BLASTX nr result
ID: Cnidium21_contig00040779
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00040779
(670 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi... 203 2e-50
ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat... 196 3e-48
ref|XP_003597735.1| Pentatricopeptide repeat-containing protein ... 193 2e-47
ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containi... 186 5e-45
gb|ABR17838.1| unknown [Picea sitchensis] 181 1e-43
>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 203 bits (517), Expect = 2e-50
Identities = 115/243 (47%), Positives = 149/243 (61%), Gaps = 21/243 (8%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
C + +A +FD+I + LWN ++ Y+ NG A +SL +MV GL P T
Sbjct: 224 CGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTA 283
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC*YCC-LAEREGA--- 321
+ A A + + GR++H + R E+ V AL+DMY KCGS L ER G
Sbjct: 284 ISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRV 343
Query: 320 -SW----------------I*LETRMIQVTRPNHITFVGVLSACNHGGLLDEGRNVFESM 192
SW + L M +V +P+HITFVGVLSAC+HGGLL+EG FE+M
Sbjct: 344 VSWNAMITGYAMHGHATEALDLFEEMNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETM 403
Query: 191 KKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIHRNMEM 12
+DY+I+PTV HYTCM+DLLGH GRLDEAYNLI M++LPDSGVWGALLNS KIH N+E+
Sbjct: 404 IRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVEL 463
Query: 11 GEL 3
GE+
Sbjct: 464 GEI 466
Score = 175 bits (443), Expect = 8e-42
Identities = 102/237 (43%), Positives = 135/237 (56%), Gaps = 23/237 (9%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
CD L +A LFDRIPK NIFLWNVLIRGYAWNGPY+AA+ LYYQM ++GLVPDNFT+PFV
Sbjct: 123 CDSLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFV 182
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC-----*YCCLAEREG 324
LKACAALS I+ GR+IHE+ ++G E D FVGAALIDMY KCG + + R+
Sbjct: 183 LKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDA 242
Query: 323 ASW----------------I*LETRMIQV-TRPNHITFVGVLSACNHGGLLDEGRNVFE- 198
W + L + M+ RP T V +SA L +GR +
Sbjct: 243 VLWNSMLAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGL 302
Query: 197 SMKKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIH 27
S ++++ V T ++D+ CG + A NL + + W A++ +H
Sbjct: 303 SWRQEFESHDKV--KTALVDMYAKCGSVRVARNLFERLGVKRVVS-WNAMITGYAMH 356
>ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 196 bits (499), Expect = 3e-48
Identities = 107/243 (44%), Positives = 145/243 (59%), Gaps = 21/243 (8%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
C + +A H+FD+I + LWN ++ YA NG ++SL +M G+ P T V
Sbjct: 207 CGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTV 266
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC*YCC-----LAEREG 324
+ + A ++ + GR+IH R G + + V ALIDMY KCGS C L E+
Sbjct: 267 ISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRV 326
Query: 323 ASW----------------I*LETRMIQVTRPNHITFVGVLSACNHGGLLDEGRNVFESM 192
SW + L RM++ +P+HITFVG L+AC+ G LLDEGR ++ M
Sbjct: 327 VSWNAIITGYAMHGLAVEALDLFERMMKEAQPDHITFVGALAACSRGRLLDEGRALYNLM 386
Query: 191 KKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIHRNMEM 12
+D RI PTV HYTCM+DLLGHCG+LDEAY+LI M ++PDSGVWGALLNS K H N+E+
Sbjct: 387 VRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVEL 446
Query: 11 GEL 3
E+
Sbjct: 447 AEV 449
Score = 171 bits (432), Expect = 2e-40
Identities = 100/237 (42%), Positives = 129/237 (54%), Gaps = 23/237 (9%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
C+ L+NAHHLFD+IPKGN+FLWNVLIR YAWNGP++ AISLY+QM+E+GL PDNFT PFV
