BLASTX nr result

ID: Cnidium21_contig00040783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040783
         (848 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522328.1| DNA binding protein, putative [Ricinus commu...   104   1e-41
ref|XP_002264629.2| PREDICTED: uncharacterized protein LOC100243...   104   1e-37
emb|CBI23283.3| unnamed protein product [Vitis vinifera]              104   1e-37
emb|CAN83122.1| hypothetical protein VITISV_044371 [Vitis vinifera]   104   1e-37
ref|XP_002330275.1| predicted protein [Populus trichocarpa] gi|2...   105   9e-36

>ref|XP_002522328.1| DNA binding protein, putative [Ricinus communis]
           gi|223538406|gb|EEF40012.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 370

 Score =  104 bits (260), Expect(2) = 1e-41
 Identities = 59/130 (45%), Positives = 79/130 (60%)
 Frame = -3

Query: 837 DLNSSFVPVNISEFLIELSMITDVRERTMKIDDYVLHLQDELNKVHAFKRELPLCMLLLN 658
           DL+  +VP  ISE+L E+S + D   +  K+DDYV  L+DE+ K+ AFKRELPLCMLLLN
Sbjct: 6   DLSLVYVPKTISEYLKEVSKVKDSSLKLSKLDDYVQRLEDEMRKIDAFKRELPLCMLLLN 65

Query: 657 DAIERLXXXXXXXXXXETRPLIEEFVTLKGGKSDDNGGVIKSIDYSEKKNWMSSVQLWST 478
           DAI RL               +EE V++KG    +    +++ D  +KKNWMSSVQLW+ 
Sbjct: 66  DAIVRLKEEAMQCKE------LEEVVSVKGNSCRNEERELEN-DMIDKKNWMSSVQLWNN 118

Query: 477 NVQFHNFGHD 448
           N   +N   D
Sbjct: 119 NNHTNNNNFD 128



 Score = 92.0 bits (227), Expect(2) = 1e-41
 Identities = 57/128 (44%), Positives = 72/128 (56%), Gaps = 7/128 (5%)
 Frame = -1

Query: 365 TEEDGSRSS-GGCNQICDKLRSSGGAFVPFKRQSGPLLKEKLDNLVKEKNKNLAINNLSV 189
           +EED  RS+     Q+C+  RS GG F+PFK  SG   KE       EK     +  LS+
Sbjct: 142 SEEDDDRSTCENPTQLCNH-RSKGGGFMPFKSTSGFEKKE-------EKEVVSQVTGLSL 193

Query: 188 CVPMVEIGSINKNSKGN------IRGTSSSDSALPERKRRRCWSPDLHRRFVNALEQLGG 27
             P+ E+GS N  SK N      I+         P +K+RRCWSP+LHRRF++AL QLGG
Sbjct: 194 MTPVSELGSRNLMSKTNGTDQFKIQNKPQQQQQQPYKKQRRCWSPELHRRFIDALHQLGG 253

Query: 26  PHVATPKQ 3
             VATPKQ
Sbjct: 254 SQVATPKQ 261


>ref|XP_002264629.2| PREDICTED: uncharacterized protein LOC100243049 [Vitis vinifera]
          Length = 386

 Score =  104 bits (259), Expect(2) = 1e-37
 Identities = 58/121 (47%), Positives = 72/121 (59%)
 Frame = -3

Query: 837 DLNSSFVPVNISEFLIELSMITDVRERTMKIDDYVLHLQDELNKVHAFKRELPLCMLLLN 658
           DLN       +S FL E+SM+ D  E+  K+DDYV  L+DE+ K+  FKRELPLCMLLLN
Sbjct: 11  DLNPGCELKTVSSFLREVSMMRDSSEKLSKLDDYVKGLEDEMRKIDGFKRELPLCMLLLN 70

Query: 657 DAIERLXXXXXXXXXXETRPLIEEFVTLKGGKSDDNGGVIKSIDYSEKKNWMSSVQLWST 478
           DAI RL          E   + EEF+ LKG    D G  +   D S+K++WMS  QLWS 
Sbjct: 71  DAILRLREEAMQCTESEGGHVTEEFIPLKGRSEGDEGAEMGK-DSSDKRSWMSCAQLWSC 129

