BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041109
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   252   4e-65
ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arab...   244   9e-63
ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein ...   243   3e-62
dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]           240   2e-61
ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-bin...   228   6e-58

>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
           hypothetical protein VITISV_022491 [Vitis vinifera]
          Length = 250

 Score =  252 bits (644), Expect = 4e-65
 Identities = 133/222 (59%), Positives = 154/222 (69%), Gaps = 9/222 (4%)
 Frame = +3

Query: 3   NTSDDEEDETFYYRYATAA---PPPSTTHQSSSRPSTGSGGLAPSKSTVYISNLDYSLTN 173
           N SD EEDET YYRYA+++   P P +      + S+GSG LAPSKSTVY+SNLDY+LTN
Sbjct: 5   NNSDSEEDETLYYRYASSSIPNPNPKSNSSKLQKRSSGSGSLAPSKSTVYVSNLDYTLTN 64

Query: 174 SDLFTIFSTFGKVAKVTILKNRQTRESRGVAFVLFVLRDDAVNAVKGMNGKVLNKRTLSA 353
           SDLFTIFSTFGKVAKVTILK+R TR SRGVAFVLFV RD+A+ A + MNGKVLNKRTL+A
Sbjct: 65  SDLFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAAREMNGKVLNKRTLTA 124

Query: 354 SIAADNGRAKEFIRKKIYKDKSRCYECGEEGHLSYECPKNVLG------XXXXXXXXXXX 515
           SIAADNGRA EFIR+++YKDKSRCYECGE GHLSYECP+N LG                 
Sbjct: 125 SIAADNGRAAEFIRRRVYKDKSRCYECGEGGHLSYECPRNQLGPRERPVPKRSRRGQGGS 184

Query: 516 XXXXXXXXXXXXXXXXXXXXXXXWASVVDSDADERLLRNEDG 641
                                  WASVVD+ AD+RLL+  +G
Sbjct: 185 EARQNGDHDNGGSDGGEAFEDDNWASVVDTGADQRLLKGSEG 226


>ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
           lyrata] gi|297328506|gb|EFH58925.1| hypothetical protein
           ARALYDRAFT_897216 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  244 bits (624), Expect = 9e-63
 Identities = 130/228 (57%), Positives = 154/228 (67%), Gaps = 13/228 (5%)
 Frame = +3

Query: 9   SDDEEDETFYYRYAT-AAPPPSTTHQ------SSSRPSTGSGGLAPSKSTVYISNLDYSL 167
           SDDEED+TFYYRY++ AAPPPS   Q       SS P  GSGGLAPSKST+Y+SNLD+SL
Sbjct: 9   SDDEEDDTFYYRYSSVAAPPPSNPRQPSSSSAKSSAPGGGSGGLAPSKSTLYVSNLDFSL 68

Query: 168 TNSDLFTIFSTFGKVAKVTILKNRQTRESRGVAFVLFVLRDDAVNAVKGMNGKVLNKRTL 347
           TNSD+ T+FSTFGKVA+VT+LK+R TR+SRGVAFVL+V R+DA  A + M+ K+LN R L
Sbjct: 69  TNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKL 128

Query: 348 SASIAADNGRAKEFIRKKIYKDKSRCYECGEEGHLSYECPKNVLG------XXXXXXXXX 509
           + SIAADNGRA EFI+K++YKDKSRCYECG+EGHLSYECPKN LG               
Sbjct: 129 TVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGRRK 188

Query: 510 XXXXXXXXXXXXXXXXXXXXXXXXXWASVVDSDADERLLRNEDGEAEE 653
                                    WASVVD++A ERL   E  E EE
Sbjct: 189 EDEGEAEEIRDWSAAPSLEGFEEENWASVVDNEAGERLRMREAEEEEE 236


>ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
           thaliana] gi|12322795|gb|AAG51392.1|AC011560_24
           hypothetical protein; 114721-113936 [Arabidopsis
           thaliana] gi|54261729|gb|AAV31168.1| At3g10400
           [Arabidopsis thaliana] gi|61656137|gb|AAX49371.1|
           At3g10400 [Arabidopsis thaliana]
           gi|332641379|gb|AEE74900.1| small nuclear
           ribonucleoprotein 31 kDa protein [Arabidopsis thaliana]
          Length = 261

 Score =  243 bits (620), Expect = 3e-62
 Identities = 131/232 (56%), Positives = 156/232 (67%), Gaps = 17/232 (7%)
 Frame = +3

