BLASTX nr result

ID: Cnidium21_contig00041226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041226
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275123.1| PREDICTED: uncharacterized protein LOC100261...   162   2e-38
ref|XP_002520745.1| conserved hypothetical protein [Ricinus comm...   149   2e-34
ref|XP_002307581.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_003554250.1| PREDICTED: uncharacterized protein LOC100783...   147   7e-34
gb|ACU24550.1| unknown [Glycine max]                                  147   7e-34

>ref|XP_002275123.1| PREDICTED: uncharacterized protein LOC100261455 [Vitis vinifera]
           gi|296086700|emb|CBI32335.3| unnamed protein product
           [Vitis vinifera]
          Length = 341

 Score =  162 bits (411), Expect = 2e-38
 Identities = 83/119 (69%), Positives = 97/119 (81%), Gaps = 2/119 (1%)
 Frame = +2

Query: 74  SSRGLKRKIDSQEHAENGQDNTVTEDEIE--SGKLKKCKNIAISMANKAASLARELRSVK 247
           S RGLKRK+D  E +E+   N+  E+E     GKLKK KN+AISMA KAASLAREL+S+K
Sbjct: 140 SKRGLKRKLDGNEGSEDQGGNSQRENEQSPGEGKLKKAKNLAISMATKAASLARELKSIK 199

Query: 248 SDLCFMQQRCALLEEENGRFRDGFTEGLRPEEDDMMRLQMEVLLAEKSRLATENTNLTR 424
           SDLCFMQ+RCALLEEEN R RDGF +G+RPEEDD++RLQ+E LLAEKSRLA EN NLTR
Sbjct: 200 SDLCFMQERCALLEEENSRLRDGFVKGMRPEEDDLVRLQLEALLAEKSRLANENANLTR 258


>ref|XP_002520745.1| conserved hypothetical protein [Ricinus communis]
           gi|223540130|gb|EEF41707.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 357

 Score =  149 bits (376), Expect = 2e-34
 Identities = 74/119 (62%), Positives = 97/119 (81%), Gaps = 2/119 (1%)
 Frame = +2

Query: 74  SSRGLKRKIDSQEHAENGQDNTV--TEDEIESGKLKKCKNIAISMANKAASLARELRSVK 247
           +++GLKRK D   ++ + + ++   TE+  +  KLKK KN+A+SMA KAASLAREL+S++
Sbjct: 161 TNKGLKRKFDQTGNSVDQESDSQKETEESPKDNKLKKAKNLAVSMATKAASLARELKSLR 220

Query: 248 SDLCFMQQRCALLEEENGRFRDGFTEGLRPEEDDMMRLQMEVLLAEKSRLATENTNLTR 424
           SDLCF+Q+RC+LLEEEN R RDGF++G+RPEEDD+MRLQME LLAEKSRLA EN NL R
Sbjct: 221 SDLCFVQERCSLLEEENRRLRDGFSKGIRPEEDDLMRLQMEALLAEKSRLANENANLIR 279


>ref|XP_002307581.1| predicted protein [Populus trichocarpa] gi|222857030|gb|EEE94577.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  148 bits (374), Expect = 4e-34
 Identities = 77/120 (64%), Positives = 90/120 (75%), Gaps = 2/120 (1%)
 Frame = +2

Query: 71  GSSRGLKRKIDSQEHAENGQDNTVTEDE--IESGKLKKCKNIAISMANKAASLARELRSV 244
           G    LKRK D  + +E   ++   E+E  +E  KLKK KN+A+SMA KAA+LAREL+S+
Sbjct: 98  GKKTRLKRKFDPDDRSEEQGNDFHKENEQCLEDKKLKKAKNLAVSMATKAAALARELKSM 157

Query: 245 KSDLCFMQQRCALLEEENGRFRDGFTEGLRPEEDDMMRLQMEVLLAEKSRLATENTNLTR 424
           KSD CFMQ+RCALLEEEN R RDGF EG RPEEDD+MRLQME LLAEKSRL  EN NL R
Sbjct: 158 KSDFCFMQERCALLEEENRRIRDGFCEGTRPEEDDLMRLQMEALLAEKSRLGNENANLKR 217


>ref|XP_003554250.1| PREDICTED: uncharacterized protein LOC100783134 [Glycine max]
          Length = 340

 Score =  147 bits (372), Expect = 7e-34
 Identities = 76/123 (61%), Positives = 94/123 (76%), Gaps = 6/123 (4%)
 Frame = +2

Query: 74  SSRGLKRKIDSQEHAENGQDNTVTEDEIESGK------LKKCKNIAISMANKAASLAREL 235
           S +G+KRK D  + +E   +N V   + E+GK      +KK KN+A+SMA KAASLAREL
Sbjct: 142 SKQGMKRKFDPNDVSE---ENAVDSQKEENGKKMMDTNIKKAKNLAVSMATKAASLAREL 198

Query: 236 RSVKSDLCFMQQRCALLEEENGRFRDGFTEGLRPEEDDMMRLQMEVLLAEKSRLATENTN 415
           +S+KSDLCFMQ+RC LLEEEN R RDGF +G+RPEEDD++RLQ+E LLAEKSRLA EN N
Sbjct: 199 KSIKSDLCFMQERCGLLEEENRRLRDGFAKGVRPEEDDLVRLQLEALLAEKSRLANENAN 258

Query: 416 LTR 424
           L R
Sbjct: 259 LVR 261


>gb|ACU24550.1| unknown [Glycine max]
          Length = 340

 Score =  147 bits (372), Expect = 7e-34
 Identities = 76/123 (61%), Positives = 94/123 (76%), Gaps = 6/123 (4%)
 Frame = +2

Query: 74  SSRGLKRKIDSQEHAENGQDNTVTEDEIESGK------LKKCKNIAISMANKAASLAREL 235
           S +G+KRK D  + +E   +N V   + E+GK      +KK KN+A+SMA KAASLAREL
Sbjct: 142 SKQGMKRKFDPNDVSE---ENAVDSQKEENGKKMMDTNIKKAKNLAVSMATKAASLAREL 198

Query: 236 RSVKSDLCFMQQRCALLEEENGRFRDGFTEGLRPEEDDMMRLQMEVLLAEKSRLATENTN 415
           +S+KSDLCFMQ+RC LLEEEN R RDGF +G+RPEEDD++RLQ+E LLAEKSRLA EN N
Sbjct: 199 KSIKSDLCFMQERCGLLEEENRRLRDGFAKGVRPEEDDLVRLQLEALLAEKSRLANENAN 258

Query: 416 LTR 424
           L R
Sbjct: 259 LVR 261


Top