Query: 477 N 475
           N
Sbjct: 130 N 130



 Score = 79.0 bits (193), Expect(2) = 1e-37
 Identities = 57/140 (40%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
 Frame = -1

Query: 362 EEDGSRSSGGCNQICDKLRSSGGAFVPFKRQSGPLLKEKLDNLVKEKNKNLAINNLSVCV 183
           EED +  S    + C    +  GAFVPFK  SG     K D  V      + +  LS+  
Sbjct: 149 EEDNNSGSENPIRPCS-YGNRAGAFVPFKVSSG--FPAKGDKEV------VPVAGLSLMT 199

Query: 182 PMVEIGSINKNSKGNIRGTSSSDSAL-----------------PE---RKRRRCWSPDLH 63
           PMVE+   N NSK    G + S S                   P+   RK+RRCWSP+LH
Sbjct: 200 PMVEVDPNNSNSKCGNSGETGSGSVSTLLTDSMRLQCKSQQQPPQQGIRKQRRCWSPELH 259

Query: 62  RRFVNALEQLGGPHVATPKQ 3
           RRFVNAL+QLGG   ATPKQ
Sbjct: 260 RRFVNALQQLGGSQAATPKQ 279


>emb|CBI23283.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  104 bits (259), Expect(2) = 1e-37
 Identities = 58/121 (47%), Positives = 72/121 (59%)
 Frame = -3

Query: 837 DLNSSFVPVNISEFLIELSMITDVRERTMKIDDYVLHLQDELNKVHAFKRELPLCMLLLN 658
           DLN       +S FL E+SM+ D  E+  K+DDYV  L+DE+ K+  FKRELPLCMLLLN
Sbjct: 7   DLNPGCELKTVSSFLREVSMMRDSSEKLSKLDDYVKGLEDEMRKIDGFKRELPLCMLLLN 66

Query: 657 DAIERLXXXXXXXXXXETRPLIEEFVTLKGGKSDDNGGVIKSIDYSEKKNWMSSVQLWST 478
           DAI RL          E   + EEF+ LKG    D G  +   D S+K++WMS  QLWS 
Sbjct: 67  DAILRLREEAMQCTESEGGHVTEEFIPLKGRSEGDEGAEMGK-DSSDKRSWMSCAQLWSC 125

Query: 477 N 475
           N
Sbjct: 126 N 126



 Score = 79.0 bits (193), Expect(2) = 1e-37
 Identities = 57/140 (40%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
 Frame = -1

Query: 362 EEDGSRSSGGCNQICDKLRSSGGAFVPFKRQSGPLLKEKLDNLVKEKNKNLAINNLSVCV 183
           EED +  S    + C    +  GAFVPFK  SG     K D  V      + +  LS+  
Sbjct: 145 EEDNNSGSENPIRPCS-YGNRAGAFVPFKVSSG--FPAKGDKEV------VPVAGLSLMT 195

Query: 182 PMVEIGSINKNSKGNIRGTSSSDSAL-----------------PE---RKRRRCWSPDLH 63
           PMVE+   N NSK    G + S S                   P+   RK+RRCWSP+LH
Sbjct: 196 PMVEVDPNNSNSKCGNSGETGSGSVSTLLTDSMRLQCKSQQQPPQQGIRKQRRCWSPELH 255

Query: 62  RRFVNALEQLGGPHVATPKQ 3
           RRFVNAL+QLGG   ATPKQ
Sbjct: 256 RRFVNALQQLGGSQAATPKQ 275


>emb|CAN83122.1| hypothetical protein VITISV_044371 [Vitis vinifera]
          Length = 382

 Score =  104 bits (259), Expect(2) = 1e-37
 Identities = 58/121 (47%), Positives = 72/121 (59%)
 Frame = -3

Query: 837 DLNSSFVPVNISEFLIELSMITDVRERTMKIDDYVLHLQDELNKVHAFKRELPLCMLLLN 658
           DLN       +S FL E+SM+ D  E+  K+DDYV  L+DE+ K+  FKRELPLCMLLLN
Sbjct: 7   DLNPGCELKTVSSFLREVSMMRDSSEKLSKLDDYVKGLEDEMRKIDGFKRELPLCMLLLN 66

