BLASTX nr result

ID: Cnidium21_contig00040949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040949
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Gl...   146   1e-33
ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cu...   144   6e-33
ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vi...   144   6e-33
ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Gl...   140   1e-31
ref|XP_002534044.1| Auxin response factor, putative [Ricinus com...   139   2e-31

>ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 670

 Score =  146 bits (369), Expect = 1e-33
 Identities = 80/134 (59%), Positives = 91/134 (67%), Gaps = 3/134 (2%)
 Frame = -3

Query: 394 NFVNQKKLVAGDSIVFLRADNGDLCVXXXXXXXXXXXGLELPCGWNTTNCAPRFGGFLGH 215
           +FVNQKKLVAGDSIVFLRA+NGDLCV           G E PCGW++       GG    
Sbjct: 181 SFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGS----GGLGLG 236

Query: 214 ASGAFDG---GENGTRKVSGESVSEVATRVAEGKAFEVVYYPRASTPEFFVKASSVKAAM 44
             GAF G    E+G  KVSGESV E  T  A  +AFEVVYYPRA+TPEF ++ S+V+ AM
Sbjct: 237 PYGAFSGFMREESGRAKVSGESVREAVTLAASNQAFEVVYYPRANTPEFCIRTSAVRGAM 296

Query: 43  RIQWCSGMRFKMPF 2
           RIQWCSGMRFKMPF
Sbjct: 297 RIQWCSGMRFKMPF 310


>ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
           gi|449531181|ref|XP_004172566.1| PREDICTED: auxin
           response factor 18-like [Cucumis sativus]
          Length = 716

 Score =  144 bits (364), Expect = 6e-33
 Identities = 83/146 (56%), Positives = 89/146 (60%), Gaps = 16/146 (10%)
 Frame = -3

Query: 391 FVNQKKLVAGDSIVFLRADNGDLCVXXXXXXXXXXXGLELPCGWNTT--NCAPRFGGFL- 221
           FVNQKKLVAGDSIVFLR+ NGDLCV             + P GWN    NC P +GG   
Sbjct: 184 FVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCASDHPYGWNPGGGNCIPPYGGLTM 243

Query: 220 ------------GHASGAFDGGE-NGTRKVSGESVSEVATRVAEGKAFEVVYYPRASTPE 80
                       G  S +  GG   G  KV  ESV E A   A G+ FEVVYYPRASTPE
Sbjct: 244 FLRDDDNKLSRKGSLSSSGSGGNLRGKGKVRPESVMEAAALAASGQPFEVVYYPRASTPE 303

Query: 79  FFVKASSVKAAMRIQWCSGMRFKMPF 2
           F VKASSV+AAMRIQWCSGMRFKMPF
Sbjct: 304 FCVKASSVRAAMRIQWCSGMRFKMPF 329


>ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  144 bits (364), Expect = 6e-33
 Identities = 81/143 (56%), Positives = 91/143 (63%), Gaps = 13/143 (9%)
 Frame = -3

Query: 391 FVNQKKLVAGDSIVFLRADNGDLCVXXXXXXXXXXXGLELPCGWNTTNCAPRFGGFL--- 221
           FVNQKKLVAGDSIVFLRA+NGDLCV           G E P GWN  +    F  FL   
Sbjct: 183 FVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFPKFLRED 242

Query: 220 ----------GHASGAFDGGENGTRKVSGESVSEVATRVAEGKAFEVVYYPRASTPEFFV 71
                     G+++    GG  G R+V  ESV E AT  A G+ FEVVYYPRASTPEF V
Sbjct: 243 ESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCV 302

Query: 70  KASSVKAAMRIQWCSGMRFKMPF 2
           KAS V++A+RIQWCSGMRFKMPF
Sbjct: 303 KASGVRSAVRIQWCSGMRFKMPF 325


>ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 608

 Score =  140 bits (352), Expect = 1e-31
 Identities = 81/140 (57%), Positives = 90/140 (64%), Gaps = 9/140 (6%)
 Frame = -3

Query: 394 NFVNQKKLVAGDSIVFLRADNGDLCVXXXXXXXXXXXGLELPCGWNTTNCAPRFGGFLGH 215
           NFVNQK+LVAGDSIVFLRA+NGDLCV           G E   GWN     P FGG  G 
Sbjct: 190 NFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWNN----PLFGGGGGF 245

Query: 214 --------ASGAFDGGENG-TRKVSGESVSEVATRVAEGKAFEVVYYPRASTPEFFVKAS 62
                    SGA  GG++    +V+ ESV E  T    G+ FEVVYYPRAS+PEF VKAS
Sbjct: 246 LCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYYPRASSPEFCVKAS 305

Query: 61  SVKAAMRIQWCSGMRFKMPF 2
            VKAAM+IQWCSGMRFKMPF
Sbjct: 306 VVKAAMQIQWCSGMRFKMPF 325


>ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
           gi|223525942|gb|EEF28340.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 590

 Score =  139 bits (350), Expect = 2e-31
 Identities = 78/141 (55%), Positives = 90/141 (63%), Gaps = 10/141 (7%)
 Frame = -3

Query: 394 NFVNQKKLVAGDSIVFLRADNGDLCVXXXXXXXXXXXGLELPCGWNTTNCAPRFGGFLGH 215
           NFVNQKKLVAGDSIVFLRADNGDLCV           G E P GWN+         F G+
Sbjct: 199 NFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWNS---------FGGY 249

Query: 214 ASGAF----------DGGENGTRKVSGESVSEVATRVAEGKAFEVVYYPRASTPEFFVKA 65
           A+G            +G  +   KV  ESV + AT  A G+ FE+VYYPRASTPEF V+A
Sbjct: 250 AAGFLREDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYYPRASTPEFCVRA 309

Query: 64  SSVKAAMRIQWCSGMRFKMPF 2
           S+V+AAM+IQWC GMRFKMPF
Sbjct: 310 SAVRAAMQIQWCPGMRFKMPF 330


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