BLASTX nr result

ID: Cnidium21_contig00040487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040487
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39605.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]   170   1e-40
ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37

>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/124 (66%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1   LLSNIYAKAGRWEDASRVRKLMKERGVKTNGGSSIIDLG-GTCHEFKVGDSTHPQSEEIY 177
           LLSNIYAKAGRWE+   VRKLMKERG+KT  G+SIIDLG G  H+F +GD +HPQ ++IY
Sbjct: 459 LLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIY 518

Query: 178 LMLEKIIKRLQSEGYLANTSQVLFDIDEADKENAVWHHSERLAIAYGLINATPGAAIRVM 357
            ML+K+ +RLQ EGY  + SQVLFDIDE +KE AVW HSE+LAI +GLIN +PG  IR++
Sbjct: 519 QMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIV 578

Query: 358 KNLR 369
           KNLR
Sbjct: 579 KNLR 582


>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/124 (66%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1   LLSNIYAKAGRWEDASRVRKLMKERGVKTNGGSSIIDLG-GTCHEFKVGDSTHPQSEEIY 177
           LLSNIYAKAGRWE+   VRKLMKERG+KT  G+SIIDLG G  H+F +GD +HPQ ++IY
Sbjct: 507 LLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIY 566

Query: 178 LMLEKIIKRLQSEGYLANTSQVLFDIDEADKENAVWHHSERLAIAYGLINATPGAAIRVM 357
            ML+K+ +RLQ EGY  + SQVLFDIDE +KE AVW HSE+LAI +GLIN +PG  IR++
Sbjct: 567 QMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIV 626

Query: 358 KNLR 369
           KNLR
Sbjct: 627 KNLR 630


>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  170 bits (430), Expect = 1e-40
 Identities = 82/124 (66%), Positives = 100/124 (80%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1   LLSNIYAKAGRWEDASRVRKLMKERGVKTNGGSSIIDLG-GTCHEFKVGDSTHPQSEEIY 177
           LLSNIYAKAGRWE+   VRKLMKERG+KT  G+SIIDLG G  H+F +GD +HPQ ++IY
Sbjct: 508 LLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIY 567

Query: 178 LMLEKIIKRLQSEGYLANTSQVLFDIDEADKENAVWHHSERLAIAYGLINATPGAAIRVM 357
            ML+K+ +RLQ EGY  + SQVLFDIDE +KE AVW HSE+LAI +GLIN +PG  IR++
Sbjct: 568 QMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGTTIRIV 627

Query: 358 KNLR 369
           KNLR
Sbjct: 628 KNLR 631


>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  167 bits (422), Expect = 1e-39
 Identities = 80/123 (65%), Positives = 99/123 (80%)
 Frame = +1

Query: 1   LLSNIYAKAGRWEDASRVRKLMKERGVKTNGGSSIIDLGGTCHEFKVGDSTHPQSEEIYL 180
           LLSNIYA+AGRW+D + VRKLMKERGVKT+ G S+ID  G  HEFK+GD +HPQ + IYL
Sbjct: 501 LLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYL 560

Query: 181 MLEKIIKRLQSEGYLANTSQVLFDIDEADKENAVWHHSERLAIAYGLINATPGAAIRVMK 360
           ML+ +IKRL+ EG+  NTSQVLFDI+E +KE  + +HSE+LAIA+GLIN  PG  I V+K
Sbjct: 561 MLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGTTIHVVK 620

Query: 361 NLR 369
           NLR
Sbjct: 621 NLR 623


>ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  159 bits (402), Expect = 2e-37
 Identities = 78/123 (63%), Positives = 98/123 (79%)
 Frame = +1

Query: 1   LLSNIYAKAGRWEDASRVRKLMKERGVKTNGGSSIIDLGGTCHEFKVGDSTHPQSEEIYL 180
           LLSNIYAK GR++D S++RKLMK+RG+KT  G SI+DL GT HEFK+GD +HPQ +EIY 
Sbjct: 502 LLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYR 561

Query: 181 MLEKIIKRLQSEGYLANTSQVLFDIDEADKENAVWHHSERLAIAYGLINATPGAAIRVMK 360
            L+ I +RLQ  G+  +TSQVLFDIDE +KE AV +HSE+LAIA+GLIN  PG  I ++K
Sbjct: 562 KLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKRIHIVK 621

Query: 361 NLR 369
           NLR
Sbjct: 622 NLR 624


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