BLASTX nr result

ID: Cnidium21_contig00041077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041077
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    80   3e-13
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    69   1e-09
gb|AAU93581.1| Putative F-box protein, identical [Solanum demiss...    67   2e-09
ref|XP_003598106.1| F-box/kelch-repeat protein [Medicago truncat...    65   2e-08
gb|ADZ74124.1| S-haplotype-specific F-box protein [Prunus pseudo...    64   3e-08

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
 Frame = -1

Query: 595 MASTLPEELLSRIFLLQPLKTVGQLSCVCKSWNQVINSKYFIKTHATHQISSSNVNKYVV 416
           M   +P+E+L +IFL  P+K + +  C+CK+W  +I++  FI TH+ + I S+N N Y++
Sbjct: 1   MLDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNN-NNYLI 59

Query: 415 IDHSPTPPPFLNQYNIGSYNVLESYIYDADDIFGR--------DSDFNCLEIYGICDGVL 260
           + H          Y+  +     +  +D DD+F          +S ++  EI G C+G++
Sbjct: 60  LRH----------YSRSNKKERFALHFDDDDMFSEYQELDFPLESSWDYFEIVGSCNGII 109

Query: 259 CLSENYLYWQHSNHRIFLWNXXXXXXXXXXXXXFELQVERRGSPCLCFG--RHDDDYKVI 86
           CL++N+    H   RI LWN                +V    +  L FG     +DYKVI
Sbjct: 110 CLTDNH---SHILKRIVLWNPSIGLSVTLPLQRISYKV---SNVVLGFGFDSRTNDYKVI 163

Query: 85  FI-------NPLQNVYHVFIYSLSTNSW 23
            I       + L     V I+ LS  +W
Sbjct: 164 RIVYYSTNDDSLMVPPEVEIFELSRGTW 191


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 58/208 (27%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
 Frame = -1

Query: 595 MASTLPEELLSRIFLLQPLKTVGQLSCVCKSWNQVINSKYFIKTHATHQISSSN-VNKYV 419
           M   +P+E+L  I    P+K++ +  CVC+SW+ +I +  FI TH  H I  +N V+ Y 
Sbjct: 1   MLENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYA 60

Query: 418 VIDHSPTPPPFLNQYNIGSYNVLESYIYDADDIFG-------RDSDF-----NCLEIYGI 275
           ++     P            +  E +I   DD  G       ++ DF       LEI   
Sbjct: 61  LVKQKSVP------------DCKERFILYIDDDSGDEPFRVYQELDFPFKGERYLEIISS 108

Query: 274 CDGVLCLSENYLYWQHSNHRIFLWNXXXXXXXXXXXXXFELQVERRGSPCLCFGRHDDDY 95
           C+G++CLS++    Q++  R +LWN                 V         F    +DY
Sbjct: 109 CNGLVCLSDS----QYA--RFYLWNPVIRKCLTILSSDSSFIVG------FGFEYKKNDY 156

Query: 94  KVIFI----NPLQNVYHVFIYSLSTNSW 23
           KV+ I      +  V  V IY LST++W
Sbjct: 157 KVVKIMHHPEKMNPVLIVKIYDLSTSAW 184


>gb|AAU93581.1| Putative F-box protein, identical [Solanum demissum]
           gi|142942419|gb|ABO92994.1| F-box domain-containing
           protein [Solanum tuberosum]
          Length = 383

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
 Frame = -1

Query: 601 TIMASTLPEELLSRIFLLQPLKTVGQLSCVCKSWNQVINSKYFIKTHAT----------H 452
           +I+   LP+EL++ I L  P+K++ +  CV KSW Q+I+S  F+K H            H
Sbjct: 5   SIIPLLLPDELITEILLRLPIKSLSKFMCVSKSWLQLISSPAFVKKHIKLTANDKGYIYH 64

Query: 451 QISSSNVNKYVVIDHSPTPPPFLNQYNIGSYNVLESYIYDADDIFGRDSDFNCLEIYGIC 272
           ++   N N        P PP F NQ  I     ++S I         +       I G  
Sbjct: 65  RLIFRNTNN--DFKFCPLPPLFTNQQLIEEILHIDSPI---------ERTTLSTHIVGSV 113

