BLASTX nr result

ID: Cnidium21_contig00040771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040771
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44336.1| unknown [Lotus japonicus]                               60   2e-07
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...    59   5e-07
gb|ABO92988.1| F-box domain-containing protein [Solanum tuberosum]     59   5e-07
gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]    59   5e-07
ref|XP_002526393.1| hypothetical protein RCOM_1028290 [Ricinus c...    58   7e-07

>gb|AFK44336.1| unknown [Lotus japonicus]
          Length = 193

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/51 (58%), Positives = 36/51 (70%)
 Frame = +1

Query: 142 AMAILNDLTDALLSIILIRLPVKSLMQCICVSKSWYNLVSDPYFIRSHLSL 294
           AMA+   L D L+  IL RLPVKSL++  CV KSW  L+SDPYFI+ HL L
Sbjct: 56  AMAVATFLPDELVVEILSRLPVKSLLKFRCVCKSWMLLISDPYFIKKHLHL 106


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
           gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/46 (60%), Positives = 34/46 (73%)
 Frame = +1

Query: 163 LTDALLSIILIRLPVKSLMQCICVSKSWYNLVSDPYFIRSHLSLKS 300
           L D L+  IL RLPVKSL+Q  CV KSW +L+SDPYF++ HL L S
Sbjct: 49  LPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSS 94


>gb|ABO92988.1| F-box domain-containing protein [Solanum tuberosum]
          Length = 424

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/61 (42%), Positives = 40/61 (65%)
 Frame = +1

Query: 163 LTDALLSIILIRLPVKSLMQCICVSKSWYNLVSDPYFIRSHLSLKSADEEEYLVTGFLRD 342
           L + +++ IL+RLP KSL++C+CVSKSW+ L+S P F+ +HL L        L +G   +
Sbjct: 44  LPNEIITAILLRLPTKSLLKCMCVSKSWHQLISSPDFVNTHLKLNK--HHRVLFSGIFEN 101

Query: 343 I 345
           I
Sbjct: 102 I 102


>gb|AAT38719.1| Putative F-Box protein, identical [Solanum demissum]
          Length = 327

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/53 (47%), Positives = 42/53 (79%)
 Frame = +1

Query: 163 LTDALLSIILIRLPVKSLMQCICVSKSWYNLVSDPYFIRSHLSLKSADEEEYL 321
           L D L++ IL++LP+KSL++ +CVSKSW  L+S P F+++H+ L +AD++ Y+
Sbjct: 12  LPDELITEILLKLPIKSLLKFMCVSKSWLQLISSPAFVKNHIKL-TADDKGYI 63


>ref|XP_002526393.1| hypothetical protein RCOM_1028290 [Ricinus communis]
           gi|223534255|gb|EEF35969.1| hypothetical protein
           RCOM_1028290 [Ricinus communis]
          Length = 147

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/48 (56%), Positives = 39/48 (81%)
 Frame = +1

Query: 187 ILIRLPVKSLMQCICVSKSWYNLVSDPYFIRSHLSLKSADEEEYLVTG 330
           IL+RLPVK L++  CVSK+WY+L+SDP FI+SHL L S + ++++V G
Sbjct: 12  ILLRLPVKPLLRFKCVSKTWYSLISDPCFIKSHLQL-SNNHKKFVVNG 58


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