BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040880
         (1199 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   647   0.0  
ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   634   e-179
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   634   e-179
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              634   e-179
gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]        627   e-177

>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
            gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
            MSH2, putative [Ricinus communis]
          Length = 936

 Score =  647 bits (1668), Expect = 0.0
 Identities = 317/399 (79%), Positives = 353/399 (88%)
 Frame = -2

Query: 1198 FGLMNRTCTAGMGRRLLHMWLKQPLLDVNKINCRLDLVQAFVDDPELRQNLRQHLKRISD 1019
            FGLMNRTCTAGMG+RLLHMWLKQPLLDVN+IN RLDLVQAFV+D  LRQ+LRQHLKRISD
Sbjct: 316  FGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAFVEDTALRQDLRQHLKRISD 375

Query: 1018 IERLMRSLEKKSVYLLHVVKLYQSSIRLPYIKSALQRYDGPFASLIKERYLDPLDSWTDD 839
            IERL+ +LEK+   L H+VKLYQSSIRLPYI+ AL +YDG F+SLIKERYLDPL+S TDD
Sbjct: 376  IERLVHNLEKRRAGLQHIVKLYQSSIRLPYIRGALDKYDGQFSSLIKERYLDPLESLTDD 435

Query: 838  GHLNRFLALVEVSVDLDQLENGEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTXXXXX 659
             HLN+F+ALVE SVDLDQL+NGEY+ISPSYD  LS+LK EQESLE QI+ LH+QT     
Sbjct: 436  DHLNKFIALVETSVDLDQLDNGEYLISPSYDPALSALKDEQESLECQIHNLHKQTAQDLD 495

Query: 658  XXXXXXXXXXKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLKILGDQ 479
                      KGTQFGHVFRITKKEEPK+RKKL T F+VLETRKDGVKFTN+KLK LGDQ
Sbjct: 496  LPQDKGLKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKDGVKFTNTKLKKLGDQ 555

Query: 478  YQKILDEYRNCQKELVSKVVETTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRP 299
            YQKI++EY+NCQKELV++VV+T A+F EVF+ +A LLS+LDVLLSFADLA SCPTPYTRP
Sbjct: 556  YQKIVEEYKNCQKELVNRVVQTAATFSEVFKSLAGLLSQLDVLLSFADLATSCPTPYTRP 615

Query: 298  DVTPSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWFQIITGPNMGGKSTFIRQV 119
            D+TPSD G+IILEGSRHPCVEAQDWVNFIPNDCKL+RGESWFQIITGPNMGGKSTFIRQV
Sbjct: 616  DITPSDVGNIILEGSRHPCVEAQDWVNFIPNDCKLIRGESWFQIITGPNMGGKSTFIRQV 675

Query: 118  GVNILMAQVGCFVPCDRAQISVRDCIFARVGAGDCQLHG 2
            GVNILMAQVG FVPCD+A ISVRDCIFARVGAGDCQL G
Sbjct: 676  GVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRG 714


>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  634 bits (1634), Expect = e-179
 Identities = 312/399 (78%), Positives = 349/399 (87%)
 Frame = -2

Query: 1198 FGLMNRTCTAGMGRRLLHMWLKQPLLDVNKINCRLDLVQAFVDDPELRQNLRQHLKRISD 1019
            FGLMNRTCTAGMG+RLLHMWLKQPL+DVN+INCR DLVQAFV+D  LRQ+LRQHLKRISD
Sbjct: 280  FGLMNRTCTAGMGKRLLHMWLKQPLVDVNEINCRQDLVQAFVEDTALRQDLRQHLKRISD 339

Query: 1018 IERLMRSLEKKSVYLLHVVKLYQSSIRLPYIKSALQRYDGPFASLIKERYLDPLDSWTDD 839
            IERL+R+LEK+   L HVVKLYQSSIRLPYIKSAL +YDG F+SLIKE+YLDPL+SWTDD
Sbjct: 340  IERLLRTLEKRRASLQHVVKLYQSSIRLPYIKSALGQYDGQFSSLIKEKYLDPLESWTDD 399

Query: 838  GHLNRFLALVEVSVDLDQLENGEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTXXXXX 659
             HLNRF+ LVE +VDL++LENGEYMIS  YD KL+SLK +QE+LE+QI+ LH+QT     
Sbjct: 400  DHLNRFIGLVEAAVDLNELENGEYMISSGYDAKLASLKNDQETLELQIHNLHKQTAIDLD 459

Query: 658  XXXXXXXXXXKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLKILGDQ 479
                      KGTQFGHVFRITKKEEPK+RKKL   F+VLETRKDGVKFTN+KLK LGDQ
Sbjct: 460  LPMDKSLKLEKGTQFGHVFRITKKEEPKIRKKLTAKFIVLETRKDGVKFTNTKLKKLGDQ 519

Query: 478  YQKILDEYRNCQKELVSKVVETTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRP 299
            YQKILDEY++CQ+ELV +VV+T A+F EVFE +A LLSELDVLLSFADLA S PT YTRP
Sbjct: 520  YQKILDEYKDCQRELVVRVVQTAATFSEVFENLARLLSELDVLLSFADLATSSPTAYTRP 579

