BLASTX nr result

ID: Cnidium21_contig00040929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040929
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544797.1| PREDICTED: uncharacterized protein LOC100788...    78   7e-13
ref|XP_003615131.1| RNA-binding protein [Medicago truncatula] gi...    72   5e-11
ref|XP_003634414.1| PREDICTED: uncharacterized protein LOC100253...    70   1e-10
gb|ACR34305.1| unknown [Zea mays] gi|413938540|gb|AFW73091.1| RN...    62   4e-08
ref|NP_001150704.1| LOC100284337 [Zea mays] gi|195641226|gb|ACG4...    62   4e-08

>ref|XP_003544797.1| PREDICTED: uncharacterized protein LOC100788516 [Glycine max]
          Length = 274

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/108 (43%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
 Frame = -2

Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASLXXXXXXXXXXXXXGYHGEGV-PSSSY 145
           GFVTFR  ESA RACA+PNPVIDGR+ANCNIASL                G  V  ++SY
Sbjct: 60  GFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTFQGGAPVTAAASY 119

Query: 144 SGVXXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYHQ-GMYNPQLQQQQ 4
            GV                           +YGYHQ  +YNPQ+QQ Q
Sbjct: 120 GGVPAAGPPALAPPPPPLVYPPYGYPTYTPDYGYHQASLYNPQIQQPQ 167


>ref|XP_003615131.1| RNA-binding protein [Medicago truncatula]
           gi|355516466|gb|AES98089.1| RNA-binding protein
           [Medicago truncatula]
          Length = 283

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 49/112 (43%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
 Frame = -2

Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASLXXXXXXXXXXXXXGYHGEGV---PSS 151
           GFVTFR  ESA RACA+PNPVIDGR+ANCNIASL              Y G GV    ++
Sbjct: 60  GFVTFRDPESARRACADPNPVIDGRRANCNIASL-GRPRPSPPRGRGTYQGGGVGTGAAA 118

Query: 150 SYSGV--XXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYHQG-MYNPQLQQQQ 4
           +Y GV                             EYGY Q  MYNPQ+QQ Q
Sbjct: 119 AYGGVPAGGPPQMAAGAATAPVMYQPYGYPTYTPEYGYPQATMYNPQIQQAQ 170


>ref|XP_003634414.1| PREDICTED: uncharacterized protein LOC100253997 [Vitis vinifera]
           gi|302141968|emb|CBI19171.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 48/114 (42%), Positives = 54/114 (47%), Gaps = 10/114 (8%)
 Frame = -2

Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASL---XXXXXXXXXXXXXGYH-GEGVPS 154
           GFVTFR  ESA RAC +PNPVIDGR+ANCNIASL                 YH G    +
Sbjct: 60  GFVTFRDPESARRACVDPNPVIDGRRANCNIASLGRPRPSPPRGRNQGGNPYHAGASQGA 119

Query: 153 SSYSGV-----XXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYH-QGMYNPQLQQ 10
           SS+SGV                                +YGYH Q +YNPQLQQ
Sbjct: 120 SSFSGVPAPLAPPPPPPPPPPPPPPVIYPPYGYATYTPDYGYHQQSLYNPQLQQ 173


>gb|ACR34305.1| unknown [Zea mays] gi|413938540|gb|AFW73091.1| RNA-binding
           region-containing protein 1 [Zea mays]
          Length = 283

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/108 (37%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
 Frame = -2

Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASL---XXXXXXXXXXXXXGYHGEGVPSS 151
           GFVTFR AESAS+AC +P PVIDGR+ANCN+ASL                 Y G  VP +
Sbjct: 76  GFVTFREAESASKACEDPTPVIDGRRANCNLASLGRAQHPVPPGRPRSAGSYLGVPVPKA 135

Query: 150 SYSGVXXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYHQGMYNPQLQQQ 7
            Y G                           +EY Y QG  N    QQ
Sbjct: 136 FYLGGYSHHRPFPLGYYQGFPVPQYSYPSYGTEYIYPQGTLNSYSGQQ 183


>ref|NP_001150704.1| LOC100284337 [Zea mays] gi|195641226|gb|ACG40081.1| RNA-binding
           region-containing protein 1 [Zea mays]
          Length = 283

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 41/108 (37%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
 Frame = -2

Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASL---XXXXXXXXXXXXXGYHGEGVPSS 151
           GFVTFR AESAS+AC +P PVIDGR+ANCN+ASL                 Y G  VP +
Sbjct: 76  GFVTFREAESASKACEDPTPVIDGRRANCNLASLGRAQHPVPPGRPRSAGSYLGVPVPKA 135

Query: 150 SYSGVXXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYHQGMYNPQLQQQ 7
            Y G                           +EY Y QG  N    QQ
Sbjct: 136 FYLGGYSHHRPFPLGYYQGFPVPQYSYPSYGTEYIYPQGTLNSYSGQQ 183


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