BLASTX nr result

ID: Cnidium21_contig00040696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040696
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   131   6e-29
emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]   130   1e-28
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   130   1e-28
ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like...   127   7e-28

>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  131 bits (329), Expect = 6e-29
 Identities = 72/147 (48%), Positives = 94/147 (63%), Gaps = 14/147 (9%)
 Frame = -2

Query: 415 VCKYKKSDGLIDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHPNCPLCRAN 236
           VCKYK+ DGL++G DC+VCLSEFQE+ESLRLLPKCSHAFHL CIDTWL+SH NCPLCRAN
Sbjct: 129 VCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRAN 188

Query: 235 VISFTP-LPLQGNSSTHY---NASSLQVTMQNDLVLI-------IDNPDIIHQNEVFDVM 89
           +IS     P+Q  +ST Y   N +  + +  ND   +         N D  +    F  +
Sbjct: 189 IISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGKNSVRAFSDL 248

Query: 88  GNSSNQES--ELQE-NYQEITRSYSRE 17
           GN   +++  EL++   Q+I RS S +
Sbjct: 249 GNLEKRDTIIELRDGRLQQIRRSISMD 275


>emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
          Length = 1377

 Score =  130 bits (327), Expect = 1e-28
 Identities = 67/152 (44%), Positives = 90/152 (59%), Gaps = 21/152 (13%)
 Frame = -2

Query: 415  VCKYKKSDGLIDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHPNCPLCRAN 236
            +CKYKK DGL++G DC+VCLSEF+E+ESLRLLPKCSHAFH+ CIDTWL+SH NCPLCRAN
Sbjct: 1129 LCKYKKGDGLVEGTDCSVCLSEFEEDESLRLLPKCSHAFHVQCIDTWLKSHSNCPLCRAN 1188

Query: 235  VISFT-----------PLPLQGNSSTHYNASSLQVTMQNDLVLIIDNPDIIHQ------- 110
            ++  T             PL    S         V +  DL  + +  +I+         
Sbjct: 1189 IVPTTVSPTQLPPPVMEXPLNNEPSQQSQLEHENVAVGEDLERVAEEEEIMRNEVIPKTP 1248

Query: 109  NEVFDVMGNSSNQESELQ---ENYQEITRSYS 23
            + VF  +GNS  +++ ++   E  Q+I RS S
Sbjct: 1249 SRVFSDLGNSEERDTIIEIRDEGEQQIRRSIS 1280


>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  130 bits (326), Expect = 1e-28
 Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 21/159 (13%)
 Frame = -2

Query: 415 VCKYKKSDGLIDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHPNCPLCRAN 236
           +CKYKK DGL++G DC+VCLSEF+E ESLRLLPKCSHAFH+ CIDTWL+SH NCPLCRAN
Sbjct: 127 LCKYKKGDGLVEGTDCSVCLSEFEEEESLRLLPKCSHAFHVQCIDTWLKSHSNCPLCRAN 186

Query: 235 VISFT-----------PLPLQGNSSTHYNASSLQVTMQNDLVLIIDNPDIIHQ------- 110
           ++  T             PL    S         V +  DL  + +  +I+         
Sbjct: 187 IVPTTVSPTQLPPPVMESPLNNEPSQQSQLEHENVAVGEDLERVAEEEEIMRNEVIPKTP 246

Query: 109 NEVFDVMGNSSNQESELQ---ENYQEITRSYSRESQQCQ 2
           + VF  +GNS  +++ ++   E  Q+I RS S +   CQ
Sbjct: 247 SRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLD-YSCQ 284


>ref|XP_002303424.1| predicted protein [Populus trichocarpa] gi|222840856|gb|EEE78403.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/108 (54%), Positives = 77/108 (71%), Gaps = 4/108 (3%)
 Frame = -2

Query: 415 VCKYKKSDGLIDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHPNCPLCRAN 236
           VCKYKK DGLI+G DC+VCLSEF+E+ES+RLLPKCSHAFH+PCIDTWLRSH NCPLCRAN
Sbjct: 129 VCKYKKGDGLIEGTDCSVCLSEFEEDESIRLLPKCSHAFHVPCIDTWLRSHSNCPLCRAN 188

Query: 235 VISFT----PLPLQGNSSTHYNASSLQVTMQNDLVLIIDNPDIIHQNE 104
           ++ F+     LP     +   N S  +    N+ V +  + + + ++E
Sbjct: 189 IVFFSASLPQLPPPVTETPQGNESLQESQRANENVSVTQDTERVARDE 236


>ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
           gi|449487632|ref|XP_004157723.1| PREDICTED: RING-H2
           finger protein ATL51-like [Cucumis sativus]
          Length = 382

 Score =  127 bits (320), Expect = 7e-28
 Identities = 64/132 (48%), Positives = 85/132 (64%), Gaps = 11/132 (8%)
 Frame = -2

Query: 415 VCKYKKSDGLIDGVDCAVCLSEFQENESLRLLPKCSHAFHLPCIDTWLRSHPNCPLCRAN 236
           VCKYK+ DGL++G DC+VCLSEFQENESLRLLPKCSHAFHLPCIDTWL+SH  CPLCR+N
Sbjct: 129 VCKYKRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSN 188

Query: 235 V--ISFTPLPLQGNSST-HYNASSLQVTMQ---NDLVLII-----DNPDIIHQNEVFDVM 89
           +   +    P Q   +T H+ +S+ Q   Q   ND ++++     D+  ++ Q  V   +
Sbjct: 189 ISPTNLFSTPTQEIQTTQHFVSSAFQYQHQHRTNDTIVVVVVQDLDDLTVVRQETVDSRL 248

Query: 88  GNSSNQESELQE 53
            N        +E
Sbjct: 249 ENDDASSKNQRE 260


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