BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040518
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...   181   8e-44
emb|CBI24516.3| unnamed protein product [Vitis vinifera]              181   8e-44
ref|XP_002518061.1| pentatricopeptide repeat-containing protein,...   136   2e-30
gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indi...   129   5e-28
gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sati...   128   6e-28

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein At5g62370-like
            [Vitis vinifera]
          Length = 1101

 Score =  181 bits (459), Expect = 8e-44
 Identities = 99/199 (49%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
 Frame = -3

Query: 586  FLPDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGER 407
            F+P+ VLYT LI+QF++KGE+ FAF L+DLM R+QI+ D+IT I L+S V      V  R
Sbjct: 685  FVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVRRR 744

Query: 406  W-HKKLITGQ--EMLFQLLSQTAVVPGVRGCSMWFSTRRKLILFALNLVKK-EAASFMPD 239
            W H K  + +  E+L  LL Q+ V+P     S    + RK+  FALNL++K + +SFMP+
Sbjct: 745  WYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPN 804

Query: 238  VYLYNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAIYN 59
            +YLYN +ISG+C  N ++ AYN+  LM+ +GV PN VTFT LI+GH R  EID A+ ++N
Sbjct: 805  LYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFN 864

Query: 58   KINADGLVPDKTMYHTLIK 2
            K+NADGL PD   Y+ LIK
Sbjct: 865  KMNADGLAPDGITYNALIK 883



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 6/198 (3%)
 Frame = -3

Query: 580  PDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGERWH 401
            P +  Y  LI    ++  +  A  L+DLM+ + I PDL TY+ ++   C+         H
Sbjct: 512  PLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCN---------H 562

Query: 400  KKLITGQEMLFQ-----LLSQTAVVPGVRGCSMWFSTRRKLILFALNLVKKEA-ASFMPD 239
              L +   +L Q     L    A+   + GC     +RRK IL A N+ K    A   PD
Sbjct: 563  GDLASAFGLLDQMNERGLKPSVAIYDSIIGCL----SRRKRILEAENVFKMMLEAGVDPD 618

Query: 238  VYLYNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAIYN 59
              +Y  MISGY        A      M   G  P+  ++T +I G ++ N ID+  +  +
Sbjct: 619  AIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLS 678

Query: 58   KINADGLVPDKTMYHTLI 5
             +  DG VP+  +Y +LI
Sbjct: 679  DMLKDGFVPNTVLYTSLI 696



 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
 Frame = -3

Query: 583  LPDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGERW 404
            +PD+  Y  ++ +    G++  AF LLD M    +KP +  Y +++  +           
Sbjct: 546  VPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLS---------- 595

Query: 403  HKKLITGQEMLFQLLSQTAVVP-GVRGCSM--WFSTRRKLILFALNLVKKEAASFMPDVY 233
             +K I   E +F+++ +  V P  +   +M   +S  R+ I       K     F P  +
Sbjct: 596  RRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSH 655

Query: 232  LYNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAIYNKI 53
             Y  +ISG    N ++   +Y++ M +DG  PN V +T+LI+  +R  E++ A  + + +
Sbjct: 656  SYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLM 715

Query: 52   NADGLVPD 29
            + + +  D
Sbjct: 716  DRNQIECD 723


>emb|CBI24516.3| unnamed protein product [Vitis vinifera]
          Length = 970

 Score =  181 bits (459), Expect = 8e-44
 Identities = 99/199 (49%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
 Frame = -3

Query: 586  FLPDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGER 407
            F+P+ VLYT LI+QF++KGE+ FAF L+DLM R+QI+ D+IT I L+S V      V  R
Sbjct: 565  FVPNTVLYTSLINQFLRKGELEFAFRLVDLMDRNQIECDMITCIALVSGVSRNITPVRRR 624

