BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040913
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   235   2e-60
ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_002526706.1| pentatricopeptide repeat-containing protein,...   200   9e-50
ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat...   192   2e-47
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t...   192   2e-47

>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  235 bits (600), Expect = 2e-60
 Identities = 113/145 (77%), Positives = 127/145 (87%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           LY++CG L DAHKVF+DI DKNVV WTAIISGYIG+ KF+EAIDMFR LL MNL PDS+T
Sbjct: 156 LYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFT 215

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMS 76
           +VRVLSACTQLGD+N+G WIH+ + ++GM RNVFVGTSLVDMYAK GNME AR VFDGM 
Sbjct: 216 IVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMP 275

Query: 75  EKDIVSWSAMIQGYASNGLPKEALD 1
           EKDIVSW AMIQGYA NGLPKEA+D
Sbjct: 276 EKDIVSWGAMIQGYALNGLPKEAID 300



 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/141 (43%), Positives = 87/141 (61%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           +Y++CG +  A  VF+ + +K++V W A+I GY      KEAID+F  +   N++PD YT
Sbjct: 257 MYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYT 316

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMS 76
           +V VLSAC +LG +  G W+   V       N  +GT+L+D+YAK G+M  A  VF GM 
Sbjct: 317 VVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMK 376

Query: 75  EKDIVSWSAMIQGYASNGLPK 13
           EKD V W+A+I G A NG  K
Sbjct: 377 EKDRVVWNAIISGLAMNGYVK 397



 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/132 (38%), Positives = 76/132 (57%)
 Frame = -1

Query: 396 VFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYTLVRVLSACTQLGD 217
           +F  I   N+  W  +I G +    F +AI+ +  +      P+++T   VL AC +L D
Sbjct: 68  LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127

Query: 216 VNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMSEKDIVSWSAMIQG 37
           +  GV IH  V   G   +VFV TSLV +YAK G +E A +VFD + +K++VSW+A+I G
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISG 187

Query: 36  YASNGLPKEALD 1
           Y   G  +EA+D
Sbjct: 188 YIGVGKFREAID 199



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/133 (25%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           LY++CG +  A +VF+ + +K+ V W AIISG       K +  +F  +  + ++PD  T
Sbjct: 358 LYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNT 417

Query: 255 LVRVLSACTQLGDVNTG-VWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGM 79
            + +L  CT  G V+ G  + +       +  ++     +VD+  ++G ++ A ++   M
Sbjct: 418 FIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNM 477

Query: 78  -SEKDIVSWSAMI 43
             E + + W A++
Sbjct: 478 PMEANAIVWGALL 490


>ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|222868275|gb|EEF05406.1|
           predicted protein [Populus trichocarpa]
          Length = 682

 Score =  202 bits (514), Expect = 2e-50
 Identities = 97/145 (66%), Positives = 115/145 (79%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           LY++CG + +A KVF+DI DKN   WTA ISGY+G+ K +EAIDMFR LL M LRPDS++
Sbjct: 152 LYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFS 211

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMS 76
           LV VLSAC + GD+ +G WI  Y+ + GM RNVFV T+LVD Y K GNME AR VFDGM 
Sbjct: 212 LVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGML 271

Query: 75  EKDIVSWSAMIQGYASNGLPKEALD 1
           EK+IVSWS+MIQGYASNGLPKEALD
Sbjct: 272 EKNIVSWSSMIQGYASNGLPKEALD 296



 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/143 (41%), Positives = 86/143 (60%)
 Frame = -1

Query: 432 YSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYTL 253
           Y +CG +  A  VF+ +++KN+V W+++I GY      KEA+D+F  +L   L+PD Y +
Sbjct: 254 YGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAM 313

Query: 252 VRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMSE 73
           V VL +C +LG +  G W    +       N  +GT+L+DMYAK G M+ A  VF GM +
Sbjct: 314 VGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRK 373

Query: 72  KDIVSWSAMIQGYASNGLPKEAL 4
           KD V W+A I G A +G  K+AL
Sbjct: 374 KDRVVWNAAISGLAMSGHVKDAL 396



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/133 (32%), Positives = 75/133 (56%)
 Frame = -1

Query: 399 KVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYTLVRVLSACTQLG 220
           ++ +   + N+  +  +I G +    F+E+I+++  +    L PDS+T   VL AC ++ 
Sbjct: 63  RILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVL 122