Sbjct: 106 CNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFV 165
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC-----*YCCLAEREG 324
LKAC+ALS I GR IHE RSG E D FVGAAL+DMY KCG + + +R+
Sbjct: 166 LKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDA 225
Query: 323 ASWI*LETRMIQ-----------------VTRPNHITFVGVLSACNHGGLLDEGRNVFE- 198
W + Q RP T V V+S+ L GR +
Sbjct: 226 VLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGF 285
Query: 197 SMKKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIH 27
+ ++ V T +ID+ CG + A L +R W A++ +H
Sbjct: 286 GWRHGFQYNDKV--KTALIDMYAKCGSVKVACVLFERLREKRVVS-WNAIITGYAMH 339
>ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 193 bits (491), Expect = 2e-47
Identities = 110/243 (45%), Positives = 144/243 (59%), Gaps = 21/243 (8%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
C + +A +FD+I + LWN ++ YA NG +ISL +M G+ P T V
Sbjct: 196 CGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTV 255
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC*YCC-----LAEREG 324
+ + A ++ + GR+IH R G +++ V ALIDMY KCGS L E+
Sbjct: 256 ISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRV 315
Query: 323 ASW----------------I*LETRMIQVTRPNHITFVGVLSACNHGGLLDEGRNVFESM 192
SW + L +M + RP+HITFVGVL+AC+ G LLDEGR ++ M
Sbjct: 316 VSWNAIITGYAMHGLAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLM 375
Query: 191 KKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIHRNMEM 12
+DY I PTV HYTCMIDLLGHCG+LDEAY+LI M + PDSGVWGALLNS KIH N+E+
Sbjct: 376 VRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVEL 435
Query: 11 GEL 3
EL
Sbjct: 436 AEL 438
Score = 150 bits (380), Expect = 2e-34
Identities = 94/234 (40%), Positives = 122/234 (52%), Gaps = 23/234 (9%)
Frame = -3
Query: 659 LKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFVLKA 480
L NA +LFD+IPK N+FLWNVLIRGYAWNGP+ AI LY++M+++GL PDNFT PFVLKA
Sbjct: 98 LLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKA 157
Query: 479 CAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC-----*YCCLAEREGASW 315
C+ALS I GR IHE +SG E D FVGAALIDMY KCG + + R+ W
Sbjct: 158 CSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLW 217
Query: 314 I*LETRMIQ-----------------VTRPNHITFVGVLSACNHGGLLDEGRNVFE-SMK 189
+ Q RP T V V+S+ L GR + +
Sbjct: 218 NSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWR 277
Query: 188 KDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIH 27
++ V T +ID+ CG + A L +R W A++ +H
Sbjct: 278 HGFQSNDKV--KTALIDMYAKCGSVKVALALFERLREKRVVS-WNAIITGYAMH 328
>ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 186 bits (471), Expect = 5e-45
Identities = 105/243 (43%), Positives = 142/243 (58%), Gaps = 21/243 (8%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
C +++A +FD+I + ++ WN ++ Y+ NG +++L M GL P T+
Sbjct: 150 CGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVIS 209
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC*YC-----CLAEREG 324
+ A A + G+++H + R G E++ V AL+DMY K GS L E+
Sbjct: 210 IAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRV 269
Query: 323 ASW----------------I*LETRMIQVTRPNHITFVGVLSACNHGGLLDEGRNVFESM 192
SW + L M P+HITFVGVL+AC+HGGLL+EG+ F SM
Sbjct: 270 VSWNAMITGYAMHGHANEALDLFKEMKGKVLPDHITFVGVLAACSHGGLLNEGKMHFRSM 329
Query: 191 KKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIHRNMEM 12
D+ I PTV HYTCMIDLLGHCGRL+EAY LI MR+ PD+GVWGALL+S KIH N+EM
Sbjct: 330 ISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEM 389
Query: 11 GEL 3
GEL
Sbjct: 390 GEL 392
Score = 164 bits (416), Expect = 1e-38
