BLASTX nr result

ID: Cnidium21_contig00041223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041223
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265994.1| PREDICTED: putative RING-H2 finger protein A...    98   6e-19
ref|XP_002304557.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002509961.1| ring finger protein, putative [Ricinus commu...    95   7e-18
ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262...    87   1e-15

>ref|XP_002265994.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
           gi|297742332|emb|CBI34481.3| unnamed protein product
           [Vitis vinifera]
          Length = 386

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/128 (43%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
 Frame = -3

Query: 383 CEQENGTCGYKNDKTLEFXXXXXXXXXST-TAKYGIIVGAGLPGLFLLTCLAIYARKKIN 207
           CEQE  TCG+K     E             +AKYG+I+G G+PGL  L  ++     +I 
Sbjct: 199 CEQEGITCGFKRGTDSEIESSKASSHGLPRSAKYGLIIGIGIPGLLCLIGISCCICGRI- 257

Query: 206 DRAQMQHQHRVHYXXXXXXXXXXXRFVLGLDKLTIDSYPMTVLGESKRLPKPSDSTCAIC 27
            R   + +HR                V+GLD  TI+SYP TVLGES RLPKPSD TC IC
Sbjct: 258 -RTYARRRHRSDTDFAISIGPLPAVVVMGLDGPTIESYPKTVLGESMRLPKPSDGTCPIC 316

Query: 26  LSEYKPND 3
           LSEY+P D
Sbjct: 317 LSEYQPKD 324


>ref|XP_002304557.1| predicted protein [Populus trichocarpa] gi|222841989|gb|EEE79536.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/130 (40%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
 Frame = -3

Query: 386 RCEQENGTCGYKNDK--TLEFXXXXXXXXXSTTAKYGIIVGAGLPGLFLLTCLAIYARKK 213
           RCE++ GTCG+K D   T+E            +AKYGI++GAG+PGL  +  +  Y   +
Sbjct: 201 RCEKDGGTCGFKGDTGLTIESKGRRSNGPLPRSAKYGIVLGAGIPGLLCIFGIGSYLFGR 260

Query: 212 INDRAQMQHQHRVHYXXXXXXXXXXXRFVLGLDKLTIDSYPMTVLGESKRLPKPSDSTCA 33
           + + +   +Q    +             + GLD  TI+SYP T LG+S RLPKP+D+TC 
Sbjct: 261 LKEYSG-GNQPTTEFSTAIAPQPSVV--ITGLDAPTIESYPKTQLGDSGRLPKPNDNTCP 317

Query: 32  ICLSEYKPND 3
           ICLSEY+P D
Sbjct: 318 ICLSEYQPKD 327


>ref|XP_002509961.1| ring finger protein, putative [Ricinus communis]
           gi|223549860|gb|EEF51348.1| ring finger protein,
           putative [Ricinus communis]
          Length = 392

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
 Frame = -3

Query: 383 CEQENGTCGYKNDKTLE---FXXXXXXXXXSTTAKYGIIVGAGLPGLFLLTCLAIYARKK 213
           CE+  GTCG+K D  L+   F           +AKYGII+G G+PGL  +  L  Y   +
Sbjct: 196 CEERGGTCGFKGDTGLDIGCFDLPRSKRALPRSAKYGIIIGIGIPGLLCIIGLGCYVAGR 255

Query: 212 INDRAQMQHQHRVHYXXXXXXXXXXXRFVLGLDKLTIDSYPMTVLGESKRLPKPSDSTCA 33
           +    +  H                   V G+D  T++ YP T+LGES+RLPKP+D+TC 
Sbjct: 256 VGTYRRSLHSSTA---LNATFPRQPSMAVTGIDGATLELYPKTLLGESRRLPKPNDNTCP 312

Query: 32  ICLSEYKPND 3
           ICL EY+P +
Sbjct: 313 ICLCEYQPKE 322


>ref|XP_002297975.1| predicted protein [Populus trichocarpa] gi|222845233|gb|EEE82780.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/128 (39%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
 Frame = -3

Query: 383 CEQENGTCGYKNDKTLEFXXXXXXXXXST-TAKYGIIVGAGLPGLFLLTCLAIYARKKIN 207
           CE + GTC +K +  L              +AKYGII+GAG+PGL  +  +  Y   ++ 
Sbjct: 198 CEVDGGTCQFKGNTGLTIDCNGRSKGPLPRSAKYGIIIGAGIPGLLCIIGIVSYVFGRLK 257

Query: 206 DRAQMQHQHRVHYXXXXXXXXXXXRFVLGLDKLTIDSYPMTVLGESKRLPKPSDSTCAIC 27
            R+     +                 V GLD  TI+SYP T LG+S RLPKP+D+TC IC
Sbjct: 258 ARSS---GNEPTMEMSTSVAPQPCVVVTGLDGPTIESYPKTQLGDSGRLPKPNDNTCPIC 314

Query: 26  LSEYKPND 3
           LSEY+P D
Sbjct: 315 LSEYQPKD 322


>ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262465 [Vitis vinifera]
          Length = 1054

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
 Frame = -3

Query: 383 CEQENGTCGYKNDKTLEFXXXXXXXXXST-TAKYGIIVGAGLPGLFLLTCLAIYARKKIN 207
           CE E G CG++++ +LE             TA+Y I VG G+P L     L  +    + 
Sbjct: 180 CEMEGGRCGFRSNSSLEIGCFDVPKRGLPRTARYAITVGVGIPALMCFVGLLCF----LC 235

Query: 206 DRAQMQHQHRVHYXXXXXXXXXXXRFVLGLDKLTIDSYPMTVLGESKRLPKPSDSTCAIC 27
            R +     R                V+GLD  TI+SYP  VLGES+RLPKP D+TC+IC
Sbjct: 236 GRVKAFGGRRRPIAEFTSMVTPQPTAVMGLDGPTIESYPKVVLGESRRLPKPDDNTCSIC 295

Query: 26  LSEYKPND 3
           LSEY+P +
Sbjct: 296 LSEYRPKE 303


Top