Query: 657 DAIERLXXXXXXXXXXETRPLIEEFVTLKGGKSDDNGGVIKSIDYSEKKNWMSSVQLWST 478
           DAI RL          E   + EEF+ LKG    D G  +   D S+K++WMS  QLWS 
Sbjct: 67  DAILRLREEAMQCTESEGGHVTEEFIPLKGRSEGDEGAEMGK-DSSDKRSWMSXAQLWSC 125

Query: 477 N 475
           N
Sbjct: 126 N 126



 Score = 79.0 bits (193), Expect(2) = 1e-37
 Identities = 57/140 (40%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
 Frame = -1

Query: 362 EEDGSRSSGGCNQICDKLRSSGGAFVPFKRQSGPLLKEKLDNLVKEKNKNLAINNLSVCV 183
           EED +  S    + C    +  GAFVPFK  SG     K D  V      + +  LS+  
Sbjct: 145 EEDNNSGSENPIRPCS-YGNRAGAFVPFKVSSG--FPAKGDKEV------VPVAGLSLMT 195

Query: 182 PMVEIGSINKNSKGNIRGTSSSDSAL-----------------PE---RKRRRCWSPDLH 63
           PMVE+   N NSK    G + S S                   P+   RK+RRCWSP+LH
Sbjct: 196 PMVEVDPNNSNSKCGNSGETGSGSVSTLLTDSMRLQCKSQQQPPQQGIRKQRRCWSPELH 255

Query: 62  RRFVNALEQLGGPHVATPKQ 3
           RRFVNAL+QLGG   ATPKQ
Sbjct: 256 RRFVNALQQLGGSQAATPKQ 275


>ref|XP_002330275.1| predicted protein [Populus trichocarpa] gi|222871310|gb|EEF08441.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  105 bits (263), Expect(2) = 9e-36
 Identities = 62/139 (44%), Positives = 88/139 (63%), Gaps = 7/139 (5%)
 Frame = -3

Query: 825 SFVPVNISEFLIELSMITDVRERTMKIDDYVLHLQDELNKVHAFKRELPLCMLLLNDAIE 646
           +F+P  I++FL E+SMI D   + +K+D ++  L++E  K+ AFKRELPLCMLLLNDAI+
Sbjct: 30  TFLPETITDFLKEVSMIGDAAVKGLKVDSFLNDLEEEKRKIDAFKRELPLCMLLLNDAIQ 89

Query: 645 RLXXXXXXXXXXET-RPLIEEFVTLKGGKSDDNG------GVIKSIDYSEKKNWMSSVQL 487
            +             +P++EEF+ LK  K DD+G      G+IK  D  +KKNWMSSVQL
Sbjct: 90  VVREELMQCGTSNNQQPVLEEFIPLK-KKIDDHGDDRESDGLIKEKDSKDKKNWMSSVQL 148

Query: 486 WSTNVQFHNFGHDFLSNLK 430
           W T+   H+   D+L + K
Sbjct: 149 WITD--DHHPSTDYLFDAK 165



 Score = 71.2 bits (173), Expect(2) = 9e-36
 Identities = 47/126 (37%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
 Frame = -1

Query: 326 QICDKLRSSGGAFVPFKRQSGPLLKEKLDNLVKEKNKNLAINNLSVCVPMVE-------- 171
           Q C K R++   F+PFK   G   KE   N      + L +  LS+  P ++        
Sbjct: 188 QAC-KGRTAARTFMPFKAYPGSSRKEDDSN-----REELPVPALSLLTPGIKSIKEESNS 241

Query: 170 ----------IGSINKNSKGNIRGTSSSDSALPERKRRRCWSPDLHRRFVNALEQLGGPH 21
                     + +   NS+ N+R    S      RK RRCWSP+LHR+FVNAL+QLGG  
Sbjct: 242 TGSRSSCSRSVSTTAPNSESNLRNGPQSQQQ-SSRKHRRCWSPELHRQFVNALQQLGGAQ 300

Query: 20  VATPKQ 3
           VATPKQ
Sbjct: 301 VATPKQ 306


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