BLASTX nr result
ID: Cnidium21_contig00040929
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00040929 (322 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003544797.1| PREDICTED: uncharacterized protein LOC100788... 78 7e-13 ref|XP_003615131.1| RNA-binding protein [Medicago truncatula] gi... 72 5e-11 ref|XP_003634414.1| PREDICTED: uncharacterized protein LOC100253... 70 1e-10 gb|ACR34305.1| unknown [Zea mays] gi|413938540|gb|AFW73091.1| RN... 62 4e-08 ref|NP_001150704.1| LOC100284337 [Zea mays] gi|195641226|gb|ACG4... 62 4e-08 >ref|XP_003544797.1| PREDICTED: uncharacterized protein LOC100788516 [Glycine max] Length = 274 Score = 78.2 bits (191), Expect = 7e-13 Identities = 47/108 (43%), Positives = 54/108 (50%), Gaps = 2/108 (1%) Frame = -2 Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASLXXXXXXXXXXXXXGYHGEGV-PSSSY 145 GFVTFR ESA RACA+PNPVIDGR+ANCNIASL G V ++SY Sbjct: 60 GFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGRGTFQGGAPVTAAASY 119 Query: 144 SGVXXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYHQ-GMYNPQLQQQQ 4 GV +YGYHQ +YNPQ+QQ Q Sbjct: 120 GGVPAAGPPALAPPPPPLVYPPYGYPTYTPDYGYHQASLYNPQIQQPQ 167 >ref|XP_003615131.1| RNA-binding protein [Medicago truncatula] gi|355516466|gb|AES98089.1| RNA-binding protein [Medicago truncatula] Length = 283 Score = 72.0 bits (175), Expect = 5e-11 Identities = 49/112 (43%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Frame = -2 Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASLXXXXXXXXXXXXXGYHGEGV---PSS 151 GFVTFR ESA RACA+PNPVIDGR+ANCNIASL Y G GV ++ Sbjct: 60 GFVTFRDPESARRACADPNPVIDGRRANCNIASL-GRPRPSPPRGRGTYQGGGVGTGAAA 118 Query: 150 SYSGV--XXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYHQG-MYNPQLQQQQ 4 +Y GV EYGY Q MYNPQ+QQ Q Sbjct: 119 AYGGVPAGGPPQMAAGAATAPVMYQPYGYPTYTPEYGYPQATMYNPQIQQAQ 170 >ref|XP_003634414.1| PREDICTED: uncharacterized protein LOC100253997 [Vitis vinifera] gi|302141968|emb|CBI19171.3| unnamed protein product [Vitis vinifera] Length = 276 Score = 70.5 bits (171), Expect = 1e-10 Identities = 48/114 (42%), Positives = 54/114 (47%), Gaps = 10/114 (8%) Frame = -2 Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASL---XXXXXXXXXXXXXGYH-GEGVPS 154 GFVTFR ESA RAC +PNPVIDGR+ANCNIASL YH G + Sbjct: 60 GFVTFRDPESARRACVDPNPVIDGRRANCNIASLGRPRPSPPRGRNQGGNPYHAGASQGA 119 Query: 153 SSYSGV-----XXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYH-QGMYNPQLQQ 10 SS+SGV +YGYH Q +YNPQLQQ Sbjct: 120 SSFSGVPAPLAPPPPPPPPPPPPPPVIYPPYGYATYTPDYGYHQQSLYNPQLQQ 173 >gb|ACR34305.1| unknown [Zea mays] gi|413938540|gb|AFW73091.1| RNA-binding region-containing protein 1 [Zea mays] Length = 283 Score = 62.4 bits (150), Expect = 4e-08 Identities = 41/108 (37%), Positives = 47/108 (43%), Gaps = 3/108 (2%) Frame = -2 Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASL---XXXXXXXXXXXXXGYHGEGVPSS 151 GFVTFR AESAS+AC +P PVIDGR+ANCN+ASL Y G VP + Sbjct: 76 GFVTFREAESASKACEDPTPVIDGRRANCNLASLGRAQHPVPPGRPRSAGSYLGVPVPKA 135 Query: 150 SYSGVXXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYHQGMYNPQLQQQ 7 Y G +EY Y QG N QQ Sbjct: 136 FYLGGYSHHRPFPLGYYQGFPVPQYSYPSYGTEYIYPQGTLNSYSGQQ 183 >ref|NP_001150704.1| LOC100284337 [Zea mays] gi|195641226|gb|ACG40081.1| RNA-binding region-containing protein 1 [Zea mays] Length = 283 Score = 62.4 bits (150), Expect = 4e-08 Identities = 41/108 (37%), Positives = 47/108 (43%), Gaps = 3/108 (2%) Frame = -2 Query: 321 GFVTFRVAESASRACAEPNPVIDGRKANCNIASL---XXXXXXXXXXXXXGYHGEGVPSS 151 GFVTFR AESAS+AC +P PVIDGR+ANCN+ASL Y G VP + Sbjct: 76 GFVTFREAESASKACEDPTPVIDGRRANCNLASLGRAQHPVPPGRPRSAGSYLGVPVPKA 135 Query: 150 SYSGVXXXXXXXXXXXXXXXXXXXXXXXXXPSEYGYHQGMYNPQLQQQ 7 Y G +EY Y QG N QQ Sbjct: 136 FYLGGYSHHRPFPLGYYQGFPVPQYSYPSYGTEYIYPQGTLNSYSGQQ 183