSW+G L+A+G +K LDLEDVPQL S
Sbjct: 203 AD------SLESKETKGGDTVTPFSNAGILSILTFSWVGPLIAVGNKKTLDLEDVPQLDS 256

Query: 360 IDSVKGAFP 386
            DSV GAFP
Sbjct: 257 RDSVIGAFP 265


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/129 (51%), Positives = 91/129 (70%)
 Frame = +3

Query: 3   SCYCLVLDYVYCDVSQPLPLQFLISDALYIVIGLFLCFVGFSRNNEATENGISQDPLLSA 182
           SCYCLV+D V    SQP+  QFL+ DA+Y++ GLFLC++G    N+  E+ I ++ LL  
Sbjct: 144 SCYCLVIDIVKQHQSQPI--QFLVPDAVYVITGLFLCYLGLWGKNQGEES-ILRESLLHG 200

Query: 183 DFSRLSNGEECKESGGGETVTPYASANVFSILTFSWIGSLVALGYRKPLDLEDVPQLASI 362
             S +S      +S G ETVTP+++A VFS+LTFSW+G L+ALG +K LDLEDVPQL ++
Sbjct: 201 SAS-ISTRVASNKSKGEETVTPFSNAGVFSLLTFSWMGPLIALGNKKTLDLEDVPQLDAV 259

Query: 363 DSVKGAFPL 389
           +SV G FP+
Sbjct: 260 NSVVGGFPI 268


>emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]
          Length = 1458

 Score =  125 bits (315), Expect = 3e-27
 Identities = 66/129 (51%), Positives = 91/129 (70%)
 Frame = +3

Query: 3   SCYCLVLDYVYCDVSQPLPLQFLISDALYIVIGLFLCFVGFSRNNEATENGISQDPLLSA 182
           SCYCLV+D V    SQP+  QFL+ DA+Y++ GLFLC++G    N+  E+ I ++ LL  
Sbjct: 138 SCYCLVIDIVKQHQSQPI--QFLVPDAVYVITGLFLCYLGLWGKNQGEES-ILRESLLHG 194

Query: 183 DFSRLSNGEECKESGGGETVTPYASANVFSILTFSWIGSLVALGYRKPLDLEDVPQLASI 362
             S +S      +S G ETVTP+++A VFS+LTFSW+G L+ALG +K LDLEDVPQL ++
Sbjct: 195 SAS-ISTRVASNKSKGEETVTPFSNAGVFSLLTFSWMGPLIALGNKKTLDLEDVPQLDAV 253

Query: 363 DSVKGAFPL 389
           +SV G FP+
Sbjct: 254 NSVVGGFPI 262


>ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 2054

 Score =  124 bits (310), Expect = 1e-26
 Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 2/130 (1%)
 Frame = +3

Query: 3    SCYCLVLDYVYCDVSQ-PLPLQFLISDALYIVIGLFLCFVGFSRNNEA-TENGISQDPLL 176
            SCYC+V+D V     +  LP Q+L+SD +   +GLF C+VG+   NE   +NGI  +PLL
Sbjct: 704  SCYCIVVDIVVMSGRRVSLPTQYLVSDVVSTCVGLFFCYVGYFVKNEVHVDNGI-HEPLL 762

Query: 177  SADFSRLSNGEECKESGGGETVTPYASANVFSILTFSWIGSLVALGYRKPLDLEDVPQLA 356
            +AD        E KE+ GG++VTP++ A + SILTFSW+G L+A+G +K LDLEDVPQL 
Sbjct: 763  NAD------SLESKETKGGDSVTPFSYAGILSILTFSWVGPLIAVGNKKTLDLEDVPQLD 816

Query: 357  SIDSVKGAFP 386
            S DSV GAFP
Sbjct: 817  SRDSVIGAFP 826


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