Query: 406  W-HKKLITGQ--EMLFQLLSQTAVVPGVRGCSMWFSTRRKLILFALNLVKK-EAASFMPD 239
            W H K  + +  E+L  LL Q+ V+P     S    + RK+  FALNL++K + +SFMP+
Sbjct: 625  WYHVKSGSARVREILLHLLHQSFVIPRENNLSFPRGSPRKIKYFALNLMQKIKGSSFMPN 684

Query: 238  VYLYNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAIYN 59
            +YLYN +ISG+C  N ++ AYN+  LM+ +GV PN VTFT LI+GH R  EID A+ ++N
Sbjct: 685  LYLYNGIISGFCRANMIQDAYNHFELMQTEGVCPNQVTFTILINGHTRFGEIDHAIGLFN 744

Query: 58   KINADGLVPDKTMYHTLIK 2
            K+NADGL PD   Y+ LIK
Sbjct: 745  KMNADGLAPDGITYNALIK 763



 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 6/198 (3%)
 Frame = -3

Query: 580 PDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGERWH 401
           P +  Y  LI    ++  +  A  L+DLM+ + I PDL TY+ ++   C+         H
Sbjct: 392 PLLSTYNSLIKCLFQERLVEDAKSLIDLMQENGIVPDLATYLIMVHEHCN---------H 442

Query: 400 KKLITGQEMLFQ-----LLSQTAVVPGVRGCSMWFSTRRKLILFALNLVKKEA-ASFMPD 239
             L +   +L Q     L    A+   + GC     +RRK IL A N+ K    A   PD
Sbjct: 443 GDLASAFGLLDQMNERGLKPSVAIYDSIIGCL----SRRKRILEAENVFKMMLEAGVDPD 498

Query: 238 VYLYNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAIYN 59
             +Y  MISGY        A      M   G  P+  ++T +I G ++ N ID+  +  +
Sbjct: 499 AIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSHSYTAVISGLVKENMIDKGCSYLS 558

Query: 58  KINADGLVPDKTMYHTLI 5
            +  DG VP+  +Y +LI
Sbjct: 559 DMLKDGFVPNTVLYTSLI 576



 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
 Frame = -3

Query: 583 LPDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGERW 404
           +PD+  Y  ++ +    G++  AF LLD M    +KP +  Y +++  +           
Sbjct: 426 VPDLATYLIMVHEHCNHGDLASAFGLLDQMNERGLKPSVAIYDSIIGCLS---------- 475

Query: 403 HKKLITGQEMLFQLLSQTAVVP-GVRGCSM--WFSTRRKLILFALNLVKKEAASFMPDVY 233
            +K I   E +F+++ +  V P  +   +M   +S  R+ I       K     F P  +
Sbjct: 476 RRKRILEAENVFKMMLEAGVDPDAIIYVTMISGYSKNRRAIEARQLFDKMIEHGFQPSSH 535

Query: 232 LYNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAIYNKI 53
            Y  +ISG    N ++   +Y++ M +DG  PN V +T+LI+  +R  E++ A  + + +
Sbjct: 536 SYTAVISGLVKENMIDKGCSYLSDMLKDGFVPNTVLYTSLINQFLRKGELEFAFRLVDLM 595

Query: 52  NADGLVPD 29
           + + +  D
Sbjct: 596 DRNQIECD 603


>ref|XP_002518061.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542657|gb|EEF44194.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 403

 Score =  136 bits (343), Expect = 2e-30
 Identities = 78/201 (38%), Positives = 115/201 (57%), Gaps = 6/201 (2%)
 Frame = -3

Query: 586 FLPDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGER 407
           F+P+ V+Y  LI  F++KG + FAF L DLM RS I+ DL+ YI L+   C     V ++
Sbjct: 86  FVPNAVIYASLICHFLRKGHLEFAFRLFDLMDRSLIEIDLVMYIALVIGFCRNINGVKQK 145

Query: 406 WHKKLITG-----QEMLFQLLSQTAVVPGVRGCSMWFSTRRKLILFALNLVKK-EAASFM 245
             +  +TG     +E L QLL Q   +P         ++   +  FA  L+ K +   FM
Sbjct: 146 LCQ--VTGASERMRERLLQLLCQGNFLPKKNILRFSANSPEAMKFFAFKLMYKIKGTRFM 203

