BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040802
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   157   6e-37
ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   157   1e-36
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   143   1e-32
ref|NP_188314.1| pentatricopeptide repeat-containing protein [Ar...   139   3e-31

>ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|222851220|gb|EEE88767.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  164 bits (416), Expect = 5e-39
 Identities = 77/134 (57%), Positives = 98/134 (73%)
 Frame = -1

Query: 410 LPNVACDAILLCLSSSSLPREAAMFLKKAKSRGYCPDSSTFSSTITCLIKGLDLKETCDI 231
           L  +ACD +L CLS   +PREA   L+K   RGY PDSSTF+ T+TCL+KGLD+ ETC I
Sbjct: 192 LGRLACDTLLCCLSEKCMPREAGALLRKLGERGYLPDSSTFNITMTCLLKGLDVNETCGI 251

Query: 230 LDSFVNRNIKLGFNAYLTLLEALYKGGKEEVGNRYLNQMLEHGFVANVYSYNMLIDCFCK 51
           LD F+ R  KLGF+ YL L+E LYK G+   G+RYLNQM++   V++V+SYNMLIDCFCK
Sbjct: 252 LDKFIARGAKLGFSFYLALIETLYKAGRGMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCK 311

Query: 50  TNMMDKASQYFQDM 9
            N+M+KA   F+ M
Sbjct: 312 ANVMNKAVMVFKVM 325


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  157 bits (398), Expect = 6e-37
 Identities = 69/134 (51%), Positives = 97/134 (72%)
 Frame = -1

Query: 410 LPNVACDAILLCLSSSSLPREAAMFLKKAKSRGYCPDSSTFSSTITCLIKGLDLKETCDI 231
           +  + CD IL CLS++S+  EA MFL K    GY P SSTF+ T+ C++K LDLK TC +
Sbjct: 367 ITQLVCDNILYCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCTV 426

Query: 230 LDSFVNRNIKLGFNAYLTLLEALYKGGKEEVGNRYLNQMLEHGFVANVYSYNMLIDCFCK 51
            D+ V   +K GF+ YLTL+EALYK GK E+GNRY+++++  G ++N+YSYNM+IDC CK
Sbjct: 427 FDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCK 486

Query: 50  TNMMDKASQYFQDM 9
              MD+AS+ F+D+
Sbjct: 487 GKSMDRASEMFRDL 500


>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/134 (54%), Positives = 95/134 (70%)
 Frame = -1

Query: 410 LPNVACDAILLCLSSSSLPREAAMFLKKAKSRGYCPDSSTFSSTITCLIKGLDLKETCDI 231
           L  +ACD +L CLSS ++ REA   LKK    G+ PDS+TF+  + CLIKG DL E C+I
Sbjct: 355 LQRLACDTLLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNI 414

Query: 230 LDSFVNRNIKLGFNAYLTLLEALYKGGKEEVGNRYLNQMLEHGFVANVYSYNMLIDCFCK 51
           LD FV + +K GF+ YL L++ALY  GK   GN Y NQM++ G + NV SYNM+IDCFCK
Sbjct: 415 LDRFVEQGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCK 474

Query: 50  TNMMDKASQYFQDM 9
           T+MMDKA+  F++M
Sbjct: 475 TSMMDKATNTFKEM 488


>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  143 bits (361), Expect = 1e-32
 Identities = 65/134 (48%), Positives = 93/134 (69%)
 Frame = -1

Query: 410 LPNVACDAILLCLSSSSLPREAAMFLKKAKSRGYCPDSSTFSSTITCLIKGLDLKETCDI 231
           +  + CD IL CLS++S+  EA MF          P SSTF+ T+ C++K LDLK TC +
Sbjct: 367 ITQLVCDNILYCLSNNSMASEAVMFX---------PSSSTFNITLACVLKKLDLKVTCTV 417

Query: 230 LDSFVNRNIKLGFNAYLTLLEALYKGGKEEVGNRYLNQMLEHGFVANVYSYNMLIDCFCK 51
            D+ V   +K GF+ YLTL+EALYK GK E+GNRY+++++  G ++N+YSYNM+IDC CK
Sbjct: 418 FDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCK 477

Query: 50  TNMMDKASQYFQDM 9
              MD+AS+ F+D+
Sbjct: 478 GKSMDRASEMFRDL 491


>ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g16890, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
           gi|7670019|dbj|BAA94973.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332642359|gb|AEE75880.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 659

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/136 (47%), Positives = 91/136 (66%)
 Frame = -1

Query: 416 AKLPNVACDAILLCLSSSSLPREAAMFLKKAKSRGYCPDSSTFSSTITCLIKGLDLKETC 237
           + L  V  DA+L CLS++S+ +E   FL+K   RGY PDSSTF++ ++CL+KG DL ETC
Sbjct: 316 SNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETC 375

Query: 236 DILDSFVNRNIKLGFNAYLTLLEALYKGGKEEVGNRYLNQMLEHGFVANVYSYNMLIDCF 57
            I D FV+R +K GFN YL L++AL    +   G+RYL QM   G +++VYSYN +IDC 
Sbjct: 376 RIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCL 435

Query: 56  CKTNMMDKASQYFQDM 9
           CK   ++ A+ +  +M
Sbjct: 436 CKARRIENAAMFLTEM 451



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 30/109 (27%), Positives = 50/109 (45%)
 Frame = -1

Query: 335 LKKAKSRGYCPDSSTFSSTITCLIKGLDLKETCDILDSFVNRNIKLGFNAYLTLLEALYK 156
           L+K    G+ PD  TFS  I CL +  ++K+  D     +   I+     Y  L+ +   
Sbjct: 483 LEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCS 542

Query: 155 GGKEEVGNRYLNQMLEHGFVANVYSYNMLIDCFCKTNMMDKASQYFQDM 9
            G  +   +   +M E+G   ++Y+YN  I  FCK   + KA +  + M
Sbjct: 543 TGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTM 591