BLASTX nr result

ID: Cnidium21_contig00041079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041079
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591456.1| hypothetical protein MTR_1g087730 [Medicago ...    50   7e-11
ref|XP_002467994.1| hypothetical protein SORBIDRAFT_01g037750 [S...    47   3e-07

>ref|XP_003591456.1| hypothetical protein MTR_1g087730 [Medicago truncatula]
           gi|355480504|gb|AES61707.1| hypothetical protein
           MTR_1g087730 [Medicago truncatula]
          Length = 106

 Score = 50.1 bits (118), Expect(2) = 7e-11
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = +3

Query: 501 SSAGERRLEIMSGKVFTRNQMYSSPDMTTISTRVNRLSQVASSPPLKPWVFNDPGMKRKK 680
           S   ERR+EI+SG+ +  +Q Y     +  +  V R S   ++P  KPW FND   KR+K
Sbjct: 12  SFGSERRIEIVSGRSYGFSQSYYV-GRSESTGEVTRASHDGAAPVAKPWSFNDAATKRRK 70

Query: 681 SIAKYK 698
            IA+YK
Sbjct: 71  RIARYK 76



 Score = 43.5 bits (101), Expect(2) = 7e-11
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +2

Query: 698 IYTIEDRFKASFRSGFRWIKNKCSEFIHDY 787
           +Y +E + KA+FR+G RWIK+ CS  +H Y
Sbjct: 77  VYAVEGKVKATFRNGIRWIKHTCSRIVHGY 106


>ref|XP_002467994.1| hypothetical protein SORBIDRAFT_01g037750 [Sorghum bicolor]
           gi|241921848|gb|EER94992.1| hypothetical protein
           SORBIDRAFT_01g037750 [Sorghum bicolor]
          Length = 179

 Score = 47.0 bits (110), Expect(2) = 3e-07
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = +2

Query: 701 YTIEDRFKASFRSGFRWIKNKCSEFIHDY 787
           Y++E + KASFR GFRWIK KCSE IH +
Sbjct: 90  YSVEGKVKASFRRGFRWIKAKCSELIHGW 118



 Score = 34.3 bits (77), Expect(2) = 3e-07
 Identities = 21/63 (33%), Positives = 31/63 (49%)
 Frame = +3

Query: 510 GERRLEIMSGKVFTRNQMYSSPDMTTISTRVNRLSQVASSPPLKPWVFNDPGMKRKKSIA 689
           G+RRL+I+      +    S P    +STR        S+     W F+DP MKR++ +A
Sbjct: 36  GDRRLDIV-----VKPPARSPPPPLPVSTRSGGSGGAGSA-----WCFSDPEMKRRRRVA 85

Query: 690 KYK 698
            YK
Sbjct: 86  SYK 88


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