BLASTX nr result

ID: Cnidium21_contig00040960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040960
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002509884.1| prenyl-dependent CAAX protease, putative [Ri...    95   7e-18
ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250...    94   9e-18
ref|XP_003533015.1| PREDICTED: uncharacterized protein LOC100814...    93   3e-17

>ref|XP_002298001.1| predicted protein [Populus trichocarpa] gi|222845259|gb|EEE82806.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/62 (72%), Positives = 51/62 (82%)
 Frame = -1

Query: 187 AAWMMGFNKATLTFRGQAFLSLLTDVMEGFAGAAILYHCLSRFRPLPSEWFRFSLKGNWL 8
           AA + GFNK +LTFRGQA  SL+TDV EG AG AIL+ CLSRFRPL S+WFRF LKGNW+
Sbjct: 98  AAHIAGFNKESLTFRGQALFSLVTDVTEGLAGIAILHRCLSRFRPLSSDWFRFRLKGNWV 157

Query: 7   FD 2
           FD
Sbjct: 158 FD 159


>ref|XP_002304526.1| predicted protein [Populus trichocarpa] gi|222841958|gb|EEE79505.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/62 (72%), Positives = 50/62 (80%)
 Frame = -1

Query: 187 AAWMMGFNKATLTFRGQAFLSLLTDVMEGFAGAAILYHCLSRFRPLPSEWFRFSLKGNWL 8
           AA + GFNK +LTFRGQA  SL+TDV EG AG AIL+ CLSRF PL S+WFRF LKGNWL
Sbjct: 141 AAHIAGFNKESLTFRGQALFSLVTDVTEGLAGIAILHCCLSRFHPLSSDWFRFRLKGNWL 200

Query: 7   FD 2
           FD
Sbjct: 201 FD 202


>ref|XP_002509884.1| prenyl-dependent CAAX protease, putative [Ricinus communis]
           gi|223549783|gb|EEF51271.1| prenyl-dependent CAAX
           protease, putative [Ricinus communis]
          Length = 355

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/59 (74%), Positives = 49/59 (83%)
 Frame = -1

Query: 187 AAWMMGFNKATLTFRGQAFLSLLTDVMEGFAGAAILYHCLSRFRPLPSEWFRFSLKGNW 11
           AA + GFNK +LTFRGQA  SL+TDV EG AG AIL+ CLSRF PLPS+WFRFSLKGNW
Sbjct: 151 AAHIAGFNKESLTFRGQALFSLVTDVTEGLAGIAILHRCLSRFCPLPSDWFRFSLKGNW 209


>ref|XP_002276929.1| PREDICTED: uncharacterized protein LOC100250094 [Vitis vinifera]
           gi|297742264|emb|CBI34413.3| unnamed protein product
           [Vitis vinifera]
          Length = 347

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = -1

Query: 184 AWMMGFNKATLTFRGQAFLSLLTDVMEGFAGAAILYHCLSRFRPLPSEWFRFSLKGNWLF 5
           A ++GF+K +LT+RGQA  SLLTDV EG AG AIL+ CLSRF PLPS+WFRFSL+GNWL 
Sbjct: 146 AHVVGFSKESLTYRGQALYSLLTDVAEGLAGIAILHRCLSRFSPLPSDWFRFSLRGNWLA 205

Query: 4   D 2
           D
Sbjct: 206 D 206



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 24/48 (50%), Positives = 33/48 (68%)
 Frame = -3

Query: 473 DFLESEFTKPSSSKRDLVMNLRKAVDVVRGTIDKPWAVPWTLETILQV 330
           + ++ EF KPS+ ++D   + R+A DV+   I KPW VPWT ETILQV
Sbjct: 79  ELVKPEFNKPSTVQKDWASSFREAADVILRVIGKPWVVPWTSETILQV 126


>ref|XP_003533015.1| PREDICTED: uncharacterized protein LOC100814248 [Glycine max]
          Length = 341

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/62 (69%), Positives = 48/62 (77%)
 Frame = -1

Query: 187 AAWMMGFNKATLTFRGQAFLSLLTDVMEGFAGAAILYHCLSRFRPLPSEWFRFSLKGNWL 8
           AA + GF+K +LTFRGQA  SL+TDV EG AG AIL  CLSRFRPLP +WF FSLKGNW 
Sbjct: 139 AAHITGFSKESLTFRGQALFSLVTDVTEGLAGVAILLRCLSRFRPLPPDWFEFSLKGNWQ 198

Query: 7   FD 2
            D
Sbjct: 199 LD 200


Top