BLASTX nr result

ID: Cnidium21_contig00040845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040845
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273571.1| PREDICTED: crooked neck-like protein 1 [Viti...   202   2e-50
ref|XP_004139458.1| PREDICTED: crooked neck-like protein 1-like ...   202   3e-50
ref|XP_002299492.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|XP_002303629.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|XP_003611014.1| Pre-mRNA-splicing factor CLF1 [Medicago trun...   201   4e-50

>ref|XP_002273571.1| PREDICTED: crooked neck-like protein 1 [Vitis vinifera]
           gi|147864786|emb|CAN81550.1| hypothetical protein
           VITISV_028250 [Vitis vinifera]
          Length = 703

 Score =  202 bits (514), Expect = 2e-50
 Identities = 98/134 (73%), Positives = 115/134 (85%)
 Frame = +2

Query: 2   KNLAPVQITAEQILREARHHQQSTVIKPPKQIITDLTELSDYRLRKRKEFEDLIRRQSNN 181
           K  AP+QITAEQILREAR  Q++  I+PPKQ ITD TEL+DYRLRKRKEFEDLIRR   N
Sbjct: 31  KTPAPIQITAEQILREARERQEAE-IRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWN 89

Query: 182 VLVFIRYAKWEASQNDFTRARSVWERAVNVNYRDHSVWFKYAEFEMRNKFISNARNVWDR 361
           + V+I+YA+WE SQ DF RARSVWERA+ V+YR+H++W KYAE EM+NKFI++ARNVWDR
Sbjct: 90  ISVWIKYAQWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDR 149

Query: 362 AVLLLPRVDQLWYK 403
           AV LLPRVDQLWYK
Sbjct: 150 AVTLLPRVDQLWYK 163


>ref|XP_004139458.1| PREDICTED: crooked neck-like protein 1-like [Cucumis sativus]
          Length = 703

 Score =  202 bits (513), Expect = 3e-50
 Identities = 98/134 (73%), Positives = 115/134 (85%)
 Frame = +2

Query: 2   KNLAPVQITAEQILREARHHQQSTVIKPPKQIITDLTELSDYRLRKRKEFEDLIRRQSNN 181
           K  AP+QITAEQILREAR  Q++  I+PPKQ ITD TEL+DYRLRKRKEFEDLIRR   N
Sbjct: 32  KTPAPIQITAEQILREARERQEAE-IRPPKQKITDPTELADYRLRKRKEFEDLIRRVRWN 90

Query: 182 VLVFIRYAKWEASQNDFTRARSVWERAVNVNYRDHSVWFKYAEFEMRNKFISNARNVWDR 361
           + V+I+YA+WE SQ DF RARSVWERA+ V+YR+H++W KYAE EM+NKFI++ARNVWDR
Sbjct: 91  ISVWIKYAQWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDR 150

Query: 362 AVLLLPRVDQLWYK 403
           AV LLPRVDQLWYK
Sbjct: 151 AVTLLPRVDQLWYK 164


>ref|XP_002299492.1| predicted protein [Populus trichocarpa] gi|222846750|gb|EEE84297.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score =  202 bits (513), Expect = 3e-50
 Identities = 97/134 (72%), Positives = 115/134 (85%)
 Frame = +2

Query: 2   KNLAPVQITAEQILREARHHQQSTVIKPPKQIITDLTELSDYRLRKRKEFEDLIRRQSNN 181
           K  AP+QITAEQILREAR  Q++  I+PPKQ ITD TEL+DYRLRKRKEFEDLIRR   N
Sbjct: 32  KTPAPIQITAEQILREARERQEAE-IRPPKQKITDSTELADYRLRKRKEFEDLIRRVRWN 90

Query: 182 VLVFIRYAKWEASQNDFTRARSVWERAVNVNYRDHSVWFKYAEFEMRNKFISNARNVWDR 361
           + V+I+YA+WE SQ DF RARSVWERA+ V+YR+H++W KYAE EM+NKFI++ARNVWDR
Sbjct: 91  ISVWIKYAQWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDR 150

Query: 362 AVLLLPRVDQLWYK 403
           AV LLPR+DQLWYK
Sbjct: 151 AVTLLPRIDQLWYK 164


>ref|XP_002303629.1| predicted protein [Populus trichocarpa] gi|222841061|gb|EEE78608.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score =  202 bits (513), Expect = 3e-50
 Identities = 98/134 (73%), Positives = 114/134 (85%)
 Frame = +2

Query: 2   KNLAPVQITAEQILREARHHQQSTVIKPPKQIITDLTELSDYRLRKRKEFEDLIRRQSNN 181
           K  AP+QITAEQILREAR  Q++  I+PPKQ ITD TEL DYRLRKRKEFEDLIRR   N
Sbjct: 32  KTPAPIQITAEQILREARERQEAD-IRPPKQKITDSTELGDYRLRKRKEFEDLIRRVRWN 90

Query: 182 VLVFIRYAKWEASQNDFTRARSVWERAVNVNYRDHSVWFKYAEFEMRNKFISNARNVWDR 361
           + V+I+YA+WE SQ DF RARSVWERA+ V+YR+H++W KYAE EM+NKFI++ARNVWDR
Sbjct: 91  ISVWIKYAQWEESQKDFNRARSVWERALEVDYRNHTLWLKYAEVEMKNKFINHARNVWDR 150

Query: 362 AVLLLPRVDQLWYK 403
           AV LLPRVDQLWYK
Sbjct: 151 AVTLLPRVDQLWYK 164


>ref|XP_003611014.1| Pre-mRNA-splicing factor CLF1 [Medicago truncatula]
           gi|355512349|gb|AES93972.1| Pre-mRNA-splicing factor
           CLF1 [Medicago truncatula]
          Length = 693

 Score =  201 bits (512), Expect = 4e-50
 Identities = 98/134 (73%), Positives = 115/134 (85%)
 Frame = +2

Query: 2   KNLAPVQITAEQILREARHHQQSTVIKPPKQIITDLTELSDYRLRKRKEFEDLIRRQSNN 181
           K  AP+QITAEQILREAR  Q++  I+PPKQ ITD TEL +YRLRKRKEFEDLIRR   N
Sbjct: 32  KTPAPIQITAEQILREARERQEAE-IRPPKQKITDSTELGEYRLRKRKEFEDLIRRVRWN 90

Query: 182 VLVFIRYAKWEASQNDFTRARSVWERAVNVNYRDHSVWFKYAEFEMRNKFISNARNVWDR 361
           V V+I+YA+WE SQ DFTRARSVWERA+ V+Y++H++W KYAE EM+NKFI++ARNVWDR
Sbjct: 91  VSVWIKYAQWEESQKDFTRARSVWERALEVDYKNHTLWLKYAEVEMKNKFINHARNVWDR 150

Query: 362 AVLLLPRVDQLWYK 403
           AV LLPRVDQLWYK
Sbjct: 151 AVTLLPRVDQLWYK 164


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