Query: 298  DVTPSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWFQIITGPNMGGKSTFIRQV 119
            +++PS  GDIILEGSRHPCVEAQDWVNFIPNDCKLVR +SWFQIITGPNMGGKSTFIRQV
Sbjct: 580  EISPSHMGDIILEGSRHPCVEAQDWVNFIPNDCKLVREKSWFQIITGPNMGGKSTFIRQV 639

Query: 118  GVNILMAQVGCFVPCDRAQISVRDCIFARVGAGDCQLHG 2
            GVNILMAQVG FVPCD+A ISVRDCIFARVGAGDCQL G
Sbjct: 640  GVNILMAQVGSFVPCDKANISVRDCIFARVGAGDCQLRG 678


>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
            gi|296034481|gb|ADG85112.1| mismatch repair protein
            [Solanum lycopersicum]
          Length = 943

 Score =  634 bits (1634), Expect = e-179
 Identities = 307/399 (76%), Positives = 349/399 (87%)
 Frame = -2

Query: 1198 FGLMNRTCTAGMGRRLLHMWLKQPLLDVNKINCRLDLVQAFVDDPELRQNLRQHLKRISD 1019
            FGLMNRTCTAGMG+RLLHMWLKQPLLDV++INCRLDLVQAFV+D  LRQ+LRQHLKRISD
Sbjct: 320  FGLMNRTCTAGMGKRLLHMWLKQPLLDVDEINCRLDLVQAFVEDAALRQDLRQHLKRISD 379

Query: 1018 IERLMRSLEKKSVYLLHVVKLYQSSIRLPYIKSALQRYDGPFASLIKERYLDPLDSWTDD 839
            IERL  +LE+K   LLHVVKLYQS IR+PYIKS L+RYDG FA LI+ERY+D L+ W+DD
Sbjct: 380  IERLTHNLERKRASLLHVVKLYQSGIRIPYIKSVLERYDGQFAPLIRERYIDSLEKWSDD 439

Query: 838  GHLNRFLALVEVSVDLDQLENGEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTXXXXX 659
             HLN+F+ALVE +VDLDQLENGEYMIS +YD  LS+LK EQE+LE QI+ LH+QT     
Sbjct: 440  NHLNKFIALVETAVDLDQLENGEYMISSAYDPNLSALKDEQETLEQQIHNLHKQTANDLD 499

Query: 658  XXXXXXXXXXKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLKILGDQ 479
                      KGTQFGHVFRITKKEEPKVR++LN+H++VLETRKDGVKFTN+KLK LGD+
Sbjct: 500  LPIDKSLKLDKGTQFGHVFRITKKEEPKVRRQLNSHYIVLETRKDGVKFTNTKLKKLGDR 559

Query: 478  YQKILDEYRNCQKELVSKVVETTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRP 299
            YQKILDEY++CQKELV++VV+T ASF EVFEG+A  LSELDVLLSFADLA SCPT Y+RP
Sbjct: 560  YQKILDEYKSCQKELVARVVQTVASFSEVFEGLAGSLSELDVLLSFADLASSCPTAYSRP 619

Query: 298  DVTPSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWFQIITGPNMGGKSTFIRQV 119
            +++P D GDIILEG RHPCVEAQDWVNFIPNDC+LVRGESWFQIITGPNMGGKST+IRQV
Sbjct: 620  NISPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESWFQIITGPNMGGKSTYIRQV 679

Query: 118  GVNILMAQVGCFVPCDRAQISVRDCIFARVGAGDCQLHG 2
            GVN+LMAQVG FVPCD A IS+RDCIFARVGAGDCQL G
Sbjct: 680  GVNVLMAQVGSFVPCDNATISIRDCIFARVGAGDCQLKG 718


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  634 bits (1634), Expect = e-179
 Identities = 312/399 (78%), Positives = 349/399 (87%)
 Frame = -2

Query: 1198 FGLMNRTCTAGMGRRLLHMWLKQPLLDVNKINCRLDLVQAFVDDPELRQNLRQHLKRISD 1019
            FGLMNRTCTAGMG+RLLHMWLKQPL+DVN+INCR DLVQAFV+D  LRQ+LRQHLKRISD
Sbjct: 320  FGLMNRTCTAGMGKRLLHMWLKQPLVDVNEINCRQDLVQAFVEDTALRQDLRQHLKRISD 379

Query: 1018 IERLMRSLEKKSVYLLHVVKLYQSSIRLPYIKSALQRYDGPFASLIKERYLDPLDSWTDD 839
            IERL+R+LEK+   L HVVKLYQSSIRLPYIKSAL +YDG F+SLIKE+YLDPL+SWTDD
Sbjct: 380  IERLLRTLEKRRASLQHVVKLYQSSIRLPYIKSALGQYDGQFSSLIKEKYLDPLESWTDD 439

