BLASTX nr result

ID: Cnidium21_contig00040717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040717
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525885.1| PREDICTED: uncharacterized protein LOC100798...    84   1e-14
ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ri...    83   2e-14
ref|XP_002304286.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_003549919.1| PREDICTED: uncharacterized protein LOC100808...    81   8e-14
ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854...    79   4e-13

>ref|XP_003525885.1| PREDICTED: uncharacterized protein LOC100798536 [Glycine max]
          Length = 845

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 73/198 (36%), Positives = 85/198 (42%), Gaps = 58/198 (29%)
 Frame = +3

Query: 15   DLQARPSQDFATENYMMP-VEPFGYNPYWNRMQPENYLM---------------PVSIPL 146
            DLQ +   DF  ENYMMP V P GYN YWN MQP +  M               P+ +P 
Sbjct: 487  DLQWKTPHDFGAENYMMPMVPPAGYNSYWNGMQPMDGFMAPYGNPMQMMGYGLGPLDMPF 546

Query: 147  GGAFYQDPFGAQVYM--PFPPQRDLAELG------------------------------- 227
            GG   QDPFG Q YM   FPP RDLA+                                 
Sbjct: 547  GG-MPQDPFGMQGYMMPGFPPHRDLADFSMGMNAPAPVMSREEFEARKADMRRKRENDRR 605

Query: 228  --TDF--DGGGGRDMISQEDVPSAKSKIWLQKSTPP----ERHQPQPRSERRSPDHITRF 383
               DF  D   GR++ S  DV S KSK    +S PP    + H P+ RSER SPD   R 
Sbjct: 606  PERDFSKDRDFGREVSSVGDVSSMKSK---TRSIPPSSGSDYHHPRFRSERHSPDRSPRE 662

Query: 384  PE-ILRSSSKRKVKHDDD 434
             E      +KRK  H+ D
Sbjct: 663  VEPPPPRPTKRKSDHNSD 680


>ref|XP_002530663.1| retinoblastoma-binding protein, putative [Ricinus communis]
            gi|223529796|gb|EEF31732.1| retinoblastoma-binding
            protein, putative [Ricinus communis]
          Length = 868

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 66/198 (33%), Positives = 84/198 (42%), Gaps = 62/198 (31%)
 Frame = +3

Query: 27   RPSQDFATENYMMPVEPFGYNPYWNRMQP--ENYLMPVS-----------------IPLG 149
            + SQD ATE+YMMP+ P  YNPYWN MQP  E+Y+ P++                 +P G
Sbjct: 492  KASQDLATESYMMPLGPSAYNPYWNGMQPGMESYMNPMNPFAAPMPFMGYGMGPLDMPFG 551

Query: 150  GAFYQDPFGAQVYM--PFPPQRDLAELGTDFDGGG------------------------- 248
            G    DPF AQ YM    PPQRDLA+ G   + G                          
Sbjct: 552  GVMPPDPFSAQGYMMPVVPPQRDLADFGMGMNAGPPAMSREEFEARKADLRRRRENERRA 611

Query: 249  ----------GRDMISQEDVPSAKSKIWLQKSTPPERH-QPQPRSERRSPDHITR----- 380
                      GR++ S  D+ S KSK   Q S   + H   + RSER SP+   R     
Sbjct: 612  EREFPRDREFGREVSSGVDISSMKSKPIPQPSRSGDPHPHHRHRSERSSPERPVRDLEPP 671

Query: 381  FPEILRSSSKRKVKHDDD 434
             P   R S ++   HD D
Sbjct: 672  APPPPRPSKRKADHHDRD 689


>ref|XP_002304286.1| predicted protein [Populus trichocarpa] gi|222841718|gb|EEE79265.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 62/189 (32%), Positives = 81/189 (42%), Gaps = 55/189 (29%)
 Frame = +3

Query: 27  RPSQDFATENYMMPVEPFGYNPYWNRMQP--ENY--------------LMPVSIPLGGAF 158
           + SQD A E++MMP+ P  +NPYW+ MQ   E Y              L P+ +P GG  
Sbjct: 173 KASQDLAAESFMMPMGPSAFNPYWSGMQTGMEGYMAPYPGPMPFMGYGLSPLDMPYGGVM 232

