BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040502
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]        192   6e-47
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   191   8e-47
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   190   2e-46
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   188   8e-46
ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   183   3e-44

>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 846

 Score =  192 bits (487), Expect = 6e-47
 Identities = 101/219 (46%), Positives = 148/219 (67%), Gaps = 6/219 (2%)
 Frame = +2

Query: 2    GRGTSTHDGVAIAYATLQYLLEQKRCMILFVTHYPKIVELKTQFPASVGAYHVSYLTSKE 181
            GRGTSTHDGVAIA+ATLQYLLE K+CM+LFVTHYP+IV +K +FP SVG YHVSYLTS+ 
Sbjct: 634  GRGTSTHDGVAIAFATLQYLLEHKKCMVLFVTHYPEIVSVKNEFPGSVGPYHVSYLTSQG 693

Query: 182  DPSTNITNDQRVDNMNYEDVLYLYRLVPGISKSSFGFKVAQLAELPPSCISQAVSMAAKL 361
            D + +  ++++++ +N ED+ YLY+L PG+++ SFGFKVAQLA+LP +CI +A+ +A +L
Sbjct: 694  DVTGDCRSNEKMNYINSEDITYLYKLAPGVAERSFGFKVAQLAQLPVACIQRAIVIAGRL 753

Query: 362  EVAVSN-RRKSRLACIYS----KEPFSSDNKAEHSPKKFMKLNGD-TCAEETEDLKELCT 523
            E AV N   +SR+   YS    ++   S    +   + ++   G   C + + +L     
Sbjct: 754  EAAVCNYTEQSRIRRSYSINYRQDGCKSSEPVDDVLEPYLSSAGSVNCIDNSSEL----- 808

Query: 524  AYKEIFLNIKLATSVDDDLEKSFQLLNHARRLALELTNR 640
             Y+E+FLNI  A   ++  ++ FQ L  A+ LA +L +R
Sbjct: 809  -YRELFLNINFALLEENGGDRRFQFLMQAKSLAAQLISR 846


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
            predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  191 bits (486), Expect = 8e-47
 Identities = 112/210 (53%), Positives = 139/210 (66%), Gaps = 1/210 (0%)
 Frame = +2

Query: 2    GRGTSTHDGVAIAYATLQYLLEQKRCMILFVTHYPKIVELKTQFPASVGAYHVSYLTS-K 178
            GRGTST+DG AIAYATL +LL+QKRCM+LFVTHYPKIVE+KT+FP SVGAYHVSYLTS K
Sbjct: 897  GRGTSTYDGEAIAYATLYHLLDQKRCMVLFVTHYPKIVEIKTEFPGSVGAYHVSYLTSEK 956

Query: 179  EDPSTNITNDQRVDNMNYEDVLYLYRLVPGISKSSFGFKVAQLAELPPSCISQAVSMAAK 358
             + +   T D        EDV YLY+LVPG+S+ SFGFKVAQLAELPPSCI +A  MAA+
Sbjct: 957  SEGAIESTCDT-------EDVTYLYKLVPGVSEKSFGFKVAQLAELPPSCIRRATIMAAR 1009

Query: 359  LEVAVSNRRKSRLACIYSKEPFSSDNKAEHSPKKFMKLNGDTCAEETEDLKELCTAYKEI 538
            LE  +S+R  +    +    P     +A+ +      L  D   E++ED      AY+E 
Sbjct: 1010 LEAVLSSRLGNEQ--LLETLPVQQQEEAQEN-----MLRSDVRIEKSED---STVAYREF 1059

Query: 539  FLNIKLATSVDDDLEKSFQLLNHARRLALE 628
            F N+K A   DDD+ +S Q L  AR +A E
Sbjct: 1060 FSNLKSA-MFDDDVARSSQFLEKARSIAKE 1088


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  190 bits (482), Expect = 2e-46
 Identities = 108/217 (49%), Positives = 140/217 (64%), Gaps = 7/217 (3%)
 Frame = +2

Query: 2    GRGTSTHDGVAIAYATLQYLLEQKRCMILFVTHYPKIVELKTQFPASVGAYHVSYLTSK- 178
            GRGTSTHDGVAIAYATL YLLE KRCM+LFVTHYPKIV++K +FP SVGAYHVSY+ S+ 
Sbjct: 906  GRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYMMSQR 965