Query: 838  GHLNRFLALVEVSVDLDQLENGEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTXXXXX 659
             HLNRF+ LVE +VDL++LENGEYMIS  YD KL+SLK +QE+LE+QI+ LH+QT     
Sbjct: 440  DHLNRFIGLVEAAVDLNELENGEYMISSGYDAKLASLKNDQETLELQIHNLHKQTAIDLD 499

Query: 658  XXXXXXXXXXKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLKILGDQ 479
                      KGTQFGHVFRITKKEEPK+RKKL   F+VLETRKDGVKFTN+KLK LGDQ
Sbjct: 500  LPMDKSLKLEKGTQFGHVFRITKKEEPKIRKKLTAKFIVLETRKDGVKFTNTKLKKLGDQ 559

Query: 478  YQKILDEYRNCQKELVSKVVETTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRP 299
            YQKILDEY++CQ+ELV +VV+T A+F EVFE +A LLSELDVLLSFADLA S PT YTRP
Sbjct: 560  YQKILDEYKDCQRELVVRVVQTAATFSEVFENLARLLSELDVLLSFADLATSSPTAYTRP 619

Query: 298  DVTPSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWFQIITGPNMGGKSTFIRQV 119
            +++PS  GDIILEGSRHPCVEAQDWVNFIPNDCKLVR +SWFQIITGPNMGGKSTFIRQV
Sbjct: 620  EISPSHMGDIILEGSRHPCVEAQDWVNFIPNDCKLVREKSWFQIITGPNMGGKSTFIRQV 679

Query: 118  GVNILMAQVGCFVPCDRAQISVRDCIFARVGAGDCQLHG 2
            GVNILMAQVG FVPCD+A ISVRDCIFARVGAGDCQL G
Sbjct: 680  GVNILMAQVGSFVPCDKANISVRDCIFARVGAGDCQLRG 718


>gb|AAT67044.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 942

 Score =  627 bits (1618), Expect = e-177
 Identities = 304/399 (76%), Positives = 348/399 (87%)
 Frame = -2

Query: 1198 FGLMNRTCTAGMGRRLLHMWLKQPLLDVNKINCRLDLVQAFVDDPELRQNLRQHLKRISD 1019
            FGLMNRTCTAGMG+RLLHMWLKQPLLDV+KINCRLDLVQAFV+D  LRQ+LRQHLKRI+D
Sbjct: 320  FGLMNRTCTAGMGKRLLHMWLKQPLLDVDKINCRLDLVQAFVEDAALRQDLRQHLKRIAD 379

Query: 1018 IERLMRSLEKKSVYLLHVVKLYQSSIRLPYIKSALQRYDGPFASLIKERYLDPLDSWTDD 839
            IERL R+LE+K   L+HVVKLYQSSIRLPYIKS L RYDG FA+LI+E+Y+DPL++ +DD
Sbjct: 380  IERLTRNLERKRASLVHVVKLYQSSIRLPYIKSVLARYDGQFATLIREKYIDPLENLSDD 439

Query: 838  GHLNRFLALVEVSVDLDQLENGEYMISPSYDEKLSSLKIEQESLEMQINKLHQQTXXXXX 659
             HLN+F+ LVE S+DLDQLE+GEYMIS +YD  LS+LK EQE+LE  I+ LH+QT     
Sbjct: 440  NHLNKFIGLVETSIDLDQLESGEYMISSAYDPNLSALKDEQETLERHIHNLHKQTANDLD 499

Query: 658  XXXXXXXXXXKGTQFGHVFRITKKEEPKVRKKLNTHFVVLETRKDGVKFTNSKLKILGDQ 479
                      K T FGHVFRITKKEEPK+RK+LN+H+++LETRKDGVKFTN+KLK LGDQ
Sbjct: 500  LPVDKSLKLDKETTFGHVFRITKKEEPKIRKQLNSHYIILETRKDGVKFTNTKLKKLGDQ 559

Query: 478  YQKILDEYRNCQKELVSKVVETTASFGEVFEGIAVLLSELDVLLSFADLAVSCPTPYTRP 299
            YQKI++EY++CQKELV++VV+T ASF EVFEGIA  LSELDVLLS ADLA SCPTPYTRP
Sbjct: 560  YQKIVEEYKSCQKELVARVVQTAASFSEVFEGIAGSLSELDVLLSLADLAASCPTPYTRP 619

Query: 298  DVTPSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGESWFQIITGPNMGGKSTFIRQV 119
            ++TP D GDIILEG RHPCVEAQDWVNFIPNDC+LVRGESWFQIITGPNMGGKST+IRQV
Sbjct: 620  NITPPDTGDIILEGCRHPCVEAQDWVNFIPNDCRLVRGESWFQIITGPNMGGKSTYIRQV 679

Query: 118  GVNILMAQVGCFVPCDRAQISVRDCIFARVGAGDCQLHG 2
            GVNILMAQVG FVPC+ A IS+RDCIFARVGAGDCQL G
Sbjct: 680  GVNILMAQVGSFVPCNNASISIRDCIFARVGAGDCQLRG 718