Query: 219 DVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMSEKDIVSWSAMIQ 40
           D   GV +H  V   G + + FV  SL+++Y K G ++ A +VFD + +K+  SW+A I 
Sbjct: 123 DSELGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATIS 182

Query: 39  GYASNGLPKEALD 1
           GY   G  +EA+D
Sbjct: 183 GYVGVGKCREAID 195



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           +Y++CG +  A +VF  +  K+ V W A ISG       K+A+ +F  +    ++PD  T
Sbjct: 354 MYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNT 413

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGT-------SLVDMYAKSGNMEAAR 97
            V +L ACT  G V  G    RY         VF  T        +VD+  ++G ++ A 
Sbjct: 414 FVGLLCACTHAGLVEEG---RRY---FNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAH 467

Query: 96  RVFDGM-SEKDIVSWSAMIQG 37
           ++   M  E + + W A++ G
Sbjct: 468 QLIKSMPMEANAIVWGALLGG 488


>ref|XP_002526706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534006|gb|EEF35728.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 461

 Score =  200 bits (509), Expect = 9e-50
 Identities = 95/145 (65%), Positives = 119/145 (82%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           LY++CG + DA K+ + I + N+V WTAIISGYIG+ K++EAID+FR +L   LRPDS+T
Sbjct: 158 LYAKCGSIDDALKMLDLIPESNIVSWTAIISGYIGVGKYREAIDLFRRMLETGLRPDSFT 217

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMS 76
           +V+VLSAC Q+GD+  G WI RY+ +  M RNVFV TSLVD+YAK GNME AR +FDGM+
Sbjct: 218 IVQVLSACIQIGDLANGEWIDRYITENVMARNVFVTTSLVDLYAKHGNMEKARCLFDGMA 277

Query: 75  EKDIVSWSAMIQGYASNGLPKEALD 1
           E+DIVSWSAMIQGYASNGLPK+ALD
Sbjct: 278 ERDIVSWSAMIQGYASNGLPKDALD 302



 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/143 (37%), Positives = 81/143 (56%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           LY++ G +  A  +F+ + ++++V W+A+I GY      K+A+D+F  +L   L+PD Y 
Sbjct: 259 LYAKHGNMEKARCLFDGMAERDIVSWSAMIQGYASNGLPKDALDLFFKMLNAGLKPDHYA 318

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMS 76
           +V  L AC +LG +  G W    +       N  +GT+L+DMYAK G+M  A  VF G+ 
Sbjct: 319 MVGFLCACARLGALELGDWGSNLMDRTEFFTNHVLGTALIDMYAKCGSMAKAWEVFKGIK 378

Query: 75  EKDIVSWSAMIQGYASNGLPKEA 7
            KD   W+A I G A NG  K A
Sbjct: 379 GKDRAVWNAAISGLAMNGHEKAA 401



 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/132 (34%), Positives = 77/132 (58%)
 Frame = -1

Query: 396 VFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYTLVRVLSACTQLGD 217
           +F  I + +VV +  +I G +    F E+I+ +  +      P+++T   V+ AC +L D
Sbjct: 70  IFNQIKEPDVVLYNTMIRGLVSSDCFTESIEFYYSMRKKGFLPNNFTFPFVIKACARLLD 129

Query: 216 VNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMSEKDIVSWSAMIQG 37
              G+ +H  V  +G   N+FV TSLV +YAK G+++ A ++ D + E +IVSW+A+I G
Sbjct: 130 FQLGIMMHTLVVKLGFDCNLFVNTSLVSLYAKCGSIDDALKMLDLIPESNIVSWTAIISG 189

Query: 36  YASNGLPKEALD 1
           Y   G  +EA+D
Sbjct: 190 YIGVGKYREAID 201


>ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  192 bits (489), Expect = 2e-47
 Identities = 96/145 (66%), Positives = 115/145 (79%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           LYS+ G L DA KVF++I +KNVV WTAII GYI    F EA+ +FRGLL M LRPDS+T
Sbjct: 146 LYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFT 205

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMS 76
           LVR+L AC+++GD+ +G WI  Y+ + G   NVFV TSLVDMYAK G+ME ARRVFDGM 
Sbjct: 206 LVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMV 265

