BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041093
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   196   5e-48
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              196   5e-48
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   196   5e-48
ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ric...   189   6e-46
ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   187   3e-45

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  196 bits (498), Expect = 5e-48
 Identities = 99/128 (77%), Positives = 113/128 (88%)
 Frame = +1

Query: 382 EAPSVSSAIDLPQKQTSQTSVKSKPRKQRVIKQLYPPTGKSVLVVESVTKAKVIQGYLGD 561
           ++P V++  + P+KQT  T  K K  +QR +K+LYP +GKSV+VVESVTKAKVIQGYLGD
Sbjct: 343 KSPKVAN--ESPKKQTVHTMGKIKSLEQRPLKKLYPSSGKSVVVVESVTKAKVIQGYLGD 400

Query: 562 MFEVIPSYGHVRDLAARSGSVRPDEDFSMVWEVPSAAWTHLKSIKVALSGAENLILASDP 741
           M+EV+PSYGHVRDLA RSGSVRPD+DFSMVWEVPSAAWTHLKSIKVAL GAENLILASDP
Sbjct: 401 MYEVLPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAENLILASDP 460

Query: 742 DREGEAIA 765
           DREGEAIA
Sbjct: 461 DREGEAIA 468


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  196 bits (498), Expect = 5e-48
 Identities = 99/128 (77%), Positives = 113/128 (88%)
 Frame = +1

Query: 382 EAPSVSSAIDLPQKQTSQTSVKSKPRKQRVIKQLYPPTGKSVLVVESVTKAKVIQGYLGD 561
           ++P V++  + P+KQT  T  K K  +QR +K+LYP +GKSV+VVESVTKAKVIQGYLGD
Sbjct: 57  KSPKVAN--ESPKKQTVHTMGKIKSLEQRPLKKLYPSSGKSVVVVESVTKAKVIQGYLGD 114

Query: 562 MFEVIPSYGHVRDLAARSGSVRPDEDFSMVWEVPSAAWTHLKSIKVALSGAENLILASDP 741
           M+EV+PSYGHVRDLA RSGSVRPD+DFSMVWEVPSAAWTHLKSIKVAL GAENLILASDP
Sbjct: 115 MYEVLPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAENLILASDP 174

Query: 742 DREGEAIA 765
           DREGEAIA
Sbjct: 175 DREGEAIA 182


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  196 bits (498), Expect = 5e-48
 Identities = 99/128 (77%), Positives = 113/128 (88%)
 Frame = +1

Query: 382 EAPSVSSAIDLPQKQTSQTSVKSKPRKQRVIKQLYPPTGKSVLVVESVTKAKVIQGYLGD 561
           ++P V++  + P+KQT  T  K K  +QR +K+LYP +GKSV+VVESVTKAKVIQGYLGD
Sbjct: 356 KSPKVAN--ESPKKQTVHTMGKIKSLEQRPLKKLYPSSGKSVVVVESVTKAKVIQGYLGD 413

Query: 562 MFEVIPSYGHVRDLAARSGSVRPDEDFSMVWEVPSAAWTHLKSIKVALSGAENLILASDP 741
           M+EV+PSYGHVRDLA RSGSVRPD+DFSMVWEVPSAAWTHLKSIKVAL GAENLILASDP
Sbjct: 414 MYEVLPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAENLILASDP 473

Query: 742 DREGEAIA 765
           DREGEAIA
Sbjct: 474 DREGEAIA 481


>ref|XP_002528003.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223532629|gb|EEF34415.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 1071

 Score =  189 bits (480), Expect = 6e-46
 Identities = 95/118 (80%), Positives = 104/118 (88%), Gaps = 1/118 (0%)
 Frame = +1

Query: 415 PQKQTSQTSV-KSKPRKQRVIKQLYPPTGKSVLVVESVTKAKVIQGYLGDMFEVIPSYGH 591
           P KQ     + KSKP +Q  +K LYPPT KSV+VVESVTKAKVIQGYLG MFEV+PSYGH
Sbjct: 260 PDKQQQHKPMHKSKPFRQGSLKPLYPPTAKSVVVVESVTKAKVIQGYLGPMFEVLPSYGH 319

Query: 592 VRDLAARSGSVRPDEDFSMVWEVPSAAWTHLKSIKVALSGAENLILASDPDREGEAIA 765
           VRDLAARSGSVRPD+DFSMVWEVPS AWTHLK+IKVAL+GAENL+LASDPDREGEAIA
Sbjct: 320 VRDLAARSGSVRPDDDFSMVWEVPSPAWTHLKTIKVALNGAENLVLASDPDREGEAIA 377


>ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1070

 Score =  187 bits (474), Expect = 3e-45
 Identities = 114/249 (45%), Positives = 143/249 (57%), Gaps = 2/249 (0%)
 Frame = +1

Query: 25  QKKSVDATATATTNAEVQPKVSKSTTQKKNMKVAQSDQVSLESESAAVQPXXXXXXXXXX 204
           +KK   ++  A +  E +  V K T ++K     Q D     S+ ++             
Sbjct: 154 EKKKKGSSRAAASGEEDEKSVKKKTAKQKKTTSTQEDGAVEASKKSS------------- 200

Query: 205 XXXXXQSDQIPLEPEKSLTDAMTEELVDSSVLXXXXXXXXXXXXXXXXXXXXXXXXXXXE 384
                       + +KSLT++  EE+ ++S                              
Sbjct: 201 ------KGNKKKDSKKSLTESAIEEITENS------------------------------ 224

Query: 385 APSVSSAIDLPQKQTSQTSV--KSKPRKQRVIKQLYPPTGKSVLVVESVTKAKVIQGYLG 558
               +SA D  +K+   +S+  ++KP      K LYPPTGKSV+VVESVTKAKVI+ YLG
Sbjct: 225 ----ASAKDKVKKKNGNSSLIEEAKPLWNFTYKPLYPPTGKSVVVVESVTKAKVIKRYLG 280

Query: 559 DMFEVIPSYGHVRDLAARSGSVRPDEDFSMVWEVPSAAWTHLKSIKVALSGAENLILASD 738
           DM+EV+PSYGHVRDLAARSGSVRPD+DFSMVWEVPS AWTHLKSIKVALSGAENLILASD
Sbjct: 281 DMYEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSPAWTHLKSIKVALSGAENLILASD 340

Query: 739 PDREGEAIA 765
           PDREGEAIA
Sbjct: 341 PDREGEAIA 349