BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040844
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             214   6e-54
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   214   6e-54
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         213   2e-53
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   213   2e-53
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   212   2e-53

>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  214 bits (545), Expect = 6e-54
 Identities = 99/132 (75%), Positives = 116/132 (87%)
 Frame = +1

Query: 1    RKSTTGFIFFLGDTAFTWSSKKQPIVTLSTCEAEYVSAASCVCHAIWLRRLLRMIHVPQG 180
            RKST+GF+F++GDTAFTW SKKQPIVTLSTCEAEYV+A SCVCHAIWLR LL+ + +PQ 
Sbjct: 1144 RKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1203

Query: 181  KATTICIDNKSAIALAKNPTFHDRSKHIDTRYHFIRECVERKDVELTYVKTNDQIADIFT 360
            + T I +DNKSAIALAKNP FHDRSKHIDTRYH+IRECV +KDV+L YVKT+DQ+ADIFT
Sbjct: 1204 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFT 1263

Query: 361  KALKFEVFTRLR 396
            K LK E F ++R
Sbjct: 1264 KPLKREDFIKMR 1275


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  214 bits (545), Expect = 6e-54
 Identities = 99/132 (75%), Positives = 116/132 (87%)
 Frame = +1

Query: 1    RKSTTGFIFFLGDTAFTWSSKKQPIVTLSTCEAEYVSAASCVCHAIWLRRLLRMIHVPQG 180
            RKST+GF+F++GDTAFTW SKKQPIVTLSTCEAEYV+A SCVCHAIWLR LL+ + +PQ 
Sbjct: 1173 RKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1232

Query: 181  KATTICIDNKSAIALAKNPTFHDRSKHIDTRYHFIRECVERKDVELTYVKTNDQIADIFT 360
            + T I +DNKSAIALAKNP FHDRSKHIDTRYH+IRECV +KDV+L YVKT+DQ+ADIFT
Sbjct: 1233 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFT 1292

Query: 361  KALKFEVFTRLR 396
            K LK E F ++R
Sbjct: 1293 KPLKREDFIKMR 1304


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  213 bits (541), Expect = 2e-53
 Identities = 98/132 (74%), Positives = 115/132 (87%)
 Frame = +1

Query: 1    RKSTTGFIFFLGDTAFTWSSKKQPIVTLSTCEAEYVSAASCVCHAIWLRRLLRMIHVPQG 180
            RKST+GF+F++GDTAFTW SKKQPIVTLSTCEAEYV+A SCVCHAIWLR LL+ + +PQ 
Sbjct: 1205 RKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1264

Query: 181  KATTICIDNKSAIALAKNPTFHDRSKHIDTRYHFIRECVERKDVELTYVKTNDQIADIFT 360
            + T I +DNKSAIALAKNP FHDRSKHIDTRYH+IRECV +KDV+L YVKT+DQ+AD FT
Sbjct: 1265 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFT 1324

Query: 361  KALKFEVFTRLR 396
            K LK E F ++R
Sbjct: 1325 KPLKRENFIKMR 1336


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  213 bits (541), Expect = 2e-53
 Identities = 98/132 (74%), Positives = 115/132 (87%)
 Frame = +1

Query: 1    RKSTTGFIFFLGDTAFTWSSKKQPIVTLSTCEAEYVSAASCVCHAIWLRRLLRMIHVPQG 180
            RKST+GF+F++GDTAFTW SKKQPIVTLSTCEAEYV+A SCVCHAIWLR LL+ + +PQ 
Sbjct: 1205 RKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1264

Query: 181  KATTICIDNKSAIALAKNPTFHDRSKHIDTRYHFIRECVERKDVELTYVKTNDQIADIFT 360
            + T I +DNKSAIALAKNP FHDRSKHIDTRYH+IRECV +KDV+L YVKT+DQ+AD FT
Sbjct: 1265 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFT 1324

Query: 361  KALKFEVFTRLR 396
            K LK E F ++R
Sbjct: 1325 KPLKRENFIKMR 1336


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  212 bits (540), Expect = 2e-53
 Identities = 98/132 (74%), Positives = 115/132 (87%)
 Frame = +1

Query: 1    RKSTTGFIFFLGDTAFTWSSKKQPIVTLSTCEAEYVSAASCVCHAIWLRRLLRMIHVPQG 180
            RKST+GF+F++GDTAFTW SKKQPIV LSTCEAEYV+A SCVCHAIWLR LL+ + +PQ 
Sbjct: 1205 RKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQE 1264

Query: 181  KATTICIDNKSAIALAKNPTFHDRSKHIDTRYHFIRECVERKDVELTYVKTNDQIADIFT 360
            + T I +DNKSAIALAKNP FHDRSKHIDTRYH+IRECV +KDV+L YVKT+DQ+ADIFT
Sbjct: 1265 EPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFT 1324

Query: 361  KALKFEVFTRLR 396
            K LK E F ++R
Sbjct: 1325 KPLKREDFIKMR 1336