Query: 75  EKDIVSWSAMIQGYASNGLPKEALD 1
           EKD+V WSA+IQGYASNG+PKEALD
Sbjct: 266 EKDVVCWSALIQGYASNGMPKEALD 290



 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/138 (41%), Positives = 87/138 (63%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           +Y++CG + +A +VF+ +V+K+VVCW+A+I GY      KEA+D+F  +   N+RPD Y 
Sbjct: 247 MYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYA 306

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMS 76
           +V V SAC++LG +  G W    +       N  +GT+L+D YAK G++  A+ VF GM 
Sbjct: 307 MVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMR 366

Query: 75  EKDIVSWSAMIQGYASNG 22
            KD V ++A+I G A  G
Sbjct: 367 RKDCVVFNAVISGLAMCG 384



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
 Frame = -1

Query: 396 VFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYTLVRVLSACTQLGD 217
           VF      N+  +  +I G +    F++A+ ++  +      PD++T   VL ACT+L  
Sbjct: 57  VFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPH 116

Query: 216 V-NTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMSEKDIVSWSAMIQ 40
             + G+ +H  V   G   +VFV T LV +Y+K+G +  AR+VFD + EK++VSW+A+I 
Sbjct: 117 YFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIIC 176

Query: 39  GYASNGLPKEAL 4
           GY  +G   EAL
Sbjct: 177 GYIESGCFGEAL 188



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
 Frame = -1

Query: 432 YSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYTL 253
           Y++CG +  A +VF+ +  K+ V + A+ISG         A  +F  ++ + ++PD  T 
Sbjct: 349 YAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTF 408

Query: 252 VRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGT-------SLVDMYAKSGNMEAARR 94
           V +L  CT  G V+ G   HRY + +    +VF  T        +VD+ A++G +  A+ 
Sbjct: 409 VGLLCGCTHAGLVDDG---HRYFSGMS---SVFSVTPTIEHYGCMVDLQARAGLLVEAQD 462

Query: 93  VFDGM-SEKDIVSWSAMIQG 37
           +   M  E + + W A++ G
Sbjct: 463 LIRSMPMEANSIVWGALLGG 482


>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 678

 Score =  192 bits (488), Expect = 2e-47
 Identities = 93/144 (64%), Positives = 112/144 (77%)
 Frame = -1

Query: 432 YSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYTL 253
           YS+CG L DA KVF+D+V KNVV WT +I G I   KF+EA+D+FRGLL   LRPD + +
Sbjct: 149 YSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVI 208

Query: 252 VRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMSE 73
           VRVL AC +LGD+ +G WI R + + G+ RNVFV TSLVDMY K G+ME AR VFDGM E
Sbjct: 209 VRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVE 268

Query: 72  KDIVSWSAMIQGYASNGLPKEALD 1
           KDIV WSAMIQGYASNGLP+EA++
Sbjct: 269 KDIVCWSAMIQGYASNGLPREAIE 292



 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/138 (40%), Positives = 85/138 (61%)
 Frame = -1

Query: 435 LYSRCGCLGDAHKVFEDIVDKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYT 256
           +Y++CG + +A  VF+ +V+K++VCW+A+I GY      +EAI++F  +  +N+RPD Y 
Sbjct: 249 MYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYA 308

Query: 255 LVRVLSACTQLGDVNTGVWIHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMS 76
           +V  LS+C  LG +  G W    +       N  +GTSL+D YAK G+ME A  V+  M 
Sbjct: 309 MVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMK 368

Query: 75  EKDIVSWSAMIQGYASNG 22
           EKD V ++A+I G A  G
Sbjct: 369 EKDRVVFNAVISGLAMYG 386



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/126 (34%), Positives = 68/126 (53%)
 Frame = -1

Query: 378 DKNVVCWTAIISGYIGIKKFKEAIDMFRGLLGMNLRPDSYTLVRVLSACTQLGDVNTGVW 199
           + N   +  +I G +   +F  A+ ++  +    + PDS+T   VL AC +L   + GV 
Sbjct: 66  NSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVM 125

Query: 198 IHRYVADIGMQRNVFVGTSLVDMYAKSGNMEAARRVFDGMSEKDIVSWSAMIQGYASNGL 19
           IH  V   G   +VFV T++V  Y+K G +  A +VFD M  K++VSW+ MI G    G 
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGK 185

Query: 18  PKEALD 1
            +EA+D
Sbjct: 186 FREAVD 191