BLASTX nr result

ID: Cnidium21_contig00040989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040989
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72133.1| hypothetical protein VITISV_042261 [Vitis vinifera]    90   2e-16
ref|XP_003541006.1| PREDICTED: uncharacterized protein LOC100785...    88   8e-16
ref|XP_002533882.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
ref|XP_002263729.1| PREDICTED: uncharacterized protein LOC100268...    86   4e-15
ref|XP_002328705.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12

>emb|CAN72133.1| hypothetical protein VITISV_042261 [Vitis vinifera]
          Length = 396

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
 Frame = -2

Query: 308 LSHHSKTL--AVSAVSG-HLKLPTTATKFIDKYPSVFNHFLSLKPLSHPQVRLTKQALSL 138
           LS  SKTL  AV+AV+    +LPTTA  F  KYPSVF  F   KPLS PQVRLT QA++L
Sbjct: 55  LSAPSKTLPAAVAAVNKPQFRLPTTALNFFHKYPSVFRIFQP-KPLSXPQVRLTPQAIAL 113

Query: 137 HKLETFILNSPKGKIDSAERLVKLLMLTKRKKLPLFVIDKLKFDL 3
           H  E  +  SP+   ++AERL KLLML   ++LPL ++D  +FDL
Sbjct: 114 HNEELAVHASPERLQEAAERLAKLLMLAGARRLPLRIVDCFRFDL 158


>ref|XP_003541006.1| PREDICTED: uncharacterized protein LOC100785998 [Glycine max]
          Length = 357

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
 Frame = -2

Query: 308 LSHHSKTLAV---SAVSGHLKLPTTATKFIDKYPSVFNHFLSLKPLSHPQVRLTKQALSL 138
           +S  SK+L++   S +   L LPTT TKF+DKY  VF+ F    P   P V+LT  ALSL
Sbjct: 51  ISSPSKSLSIYTASQLKASLNLPTTTTKFVDKYHCVFSQFQP-GPGLPPVVKLTPLALSL 109

Query: 137 HKLETFILNSPKGKIDSAERLVKLLMLTKRKKLPLFVIDKLKFDL 3
           HK E  + NSP  + D+ +RL +LLML    KLPL+VI+KLK+D+
Sbjct: 110 HKEEMAVHNSPINREDTVQRLARLLMLAGMSKLPLYVIEKLKWDM 154


>ref|XP_002533882.1| conserved hypothetical protein [Ricinus communis]
           gi|223526167|gb|EEF28500.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/105 (47%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
 Frame = -2

Query: 308 LSHHSKTLAVSAVS---GHLKLPTTATKFIDKYPSVFNHFLSLKPLSHPQVRLTKQALSL 138
           +S  SKT+++S++S    H  L  TA KF++ YPS+F HF    P     V+LT QALS+
Sbjct: 56  ISSPSKTVSLSSLSLLKTHFNLSNTAHKFLENYPSLFTHFQP-SPSLPLHVKLTHQALSI 114

Query: 137 HKLETFILNSPKGKIDSAERLVKLLMLTKRKKLPLFVIDKLKFDL 3
           HK E  + +S   + D+ ++L KLLMLTK  +LPL VID+LKFDL
Sbjct: 115 HKEEQLVYSSFSYRDDAVKKLAKLLMLTKVSRLPLHVIDRLKFDL 159


>ref|XP_002263729.1| PREDICTED: uncharacterized protein LOC100268137 [Vitis vinifera]
          Length = 396

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 54/105 (51%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
 Frame = -2

Query: 308 LSHHSKTL--AVSAVSG-HLKLPTTATKFIDKYPSVFNHFLSLKPLSHPQVRLTKQALSL 138
           LS  SKTL  AV+AV+    +LPTTA  F  KYPSVF  F   KPLS P VRLT QA++L
Sbjct: 55  LSAPSKTLPAAVAAVNKPQFRLPTTALNFFHKYPSVFRIFQP-KPLSTPHVRLTPQAIAL 113

Query: 137 HKLETFILNSPKGKIDSAERLVKLLMLTKRKKLPLFVIDKLKFDL 3
           H  E  +  SP    ++AERL K LML   ++LPL ++D  +FDL
Sbjct: 114 HNEELAVHASPARLQEAAERLAKFLMLAGARRLPLRIVDCFRFDL 158


>ref|XP_002328705.1| predicted protein [Populus trichocarpa] gi|222839003|gb|EEE77354.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/105 (41%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
 Frame = -2

Query: 308 LSHHSKTLAVSAVS---GHLKLPTTATKFIDKYPSVFNHFLSLKPLSHPQVRLTKQALSL 138
           +S  SK+L +S++S    +  + TTA  F  KY +VF+ F     L    ++LT QA+SL
Sbjct: 52  ISSPSKSLPLSSLSLLKPYFNISTTALNFFHKYSTVFSQFQPSPSLPF-HIKLTPQAISL 110

Query: 137 HKLETFILNSPKGKIDSAERLVKLLMLTKRKKLPLFVIDKLKFDL 3
           HK E  IL S   + D+ +RL KLLML+  K+LPL ++D+ K+DL
Sbjct: 111 HKEEQLILKSQPLRDDTIKRLAKLLMLSGAKRLPLHIVDRFKYDL 155


Top