BLASTX nr result
ID: Cnidium21_contig00040558
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00040558 (377 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278121.2| PREDICTED: LOB domain-containing protein 12-... 92 6e-17 emb|CAN68873.1| hypothetical protein VITISV_026576 [Vitis vinifera] 92 6e-17 ref|XP_002298499.1| predicted protein [Populus trichocarpa] gi|2... 89 4e-16 ref|XP_002311246.1| predicted protein [Populus trichocarpa] gi|2... 83 2e-14 ref|XP_003537315.1| PREDICTED: LOB domain-containing protein 12-... 82 5e-14 >ref|XP_002278121.2| PREDICTED: LOB domain-containing protein 12-like [Vitis vinifera] gi|297745838|emb|CBI15894.3| unnamed protein product [Vitis vinifera] Length = 163 Score = 91.7 bits (226), Expect = 6e-17 Identities = 60/106 (56%), Positives = 68/106 (64%) Frame = +1 Query: 1 YGCVGAISYLQNQVSQLQMQLAVAQAEILCFXXXXXXXXXXXXXXXPNNIPITTTQQMIM 180 YGCVGAISYLQNQVSQLQMQLAVAQ EILC P TQ M Sbjct: 79 YGCVGAISYLQNQVSQLQMQLAVAQTEILCI-------------QMQQEEPALPTQ---M 122 Query: 181 SPDEKSLLLSTSNFDYNLLQQQYLNFGSTTSNIVMQDPPKRESLWT 318 DEKSLLLS ++F+ NL Q YL+F S+++ V+QDP KRESLWT Sbjct: 123 DQDEKSLLLSNNSFN-NL--QHYLSFASSSN--VIQDPLKRESLWT 163 >emb|CAN68873.1| hypothetical protein VITISV_026576 [Vitis vinifera] Length = 163 Score = 91.7 bits (226), Expect = 6e-17 Identities = 60/106 (56%), Positives = 68/106 (64%) Frame = +1 Query: 1 YGCVGAISYLQNQVSQLQMQLAVAQAEILCFXXXXXXXXXXXXXXXPNNIPITTTQQMIM 180 YGCVGAISYLQNQVSQLQMQLAVAQ EILC P TQ M Sbjct: 79 YGCVGAISYLQNQVSQLQMQLAVAQTEILCI-------------QMQQEEPALPTQ---M 122 Query: 181 SPDEKSLLLSTSNFDYNLLQQQYLNFGSTTSNIVMQDPPKRESLWT 318 DEKSLLLS ++F+ NL Q YL+F S+++ V+QDP KRESLWT Sbjct: 123 DQDEKSLLLSNNSFN-NL--QHYLSFASSSN--VIQDPLKRESLWT 163 >ref|XP_002298499.1| predicted protein [Populus trichocarpa] gi|222845757|gb|EEE83304.1| predicted protein [Populus trichocarpa] Length = 163 Score = 89.0 bits (219), Expect = 4e-16 Identities = 57/106 (53%), Positives = 68/106 (64%) Frame = +1 Query: 1 YGCVGAISYLQNQVSQLQMQLAVAQAEILCFXXXXXXXXXXXXXXXPNNIPITTTQQMIM 180 YGCVGAISYLQNQVSQLQMQLAVAQAEILC N+P Q Sbjct: 79 YGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQEP-----------NLPTQLDQ---- 123 Query: 181 SPDEKSLLLSTSNFDYNLLQQQYLNFGSTTSNIVMQDPPKRESLWT 318 D+KSLLL++ N ++N + QY NF S+++ V+QDP KRESLWT Sbjct: 124 --DDKSLLLASCN-NFNSI-PQYFNFASSSN--VIQDPLKRESLWT 163 >ref|XP_002311246.1| predicted protein [Populus trichocarpa] gi|222851066|gb|EEE88613.1| predicted protein [Populus trichocarpa] Length = 164 Score = 83.2 bits (204), Expect = 2e-14 Identities = 53/105 (50%), Positives = 63/105 (60%) Frame = +1 Query: 1 YGCVGAISYLQNQVSQLQMQLAVAQAEILCFXXXXXXXXXXXXXXXPNNIPITTTQQMIM 180 YGCVGAISYLQNQVSQLQMQLAVAQAEILC + P+ T Q M Sbjct: 79 YGCVGAISYLQNQVSQLQMQLAVAQAEILCIQM--------------QHEPVMPTPQ--M 122 Query: 181 SPDEKSLLLSTSNFDYNLLQQQYLNFGSTTSNIVMQDPPKRESLW 315 P++KS LL S QYLNFGS +SN++ D KRE+++ Sbjct: 123 DPEDKSFLLQNS-------LPQYLNFGS-SSNVIQYDSLKRETIF 159 >ref|XP_003537315.1| PREDICTED: LOB domain-containing protein 12-like [Glycine max] Length = 172 Score = 82.0 bits (201), Expect = 5e-14 Identities = 56/111 (50%), Positives = 67/111 (60%), Gaps = 5/111 (4%) Frame = +1 Query: 1 YGCVGAISYLQNQVSQLQMQLAVAQAEILCFXXXXXXXXXXXXXXXPNNIPITTTQQMIM 180 YGCVGAISYLQNQVSQLQMQLAVAQ EILC P TQ ++ Sbjct: 79 YGCVGAISYLQNQVSQLQMQLAVAQTEILCI-------------QMQQQEPTLATQ--LV 123 Query: 181 SPDEKSLLLSTSNFDYNLLQQQYLNF--GSTTSNIVMQDPP---KRESLWT 318 D+KS+LLS +N +Y +L Q+L F S++S+ V QDP KRES WT Sbjct: 124 DQDDKSMLLSVNN-NYEML-PQFLKFPSSSSSSSNVFQDPHEPLKRESFWT 172