Query: 244 PDVYLYNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAI 65
           P++YLYN +I+G+CW + ++ AY     M+ +G+ PN VTFT LI  H R  EID A+ +
Sbjct: 204 PNLYLYNGIIAGFCWADRIKDAYIQFEKMQSEGLCPNEVTFTILIGAHCRAGEIDHAIEL 263

Query: 64  YNKINADGLVPDKTMYHTLIK 2
           +N +NA+   PDK  Y TL+K
Sbjct: 264 FNLMNANAYSPDKVTYSTLLK 284


>gb|EEC66478.1| hypothetical protein OsI_32564 [Oryza sativa Indica Group]
          Length = 481

 Score =  129 bits (323), Expect = 5e-28
 Identities = 71/196 (36%), Positives = 117/196 (59%), Gaps = 3/196 (1%)
 Frame = -3

Query: 580 PDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGER-- 407
           P  V+YT LI+QF +KG++    +L+ LM ++ + PDLITY  L++ +C      G R  
Sbjct: 158 PQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVAGICRNIARRGMRPS 217

Query: 406 WHKKLITGQEMLFQLLSQTAVVPGVRGCSMWFSTRRKLILFALNLVKK-EAASFMPDVYL 230
             KKL   + MLF++L Q       +       T  ++I  A  +++  E    +PD+++
Sbjct: 218 LDKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTE-EMIQVAQGIIQDLEENGMVPDLHI 276

Query: 229 YNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAIYNKIN 50
           YN MI+G C  N+M+ AY+ +++M + G+ PN VT+T L++  IRL +I+ A+ ++N +N
Sbjct: 277 YNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLN 336

Query: 49  ADGLVPDKTMYHTLIK 2
           +DG V DK  Y+T IK
Sbjct: 337 SDGCVFDKITYNTFIK 352


>gb|AAL34928.1|AC079037_1 Putative PPR-repeat protein [Oryza sativa] gi|31429883|gb|AAP51872.1|
            hypothetical protein LOC_Os10g02650 [Oryza sativa
            Japonica Group]
          Length = 949

 Score =  128 bits (322), Expect = 6e-28
 Identities = 71/196 (36%), Positives = 117/196 (59%), Gaps = 3/196 (1%)
 Frame = -3

Query: 580  PDIVLYTCLISQFMKKGEITFAFELLDLMRRSQIKPDLITYITLLSAVCSKTMFVGER-- 407
            P  V+YT LI+QF +KG++    +L+ LM ++ + PDLITY  L++ +C      G R  
Sbjct: 606  PQTVIYTMLINQFFRKGDVRLGLDLVVLMMKTNVAPDLITYGALVTGICRNIARRGMRPS 665

Query: 406  WHKKLITGQEMLFQLLSQTAVVPGVRGCSMWFSTRRKLILFALNLVKK-EAASFMPDVYL 230
              KKL   + MLF++L Q       +       T  ++I  A  +++  E    +PD+++
Sbjct: 666  LAKKLKEARYMLFRMLPQIIDTRNGKQKDNQICTE-EMIQVAQGIIQDLEENGMVPDLHI 724

Query: 229  YNCMISGYCWINEMEVAYNYVALMKRDGVHPNLVTFTTLIDGHIRLNEIDRAVAIYNKIN 50
            YN MI+G C  N+M+ AY+ +++M + G+ PN VT+T L++  IRL +I+ A+ ++N +N
Sbjct: 725  YNGMINGLCRANKMDDAYSLLSVMDQTGILPNHVTYTILMNNQIRLGDINHAIQLFNSLN 784

Query: 49   ADGLVPDKTMYHTLIK 2
            +DG V DK  Y+T IK
Sbjct: 785  SDGCVFDKITYNTFIK 800