Query: 271 DGVLCLSENYLYWQHSNHR-IFLWNXXXXXXXXXXXXXFELQVERRGSPC-LCFGRHDDD 98
           +G++C++       H   R  ++WN               L  +  G  C   +    DD
Sbjct: 114 NGLICVA-------HVRQREAYIWNPAITKSKELPKSTSNLCSD--GIKCGFGYDESRDD 164

Query: 97  YKVIFIN-PLQNVYH--VFIYSLSTNSWEFL 14
           YKV+FI+ P+++ +   V IYSL TNSW  L
Sbjct: 165 YKVVFIDYPIRHNHRTVVNIYSLRTNSWTTL 195


>ref|XP_003598106.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487154|gb|AES68357.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 397

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 61/207 (29%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
 Frame = -1

Query: 586 TLPEELLSRIFLLQPLKTVGQLSCVCKSWNQVINSKYFIK-------THATHQISSSNVN 428
           TLP EL+  I    P+K + QL C CKSWN +I+   F K       TH  H I+ S  N
Sbjct: 49  TLPFELIEEILSRLPVKLLLQLRCSCKSWNSLISDPKFAKKHLSLSTTHNVHCITYS--N 106

Query: 427 KYVVIDHSPTPPPFLNQYNIGSYNVLESYIYDADDIFGRDSDFNCLEIYGICDGVLCLSE 248
           KY++I+  P          I + N+ +SY+  +   +            G CDG+LCL+ 
Sbjct: 107 KYIIIESYPLD-------TITATNIAQSYLPFSHSAY----------FLGSCDGILCLAA 149

Query: 247 NYLYWQHSNHRIF-LWNXXXXXXXXXXXXXFELQVERRGSPCLCFGRH--DDDYKVIF-- 83
                  SN  I  LWN              E + ++       FG     D+YKV+   
Sbjct: 150 A----DDSNSIIVRLWN-PSIRKDKELPLLQEPKKQKHVMRMYGFGYDPVGDNYKVVVFL 204

Query: 82  ------INPLQNVYHVFIYSLSTNSWE 20
                 I+   + Y V +++L T+SWE
Sbjct: 205 RLIDSNISNFVDKYKVKVHTLGTSSWE 231


>gb|ADZ74124.1| S-haplotype-specific F-box protein [Prunus pseudocerasus]
          Length = 373

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 14/209 (6%)
 Frame = -1

Query: 595 MASTLPE-ELLSRIFLLQPLKTVGQLSCVCKSWNQVINSKYFIKTHATHQISSSNVNKYV 419
           M STL E ++L  I +  P K++ +  C CKSW+ +I S  F+ TH    + + + + Y+
Sbjct: 1   MVSTLCEKQILIDILVRLPAKSLVRFLCTCKSWSDLIGSPSFVSTHLYRNV-TKHAHVYL 59

Query: 418 VIDHSPTPPPFLN----------QYNIGSYNVLESYIYDADDIFGRDSDFNCLEIYGICD 269
           +  H P     +N          Q+++ S    E   Y      G    +    IYG  +
Sbjct: 60  LCLHHPDFERLVNPDDPYVKKEFQWSLFSSETFEE-CYKLSHPLGNTEYYG---IYGSSN 115

Query: 268 GVLCLSENYLYWQHSNHRIFLWNXXXXXXXXXXXXXFELQVERRGSPCLCFGRHD--DDY 95
           G++C+S+  L +    H   +WN               + + + GS  L FG H   +DY
Sbjct: 116 GLVCISDEILNFDSPIH---IWN-PSVRKFRALPMSTNINI-KFGSVALQFGFHPRVNDY 170

Query: 94  KVI-FINPLQNVYHVFIYSLSTNSWEFLK 11
           K++  +   ++   V +YSL TNSW+ ++
Sbjct: 171 KIVRMLRTNKDALAVEVYSLRTNSWKMIE 199


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