Query: 179  ------EDPSTNITNDQRVDNMNYEDVLYLYRLVPGISKSSFGFKVAQLAELPPSCISQA 340
                  +   T+  +D+    M++EDV YLY+LVPG+S+ SFGFKVAQLA+LP SCI +A
Sbjct: 966  AMDMDTDTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRA 1025

Query: 341  VSMAAKLEVAVSNRRKSRLACIYSKEPFSSDNKAEHSPKKFMKLNGDTCAEETEDLKELC 520
              MAA+LE  + +R K+           SS  K     ++ + +       E   L+E  
Sbjct: 1026 NVMAAELEAMIVSRVKN-----------SSAQKTLQGSQQSISIQSGCSRAEQIGLEE-- 1072

Query: 521  TAYKEIFLNIKLATSVDDDLEKSFQLLNHARRLALEL 631
             A +E FL++K A   + D E+S Q L HAR +A EL
Sbjct: 1073 DACREFFLDLKSALG-NADPERSLQFLKHARSIAKEL 1108


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  188 bits (477), Expect = 8e-46
 Identities = 110/213 (51%), Positives = 141/213 (66%)
 Frame = +2

Query: 2    GRGTSTHDGVAIAYATLQYLLEQKRCMILFVTHYPKIVELKTQFPASVGAYHVSYLTSKE 181
            GRGTSTHDG AIAYATL +LLEQKRCM+LFVTHYPKI  ++T F  SVGAYHVSYL +++
Sbjct: 897  GRGTSTHDGEAIAYATLCHLLEQKRCMVLFVTHYPKIANIRTGFLNSVGAYHVSYLMAEK 956

Query: 182  DPSTNITNDQRVDNMNYEDVLYLYRLVPGISKSSFGFKVAQLAELPPSCISQAVSMAAKL 361
            +   N   D + DN   EDV YLY+LVPG+S+ SFGFKVAQLA+LP SCI +A  MAA+L
Sbjct: 957  N---NDATDSKFDN---EDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCIERATVMAARL 1010

Query: 362  EVAVSNRRKSRLACIYSKEPFSSDNKAEHSPKKFMKLNGDTCAEETEDLKELCTAYKEIF 541
            E A+S R ++RL      +    D + +   +K  +  G+   +  E+ +EL   Y++ F
Sbjct: 1011 EEAISCRIRNRLDKSQLLKALQID-QLQEIQEKIPESPGNFHDKRIENYEELNNTYEKFF 1069

Query: 542  LNIKLATSVDDDLEKSFQLLNHARRLALELTNR 640
            LN K A   DD   KSFQ L +AR +A  L  R
Sbjct: 1070 LNFKSALLGDD--AKSFQYLENARSIARALIKR 1100


>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  183 bits (464), Expect = 3e-44
 Identities = 110/213 (51%), Positives = 134/213 (62%)
 Frame = +2

Query: 2    GRGTSTHDGVAIAYATLQYLLEQKRCMILFVTHYPKIVELKTQFPASVGAYHVSYLTSKE 181
            GRGTSTHDG+AIA+ATL YLL+QKR M+LFVTHYPKI  L T+FP SV AYHVS+L S  
Sbjct: 873  GRGTSTHDGMAIAHATLHYLLKQKRSMVLFVTHYPKIASLATEFPGSVAAYHVSHLIS-H 931

Query: 182  DPSTNITNDQRVDNMNYEDVLYLYRLVPGISKSSFGFKVAQLAELPPSCISQAVSMAAKL 361
            D S N   D         DV YLY+LVPG+S+ SFGFKVAQLA+LP  CIS+A+ MA+KL
Sbjct: 932  DASKNSNLD--------HDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKL 983

Query: 362  EVAVSNRRKSRLACIYSKEPFSSDNKAEHSPKKFMKLNGDTCAEETEDLKELCTAYKEIF 541
            E  V++R   R     +KE            ++ M  + D         KE   AYK+ +
Sbjct: 984  EALVNSRIHGR----STKELLLDTLVIGQEKEQLMAQSLD------RPHKEFDMAYKDFY 1033

Query: 542  LNIKLATSVDDDLEKSFQLLNHARRLALELTNR 640
            LN+K AT  DDD  KSF LL HAR +A +L  R
Sbjct: 1034 LNLKAATE-DDDWAKSFHLLEHARSIAKKLIGR 1065