BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040754
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P93119.1|TOP1_DAUCA RecName: Full=DNA topoisomerase 1; AltNam...   204   5e-51
ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinife...   192   2e-47
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               192   3e-47
dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. g...   189   3e-46
dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]       189   3e-46

>sp|P93119.1|TOP1_DAUCA RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase
           I gi|1800221|gb|AAB41401.1| topoisomerase I [Daucus
           carota]
          Length = 790

 Score =  204 bits (520), Expect = 5e-51
 Identities = 101/128 (78%), Positives = 108/128 (84%)
 Frame = -1

Query: 386 LVHNGVIFPPLYKPHGVKMLYKGNPVNLTPEQEEVASLATMFAVMLDTEYMTKPKFKENF 207
           LVHNGVIFPPLYKPHGVKMLY+ NPV+LTPEQEEVA   TMFAVML+TEYMTKPKF+ENF
Sbjct: 220 LVHNGVIFPPLYKPHGVKMLYRENPVDLTPEQEEVA---TMFAVMLETEYMTKPKFRENF 276

Query: 206 MSDWKKILGNKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTDVIKGFLCAGEESHKRRKD 27
           MSDW+KILG KHIIQNLEDCDFTPIYEWHQREKEKKKQMSTD  K          K  KD
Sbjct: 277 MSDWRKILGEKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTDEKKAI--------KEGKD 328

Query: 26  ETRREVYV 3
           ETR+E Y+
Sbjct: 329 ETRKEKYM 336


>ref|XP_002266885.1| PREDICTED: DNA topoisomerase 1 [Vitis vinifera]
           gi|296082698|emb|CBI21703.3| unnamed protein product
           [Vitis vinifera]
          Length = 857

 Score =  192 bits (489), Expect = 2e-47
 Identities = 89/107 (83%), Positives = 96/107 (89%)
 Frame = -1

Query: 401 QKWTTLVHNGVIFPPLYKPHGVKMLYKGNPVNLTPEQEEVASLATMFAVMLDTEYMTKPK 222
           QKWTTLVHNGVIFPP YKPHGVKMLYKG PV+LTPEQEEVA   TMFAVMLDT+YM K K
Sbjct: 314 QKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVA---TMFAVMLDTDYMQKEK 370

Query: 221 FKENFMSDWKKILGNKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTD 81
           FKENFM+DW+KILG  H+IQ L+DCDFTPIYEWHQ EKEKKKQMST+
Sbjct: 371 FKENFMADWRKILGKNHVIQRLDDCDFTPIYEWHQEEKEKKKQMSTE 417


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  192 bits (487), Expect = 3e-47
 Identities = 88/107 (82%), Positives = 96/107 (89%)
 Frame = -1

Query: 401 QKWTTLVHNGVIFPPLYKPHGVKMLYKGNPVNLTPEQEEVASLATMFAVMLDTEYMTKPK 222
           +KW TLVHNGVIFPP YKPHGVKMLYKG PV+LTPEQEEVA   TMFAVMLDT+YMTK K
Sbjct: 350 KKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVA---TMFAVMLDTDYMTKSK 406

Query: 221 FKENFMSDWKKILGNKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTD 81
           FKENFM DW+KILG  H+IQNLEDCDFTPIYEWHQREKEKKK+M+ +
Sbjct: 407 FKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAE 453


>dbj|BAK32962.1| topoisomerase I [Ophiorrhiza trichocarpon var. glabra]
          Length = 920

 Score =  189 bits (479), Expect = 3e-46
 Identities = 87/107 (81%), Positives = 94/107 (87%)
 Frame = -1

Query: 401 QKWTTLVHNGVIFPPLYKPHGVKMLYKGNPVNLTPEQEEVASLATMFAVMLDTEYMTKPK 222
           QKWTTLVHNGVIFPP YKPHGVKMLYK  P+ LTPEQEEVA   TMFAVMLDT+YM KP+
Sbjct: 381 QKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVA---TMFAVMLDTDYMNKPR 437

Query: 221 FKENFMSDWKKILGNKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTD 81
           FKENF SDWKK+LG  H IQNLEDCDF PIYEWHQ+EKEKKKQM+T+
Sbjct: 438 FKENFFSDWKKMLGKNHTIQNLEDCDFGPIYEWHQQEKEKKKQMTTE 484


>dbj|BAK32960.1| topoisomerase I [Ophiorrhiza pseudofasciculata]
          Length = 925

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/107 (82%), Positives = 94/107 (87%)
 Frame = -1

Query: 401 QKWTTLVHNGVIFPPLYKPHGVKMLYKGNPVNLTPEQEEVASLATMFAVMLDTEYMTKPK 222
           QKWTTLVHNGVIFPP YKPHGVKMLYK  P+ LTPEQEEVA   TMFAVMLDT+YM KP 
Sbjct: 380 QKWTTLVHNGVIFPPPYKPHGVKMLYKRQPITLTPEQEEVA---TMFAVMLDTDYMNKPC 436

Query: 221 FKENFMSDWKKILGNKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTD 81
           FKENF SDWKKILG  H+IQNLEDCDF PIYEWHQ+EKEKKKQM+T+
Sbjct: 437 FKENFFSDWKKILGKNHMIQNLEDCDFGPIYEWHQQEKEKKKQMTTE 483