BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00041016
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   102   3e-20
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...    91   1e-16
ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis ...    90   2e-16
ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabid...    89   4e-16
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...    89   4e-16

>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/94 (55%), Positives = 63/94 (67%)
 Frame = +3

Query: 3   SSIHVNVFSGEXXXXXXXXXXXXRGGILADAMGLGKTVMTISLILARSGRGIPEAKHGDT 182
           +SI+VN+FSGE            RGGILADAMGLGKTVMTI+LILAR G+G P+ +    
Sbjct: 497 TSIYVNIFSGESTTKFPTATQMARGGILADAMGLGKTVMTIALILARMGKGCPDNQKSTV 556

Query: 183 ENLVSKGTESNRVPRKARGGTHIICPMVLLGQWK 284
              V+   +S +   KARGGT I+CPM LLGQWK
Sbjct: 557 NKKVTTEKKSQKSTTKARGGTLIVCPMALLGQWK 590


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1051

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/94 (53%), Positives = 60/94 (63%)
 Frame = +3

Query: 3   SSIHVNVFSGEXXXXXXXXXXXXRGGILADAMGLGKTVMTISLILARSGRGIPEAKHGDT 182
           SSI++N+FSGE            RGGILADAMGLGKTVMTISLILAR G+G         
Sbjct: 448 SSIYLNIFSGEATTQFPTATQMARGGILADAMGLGKTVMTISLILARPGKG--------- 498

Query: 183 ENLVSKGTESNRVPRKARGGTHIICPMVLLGQWK 284
               S  ++ +   +KA+GGT I+CPM LLGQWK
Sbjct: 499 ----SIDSQESTNTKKAKGGTLIVCPMALLGQWK 528


>ref|XP_002865418.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311253|gb|EFH41677.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1305

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 51/98 (52%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
 Frame = +3

Query: 6   SIHVNVFSGEXXXXXXXXXXXXRGGILADAMGLGKTVMTISLILARSGRGIPEAKHG--- 176
           SI++N+FSGE            RGGILADAMGLGKTVMTI+LILAR GRG P  + G   
Sbjct: 687 SIYLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPGNEDGLAA 746

Query: 177 --DTENLVSKGTESNRVPRKARGGTHIICPMVLLGQWK 284
             + +    K + +     KA+GGT IICPM LL QWK
Sbjct: 747 DVNADKRKRKESHTALTIVKAKGGTLIICPMALLSQWK 784


>ref|NP_199166.1| Helicase protein with RING/U-box domain [Arabidopsis thaliana]
           gi|60390960|sp|Q9FIY7.1|SM3L3_ARATH RecName:
           Full=Putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3; Short=SMARCA3-like protein 3
           gi|10178192|dbj|BAB11616.1| DNA repair protein-like
           [Arabidopsis thaliana] gi|332007595|gb|AED94978.1|
           Helicase protein with RING/U-box domain [Arabidopsis
           thaliana]
          Length = 1277

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/100 (53%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
 Frame = +3

Query: 6   SIHVNVFSGEXXXXXXXXXXXXRGGILADAMGLGKTVMTISLILARSGRGIPEAK----- 170
           SI++N+FSGE            RGGILADAMGLGKTVMTI+LILAR GRG PE +     
Sbjct: 659 SIYLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPENEDVLVA 718

Query: 171 --HGDTENLVSKGTESNRVPRKARGGTHIICPMVLLGQWK 284
             + D  N   K         KA+GGT IICPM LL QWK
Sbjct: 719 DVNADKRN--RKEIHMALTTVKAKGGTLIICPMALLSQWK 756


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Vitis vinifera]
          Length = 1224

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
 Frame = +3

Query: 3   SSIHVNVFSGEXXXXXXXXXXXXRGGILADAMGLGKTVMTISLILARSGR---GIPE--A 167
           S+I+VN+FSGE            RGGILADAMGLGKTVMTI+LILAR GR   G+ +   
Sbjct: 602 SAIYVNIFSGEATTQLPTAIHMARGGILADAMGLGKTVMTIALILARPGRRSSGVHKLLT 661

Query: 168 KHGDTENLVSKGTESN-RVPRKARGGTHIICPMVLLGQWK 284
           +  D      K T+S+ + P   +GGT I+CPM LL QWK
Sbjct: 662 EAADDTEEAEKNTDSHTKAPLNVKGGTLIVCPMALLSQWK 701