Identities = 99/239 (41%), Positives = 137/239 (57%), Gaps = 25/239 (10%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
C+ L NAH LFDRI K N+FLWNV+IRGYAWNGPY+ AISLYYQM ++GLVPD FT+PFV
Sbjct: 49 CNSLTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFV 108
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC-----*YCCLAEREG 324
LKAC+ALS ++ G+ IH++ RSGLE+D FVGAALIDMY KCG + + ER+
Sbjct: 109 LKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDV 168
Query: 323 ASWI*LETRMIQVTRPNHI-----------------TFVGVLSACNHGGLLDEGRNVF-E 198
W + Q +P+ TFV ++A GLL +G+ +
Sbjct: 169 VCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGY 228
Query: 197 SMKKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGV--WGALLNSSKIH 27
S + + V T ++D+ G ++ A +L +L + V W A++ +H
Sbjct: 229 SWRHGFESNDKV--KTALMDMYAKSGSVNVARSL---FELLEEKRVVSWNAMITGYAMH 282
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 181 bits (459), Expect = 1e-43
Identities = 93/243 (38%), Positives = 143/243 (58%), Gaps = 22/243 (9%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
C + +A+ LF+R+PK N+ WN +I GY+ +G A++L+ +M G+ PD+F V
Sbjct: 370 CGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSV 429
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC*-----YCCLAEREG 324
L ACA ++ G+ IH T RSG E++ VG L+D+Y KCG+ + + E++
Sbjct: 430 LPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDV 489
Query: 323 ASW----------------I*LETRMIQV-TRPNHITFVGVLSACNHGGLLDEGRNVFES 195
SW + L ++M + T+ +HI F +L+AC+H GL+D+G F+
Sbjct: 490 VSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQC 549
Query: 194 MKKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIHRNME 15
MK DY + P + HY C++DLLG G LDEA +I M + PD+ VWGALL + +IH N+E
Sbjct: 550 MKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIE 609
Query: 14 MGE 6
+GE
Sbjct: 610 LGE 612
Score = 105 bits (262), Expect = 8e-21
Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 25/239 (10%)
Frame = -3
Query: 668 CDFLKNAHHLFDRIPKGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFV 489
C L+NA +FDR+PK ++ WN +I GY+ NG A++L+ +M G+ P++ T V
Sbjct: 168 CGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSV 227
Query: 488 LKACAALSDIKVGRDIHENTTRSGLETDFFVGAALIDMYVKCGSC-----*YCCLAEREG 324
+ CA L ++ G+ IH RSG+E+D V L++MY KCG+ + + R+
Sbjct: 228 MPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDV 287
Query: 323 ASW----------------I*LETRM-IQVTRPNHITFVGVLSACNHGGLLDEGRNVF-E 198
ASW + RM ++ +PN IT V VL AC H L++G+ +
Sbjct: 288 ASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGY 347
Query: 197 SMKKDYRIEPTV*HYTCMIDLLGHCGRLDEAYNLITAMRMLPDSGV--WGALLNSSKIH 27
+++ + V ++++ CG ++ AY L M P V W A+++ H
Sbjct: 348 AIRSGFESNDVV--GNALVNMYAKCGNVNSAYKLFERM---PKKNVVAWNAIISGYSQH 401
Score = 97.8 bits (242), Expect = 2e-18
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 22/221 (9%)
Frame = -3
Query: 623 KGNIFLWNVLIRGYAWNGPYQAAISLYYQMVEFGLVPDNFTYPFVLKACAALSDIKVGRD 444
+ N +W I GY NG + A+ LYYQM G+ PD + V+KAC + SD++ GR
Sbjct: 82 RNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRK 141
Query: 443 IHENTTRSGLETDFFVGAALIDMYVKCGSC-----*YCCLAEREGASW------------ 315
+HE+ G E+D VG AL MY KCGS + + +R+ SW
Sbjct: 142 VHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQ 201
Query: 314 ----I*LETRM-IQVTRPNHITFVGVLSACNHGGLLDEGRNVFESMKKDYRIEPTV*HYT 150
+ L + M + +PN T V V+ C H L++G+ + + IE V
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS-GIESDVLVVN 260
Query: 149 CMIDLLGHCGRLDEAYNLITAMRMLPDSGVWGALLNSSKIH 27
++++ CG ++ A+ L M + D W A++ ++
Sbjct: 261 GLVNMYAKCGNVNTAHKLFERM-PIRDVASWNAIIGGYSLN 300