BLASTX nr result

ID: Cnidium21_contig00040645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040645
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308313.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_003609240.1| Potassium channel [Medicago truncatula] gi|3...    83   3e-14
ref|XP_002282442.1| PREDICTED: potassium channel AKT1 [Vitis vin...    82   3e-14
emb|CBW30481.1| inward rectifying shaker-like K+ channel [Vitis ...    81   8e-14
emb|CAN78157.1| hypothetical protein VITISV_032798 [Vitis vinifera]    81   8e-14

>ref|XP_002308313.1| predicted protein [Populus trichocarpa] gi|222854289|gb|EEE91836.1|
            predicted protein [Populus trichocarpa]
          Length = 848

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
 Frame = +2

Query: 5    KYQSEPTLPPPYEDGTSSMIGDRW-----RRRNNKFDNSLFGIISAARNLGKAGKQQTLS 169
            ++ SEPT+ P  ++G+       W     RRR N F NS+FG++SAA      GK+  L 
Sbjct: 704  RFTSEPTIRPLSQEGSFPATDASWSQTRPRRRTNNFHNSIFGMMSAAHR----GKKDLLF 759

Query: 170  PVEYERLRASSIARVTIHCPEEYQTSAVLVFLPESLEELLEVGSQRFRFSPTKVLTK 340
            P+ +     +S ARVTI CPE+ + +  LV LP S + LLE+G+++F  SP KV++K
Sbjct: 760  PISHTSGHGASPARVTISCPEKEEVAGKLVLLPNSFQALLEIGAKKFDISPAKVMSK 816


>ref|XP_003609240.1| Potassium channel [Medicago truncatula] gi|355510295|gb|AES91437.1|
            Potassium channel [Medicago truncatula]
          Length = 888

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 52/120 (43%), Positives = 74/120 (61%), Gaps = 8/120 (6%)
 Frame = +2

Query: 5    KYQSEPTLPPPYEDGT-----SSMIGDRWRRRNNKFDNSLFGIISAARNLGKAGKQQTLS 169
            ++ SEPT+P P +DG+      S I +R RR+NN F NSLFGI+SAA   G+  +  ++ 
Sbjct: 732  RFTSEPTMPTP-QDGSFHGNDGSWIQNRPRRKNNNFHNSLFGIMSAATK-GENDQFFSVQ 789

Query: 170  PVEYERLRASSI---ARVTIHCPEEYQTSAVLVFLPESLEELLEVGSQRFRFSPTKVLTK 340
                 R    S+    RVTI CPE+ + +  LV LPES +ELLE+GS++F    TKV++K
Sbjct: 790  TNNNARNGVKSVLRPTRVTISCPEKCEVAGKLVLLPESFKELLEIGSKKFGIVATKVVSK 849


>ref|XP_002282442.1| PREDICTED: potassium channel AKT1 [Vitis vinifera]
            gi|296081992|emb|CBI20997.3| unnamed protein product
            [Vitis vinifera]
          Length = 898

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
 Frame = +2

Query: 5    KYQSEPTLPPPYEDGTSSMIGDRW------RRRNNKFDNSLFGIISAARNLGKAGKQQTL 166
            K++S+  L P   D  S+ +   W      RRR N F+NSLFGI+S+     + G  ++ 
Sbjct: 739  KFKSDSYLQPFQHDRESTGLEVSWIDDNRPRRRVNNFNNSLFGIMSSVNTRERKGFIRSA 798

Query: 167  SPVEYERLRASSIARVTIHCPEEYQTSAVLVFLPESLEELLEVGSQRFRFSPTKVLTK 340
            +       +    ARVT+ CPE+ + +  LV LP+SL+ELL++G+++F+FSPTKV+TK
Sbjct: 799  ASFATSPRQRDFPARVTLSCPEKGEVAGKLVPLPQSLQELLDIGAKKFKFSPTKVVTK 856


>emb|CBW30481.1| inward rectifying shaker-like K+ channel [Vitis vinifera]
            gi|310913174|emb|CBW30482.1| inward rectifying
            shaker-like K+ channel [Vitis vinifera]
          Length = 898

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
 Frame = +2

Query: 5    KYQSEPTLPPPYEDGTSSMIGDRW------RRRNNKFDNSLFGIISAARNLGKAGKQQTL 166
            K++S+  L P   D  S+ +   W      RRR N F+NSLFGI+S+     + G  ++ 
Sbjct: 739  KFKSDSYLQPFQHDRESTGLEVSWIDDNRPRRRVNNFNNSLFGIMSSVNTRERKGFIRSA 798

Query: 167  SPVEYERLRASSIARVTIHCPEEYQTSAVLVFLPESLEELLEVGSQRFRFSPTKVLTK 340
            +       +    ARVT+ CP++ + +  LV LP+SL+ELL++G+++F+FSPTKV+TK
Sbjct: 799  ASFATSPRQRDFPARVTLSCPQKGEVAGKLVPLPQSLQELLDIGAKKFKFSPTKVVTK 856


>emb|CAN78157.1| hypothetical protein VITISV_032798 [Vitis vinifera]
          Length = 898

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/118 (38%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
 Frame = +2

Query: 5    KYQSEPTLPPPYEDGTSSMIGDRW------RRRNNKFDNSLFGIISAARNLGKAGKQQTL 166
            K++S+  L P   D  S+ +   W      RRR N F+NSLFGI+S+     + G  ++ 
Sbjct: 739  KFKSDSYLQPFQHDRESTGLEVSWIDDNRPRRRVNNFNNSLFGIMSSVNTRERKGFIRSA 798

Query: 167  SPVEYERLRASSIARVTIHCPEEYQTSAVLVFLPESLEELLEVGSQRFRFSPTKVLTK 340
            +       +    ARVT+ CP++ + +  LV LP+SL+ELL++G+++F+FSPTKV+TK
Sbjct: 799  ASFATSPRQRDFPARVTLSCPQKGEVAGKLVPLPQSLQELLDIGAKKFKFSPTKVVTK 856


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