Query: 9   SDDEEDETFYYRYAT-AAPPPSTT-HQ-----SSSRPSTGSGGLAPSKSTVYISNLDYSL 167
           SDDEED+TFYYRY++ AAPPPS   HQ      SS P  GSGGLAPSKST+Y+SNLD+SL
Sbjct: 9   SDDEEDDTFYYRYSSVAAPPPSNPKHQPSSSAKSSAPGGGSGGLAPSKSTLYVSNLDFSL 68

Query: 168 TNSDLFTIFSTFGKVAKVTILKNRQTRESRGVAFVLFVLRDDAVNAVKGMNGKVLNKRTL 347
           TNSD+ T+FSTFGKVA+VT+LK+R TR+SRGVAFVL+V R+DA  A + M+ K+LN R L
Sbjct: 69  TNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKL 128

Query: 348 SASIAADNGRAKEFIRKKIYKDKSRCYECGEEGHLSYECPKNVLG----------XXXXX 497
           + SIAADNGRA EFI+K++YKDKSRCYECG+EGHLSYECPKN LG               
Sbjct: 129 TVSIAADNGRASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGRRK 188

Query: 498 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASVVDSDADERLLRNEDGEAEE 653
                                        WASVVD++A ERL + E  E EE
Sbjct: 189 EEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRKREAEEEEE 240


>dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
          Length = 261

 Score =  240 bits (612), Expect = 2e-61
 Identities = 130/232 (56%), Positives = 155/232 (66%), Gaps = 17/232 (7%)
 Frame = +3

Query: 9   SDDEEDETFYYRYAT-AAPPPSTT-HQ-----SSSRPSTGSGGLAPSKSTVYISNLDYSL 167
           SDDEED+TFYYRY++ AAPPPS   HQ      SS P  GSGGLAPSKST+Y+SNLD+SL
Sbjct: 9   SDDEEDDTFYYRYSSVAAPPPSNPKHQPSSSAKSSAPGGGSGGLAPSKSTLYVSNLDFSL 68

Query: 168 TNSDLFTIFSTFGKVAKVTILKNRQTRESRGVAFVLFVLRDDAVNAVKGMNGKVLNKRTL 347
           TNSD+ T+FSTFGKVA+VT+LK+R TR+SRGVAFVL+V R+DA  A + M+ K+LN R L
Sbjct: 69  TNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAARSMDAKILNGRKL 128

Query: 348 SASIAADNGRAKEFIRKKIYKDKSRCYECGEEGHLSYECPKNVLG----------XXXXX 497
           + SIAADNG A EFI+K++YKDKSRCYECG+EGHLSYECPKN LG               
Sbjct: 129 TVSIAADNGLASEFIKKRVYKDKSRCYECGDEGHLSYECPKNQLGPRERPPPPKKRGRRK 188

Query: 498 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASVVDSDADERLLRNEDGEAEE 653
                                        WASVVD++A ERL + E  E EE
Sbjct: 189 EEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRKREAEEEEE 240


>ref|XP_004142290.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1-like [Cucumis sativus]
          Length = 261

 Score =  228 bits (582), Expect = 6e-58
 Identities = 125/233 (53%), Positives = 149/233 (63%), Gaps = 17/233 (7%)
 Frame = +3

Query: 6   TSDDEEDETFYYRYATAA------PPPSTTH---------QSSSRPSTGSGGLAPSKSTV 140
           TSD +EDETFYYRY +A       P  S +H          SS++   GSGGL PSKST+
Sbjct: 12  TSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTL 71

Query: 141 YISNLDYSLTNSDLFTIFSTFGKVAKVTILKNRQTRESRGVAFVLFVLRDDAVNAVKGMN 320
           Y+SN DYSLTNSDL T+FS FGK+A+VT+LK+RQTR+SRGVAFV F+ +DDAV A K M+
Sbjct: 72  YVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMH 131

Query: 321 GKVLNKRTLSASIAADNGRAKEFIRKKIYKDKSRCYECGE-EGHLSYECPKNVLG-XXXX 494
           GK+LN R L A+IA DNGRA EFIRK++YKDKSRCYECG  +GHLSYECPKN LG     
Sbjct: 132 GKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAIDGHLSYECPKNQLGPRERP 191

Query: 495 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWASVVDSDADERLLRNEDGEAEE 653
                                         WASVVD DAD+RLL   +   E+
Sbjct: 192 EPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEK 244