BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041162
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   176   9e-42
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   169   1e-39
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   132   1e-28
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   132   1e-28
gb|EEE59647.1| hypothetical protein OsJ_12023 [Oryza sativa Japo...   129   1e-27

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  176 bits (445), Expect = 9e-42
 Identities = 102/304 (33%), Positives = 148/304 (48%), Gaps = 4/304 (1%)
 Frame = +3

Query: 9    IPF*SDQDVWFWRKERMGNYSVKSAYVMLQ---EQKNLTTANTNDHF-WKRLWALKIPLK 176
            +P  S +D   W  +  G Y+ +S Y  L+   +   L  ++ + +F W +LW +  P K
Sbjct: 460  LPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPK 519

Query: 177  VKHLVWRAATGCLPTKSQLQSKHVNIDALCPQCQLESETIDHALLSCSFARDCWLQLRGG 356
            + +  WRAA  CLPT+  L  +HV+    CP C+ E ET  HAL+ C  ARD W +    
Sbjct: 520  ILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLA 579

Query: 357  SDSNPQGSFIDWLSYIFDSWDIKQRQEAAMLCWSLWKCRNELVWNQRGTEVTDVVASARV 536
                  GSF+DWL+ +F   D     +   +CW LW  RN++VWN R      VV     
Sbjct: 580  MLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFT 639

Query: 537  VFSQWKYAQDKTFDNYLGLMTNADGIEHWTLPQDNMVKVNSDAAIFETSNCYSFSLVARN 716
            +   W +A     +     +T       W  P    +K+N D A+F      +   V R+
Sbjct: 640  MLESWFHAN----ETLATAVTVPSYSSKWQKPDYGWIKINVDGAVFPDKG--AIGAVFRD 693

Query: 717  HQGELLHASSKCNMGNVTPENAEAMGVREALSWIKEQQYSNVVVETDCLVVVQALRSSGS 896
            HQG  +   +K       P+  EA+GVRE LSWI E+  S +VVETDCL VVQA++    
Sbjct: 694  HQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSC 753

Query: 897  KSNS 908
             + S
Sbjct: 754  PNTS 757


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  169 bits (427), Expect = 1e-39
 Identities = 93/278 (33%), Positives = 138/278 (49%), Gaps = 1/278 (0%)
 Frame = +3

Query: 27   QDVWFWRKERMGNYSVKSAYVMLQEQKNLTTANTNDHFWKRLWALKIPLKVKHLVWRAAT 206
            +D W+W  +  GNY VK+ Y +LQ             FW + W LKIP KV++L+W+  +
Sbjct: 394  EDSWYWLFDDKGNYLVKNCYRLLQGD----LGRPETSFWNKFWKLKIPTKVRNLMWKICS 449

Query: 207  GCLPTKSQLQSKHVNIDALCPQCQLESETIDHALLSCSFARDCWLQLRGGSDSNPQGSFI 386
             C+ T   L+ ++V++D LC  C  E ET+ H L  CS AR+CW  L G   S P  S I
Sbjct: 450  NCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCSMARECW-DLLGFRFSFPTESPI 508

Query: 387  -DWLSYIFDSWDIKQRQEAAMLCWSLWKCRNELVWNQRGTEVTDVVASARVVFSQWKYAQ 563
              W+   F         + A++C SLW  RN  VWN++      V++ A  +  Q   AQ
Sbjct: 509  CSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQ 568

Query: 564  DKTFDNYLGLMTNADGIEHWTLPQDNMVKVNSDAAIFETSNCYSFSLVARNHQGELLHAS 743
                +    L  N D    WT P+   +K+N+D A+F          V R+  G ++ A 
Sbjct: 569  SADEEIAPPLGHNTDVTRKWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMAR 628

Query: 744  SKCNMGNVTPENAEAMGVREALSWIKEQQYSNVVVETD 857
            S+  +G  T   AEA+ ++EALS++K+ Q      E D
Sbjct: 629  SERRVGRFTAREAEALSMKEALSYMKDYQMDKCFFELD 666


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  132 bits (332), Expect = 1e-28
 Identities = 93/317 (29%), Positives = 143/317 (45%), Gaps = 21/317 (6%)
 Frame = +3

Query: 24   DQDVWFWRKERMGNYSVKSAYVMLQEQKNLTTANTNDHF-----------WKRLWALKIP 170
            D D   W  +++G YSV+SAY + + +      + +              WK LW +  P
Sbjct: 1013 DADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAP 1072

Query: 171  LKVKHLVWRAATGCLPTKSQLQSKHVNIDALCPQCQLESETIDHALLSCSFARDCWLQLR 350
             K+K  +WRAA  CL T  QL+ +H+     C  C  + +T++H  L C FA   W +++
Sbjct: 1073 GKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNRD-DTVEHVFLFCPFAAQIWEEIK 1131

Query: 351  GGSDSN-PQGSFIDWLSYIFDSWDIKQRQEAAMLC---WSLWKCRNELVWNQRGTEVTDV 518
            G       +  F     +IFD           +L    W +W+ RN    N  GT     
Sbjct: 1132 GKCAVKLGRNGFSTMRQWIFDFLKRGSSHANTLLAVTFWHIWEARNNTK-NNNGT----- 1185

