BLASTX nr result

ID: Cnidium21_contig00041150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041150
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    99   3e-19
ref|XP_002535169.1| conserved hypothetical protein [Ricinus comm...    95   5e-18
ref|YP_173386.1| hypothetical protein NitaMp040 [Nicotiana tabac...    73   2e-11

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/48 (95%), Positives = 47/48 (97%), Gaps = 1/48 (2%)
 Frame = -2

Query: 252 HF-PSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVLRLFGRHG 112
           HF PSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVL+LFGRHG
Sbjct: 556 HFVPSCSSIGNQDKPGTTVRRENTRSHSDLDMWNRLAPYVLKLFGRHG 603


>ref|XP_002535169.1| conserved hypothetical protein [Ricinus communis]
           gi|223523841|gb|EEF27214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 84

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = +1

Query: 88  ASFLHRAWTMSPEQSQYIWRKTIPHIEVGMGSGVFTSHRSARFVLISD 231
           +SFL+RAWTMSPEQSQYIWRKTIPHIEVGMGSGVFTS+RSARFVLI D
Sbjct: 37  SSFLYRAWTMSPEQSQYIWRKTIPHIEVGMGSGVFTSYRSARFVLIPD 84


>ref|YP_173386.1| hypothetical protein NitaMp040 [Nicotiana tabacum]
           gi|56806549|dbj|BAD83450.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 108

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/67 (61%), Positives = 43/67 (64%), Gaps = 13/67 (19%)
 Frame = +3

Query: 234 MNKKENGTLLFCDSPA-RHQWKQASP------------RLGEEGISIAKDSIQPQVPLRL 374
           MNKKENGT+LF   P  R  W    P            +LGEE ISIAKDSIQPQVPLRL
Sbjct: 1   MNKKENGTILFLTRPRLRVLWTLRPPATSGSKLAPYVGKLGEECISIAKDSIQPQVPLRL 60

Query: 375 PCYDFTP 395
           PCYDFTP
Sbjct: 61  PCYDFTP 67


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