Query: 159 YQDPFGAQVYM--PFPPQRDLAELGTDF-------------------------------- 236
             DPFGAQ YM    PPQRDLAE G +                                 
Sbjct: 233 PPDPFGAQSYMMPAVPPQRDLAEFGMNMNLRPPLMSREEFEARKADVRRRRENERRAERE 292

Query: 237 ---DGGGGRDMISQEDVPSAKSKIWLQKSTPPERHQPQPRSERRSPDHITRFPEIL--RS 401
              D   GR++    DV S KSK   Q S   + H  + RSER SP+   R  + L  R 
Sbjct: 293 FSRDWDPGREVSGGGDVSSMKSKSIPQSSASGDPHHNRRRSERLSPERSAREIDPLPPRP 352

Query: 402 SSKRKVKHD 428
           S ++  +H+
Sbjct: 353 SKRKSDRHE 361


>ref|XP_003549919.1| PREDICTED: uncharacterized protein LOC100808703 [Glycine max]
          Length = 849

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 73/202 (36%), Positives = 86/202 (42%), Gaps = 62/202 (30%)
 Frame = +3

Query: 15   DLQARPSQDFATENYMMP-----VEPFGYNPYWNRMQPENYLM---------------PV 134
            DLQ +   DF  ENYMM      V P GYN YWN MQP +  M               P+
Sbjct: 487  DLQWKTPHDFGAENYMMNNMMPMVPPPGYNSYWNGMQPMDGFMAPYGNPMQMMGYGLGPL 546

Query: 135  SIPLGGAFYQDPFGAQVYM--PFPPQRDLAELG--------------------------- 227
             +P GG   QDPFG Q YM   FPP RDLA+                             
Sbjct: 547  DMPFGG-MPQDPFGMQGYMMPGFPPHRDLADFSMGMNVPPPVMSREEFEARKADMRRKRE 605

Query: 228  ------TDF--DGGGGRDMISQEDVPSAKSKIWLQKSTPP----ERHQPQPRSERRSPDH 371
                   DF  D   GR++ S  DV S KSK    +S PP    + HQP+ RSER SPD 
Sbjct: 606  NDRRPERDFSKDRDFGREVSSVGDVSSMKSK---TRSIPPSSGSDYHQPRFRSERHSPDR 662

Query: 372  ITRFPE-ILRSSSKRKVKHDDD 434
              R  E      +KRK++H  D
Sbjct: 663  SPRDVEPPPPRPTKRKLEHHSD 684


>ref|XP_003635247.1| PREDICTED: uncharacterized protein LOC100854867 [Vitis vinifera]
          Length = 823

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 65/193 (33%), Positives = 84/193 (43%), Gaps = 55/193 (28%)
 Frame = +3

Query: 12   ADLQARPSQDFATENYMMPVEPFGYNPYWNRMQP--ENYLMP--------------VSIP 143
            AD+Q + +QD A ENYMMP++P  Y PYWN MQP  + ++ P              + +P
Sbjct: 489  ADIQWKSTQDLAAENYMMPMDP-TYAPYWNGMQPGMDGFMNPYAGAMPYMGYGYNTLDMP 547

Query: 144  LGGAFYQDPFGAQVYM--PFPPQRDLAELGTDF--------------------------- 236
             GG   Q PFGA  YM    PPQRDLA+ G                              
Sbjct: 548  FGGVLPQGPFGAPGYMLPVVPPQRDLADFGMGLNAAPPVMSREEFEARKADLRRRRESER 607

Query: 237  ---------DGGGGRDMISQEDVPSAKSKIWL-QKSTPPERHQPQPRSERRSPDHITRFP 386
                     D   GR+     DV + K K  L  +S+  + H  +PR ER SP+  TR  
Sbjct: 608  RGESKEFPKDREYGREGSMGGDVSTMKPKPKLAPQSSSADHHHRRPRPERSSPERPTRDV 667

Query: 387  EILRSSSKRKVKH 425
            E  R  SKRK +H
Sbjct: 668  EAPR-PSKRKSEH 679


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