Query: 519  VASARVVFSQWKYAQ------DKTFDNYLGLMTNADGIEHWTLPQDNMVKVNSDAAIFET 680
            V   RVV     Y         KT D   G   N   I  W  P  ++  +NSDAAIF +
Sbjct: 1186 VHPQRVVIKILSYVDMILKHNTKTVDGQRG--GNTQAIPRWQPPPASVWMINSDAAIFSS 1243

Query: 681  SNCYSFSLVARNHQGELLHASSKCNMGNVTPENAEAMGVREALSWIKEQQYSNVVVETDC 860
            S       + R++ G+ L A S+     V PE AEA+ +R AL   KE+   ++V+ +DC
Sbjct: 1244 SRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDC 1303

Query: 861  LVVVQALRSSGSKSNSI 911
            L V++ +++SG   + +
Sbjct: 1304 LTVIRRIQTSGRDRSGV 1320


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  132 bits (332), Expect = 1e-28
 Identities = 93/317 (29%), Positives = 143/317 (45%), Gaps = 21/317 (6%)
 Frame = +3

Query: 24   DQDVWFWRKERMGNYSVKSAYVMLQEQKNLTTANTNDHF-----------WKRLWALKIP 170
            D D   W  +++G YSV+SAY + + +      + +              WK LW +  P
Sbjct: 970  DADFASWPHDKLGLYSVRSAYNLARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAP 1029

Query: 171  LKVKHLVWRAATGCLPTKSQLQSKHVNIDALCPQCQLESETIDHALLSCSFARDCWLQLR 350
             K+K  +WRAA  CL T  QL+ +H+     C  C  + +T++H  L C FA   W +++
Sbjct: 1030 GKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNRD-DTVEHVFLFCPFAAQIWEEIK 1088

Query: 351  GGSDSN-PQGSFIDWLSYIFDSWDIKQRQEAAMLC---WSLWKCRNELVWNQRGTEVTDV 518
            G       +  F     +IFD           +L    W +W+ RN    N  GT     
Sbjct: 1089 GKCAVKLGRNGFSTMRQWIFDFLKRGSSHANTLLAVTFWHIWEARNNTK-NNNGT----- 1142

Query: 519  VASARVVFSQWKYAQ------DKTFDNYLGLMTNADGIEHWTLPQDNMVKVNSDAAIFET 680
            V   RVV     Y         KT D   G   N   I  W  P  ++  +NSDAAIF +
Sbjct: 1143 VHPQRVVIKILSYVDMILKHNTKTVDGQRG--GNTQAIPRWQPPPASVWMINSDAAIFSS 1200

Query: 681  SNCYSFSLVARNHQGELLHASSKCNMGNVTPENAEAMGVREALSWIKEQQYSNVVVETDC 860
            S       + R++ G+ L A S+     V PE AEA+ +R AL   KE+   ++V+ +DC
Sbjct: 1201 SRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDC 1260

Query: 861  LVVVQALRSSGSKSNSI 911
            L V++ +++SG   + +
Sbjct: 1261 LTVIRRIQTSGRDRSGV 1277


>gb|EEE59647.1| hypothetical protein OsJ_12023 [Oryza sativa Japonica Group]
          Length = 1145

 Score =  129 bits (324), Expect = 1e-27
 Identities = 94/317 (29%), Positives = 142/317 (44%), Gaps = 21/317 (6%)
 Frame = +3

Query: 24   DQDVWFWRKERMGNYSVKSAYVMLQEQKNLTTANTNDHF-----------WKRLWALKIP 170
            D D   W  E++G YSV+SAY M++ +      + +              WK LW +  P
Sbjct: 776  DADFASWPHEKLGLYSVRSAYNMVRSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAP 835

Query: 171  LKVKHLVWRAATGCLPTKSQLQSKHVNIDALCPQCQLESETIDHALLSCSFARDCWLQL- 347
             K+K ++WRAA  CL T  QL  +H+     C  C  + +T++H  L C FA   W ++ 
Sbjct: 836  GKMKIILWRAAHECLATGFQLPRRHIPSTDGCVFCNRD-DTVEHVFLFCPFAAQIWEEIK 894

Query: 348  RGGSDSNPQGSFIDWLSYIFDSWDIKQRQEAAMLC---WSLWKCRNELVWNQRGTEVTDV 518
            R  +    +  F     +IFD           +L    W +W+ RN    N  GT     
Sbjct: 895  RKCAVKLGRNGFSTMRHWIFDFLKRGSSHTNTLLAVTFWHIWEARNNTK-NNNGT----- 948

Query: 519  VASARVVFSQWKYAQ------DKTFDNYLGLMTNADGIEHWTLPQDNMVKVNSDAAIFET 680
            V   RVV     Y         KT D   G   N   I  W      +  +NSDAAIF +
Sbjct: 949  VHPQRVVIKILSYVDMILKHNTKTVDGQRG--ENTQAIPRWQPLPAGVWMINSDAAIFSS 1006

Query: 681  SNCYSFSLVARNHQGELLHASSKCNMGNVTPENAEAMGVREALSWIKEQQYSNVVVETDC 860
            S       + R++ G+ L A S+     V PE AEA+ +R AL   KE+   ++V+ +DC
Sbjct: 1007 SRTMGVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLQHIVMASDC 1066

Query: 861  LVVVQALRSSGSKSNSI 911
            L V++ +++SG   + +
Sbjct: 1067 LTVIRRIQTSGRDRSGV 1083