BLASTX nr result
ID: Cnidium21_contig00040471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00040471
(621 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001234641.1| MLH1 protein [Solanum lycopersicum] gi|12623... 279 3e-73
ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|2... 276 3e-72
ref|XP_002521781.1| DNA mismatch repair protein mlh1, putative [... 266 3e-69
ref|XP_003522597.1| PREDICTED: DNA mismatch repair protein Mlh1-... 265 7e-69
ref|XP_004168484.1| PREDICTED: DNA mismatch repair protein Mlh1-... 250 1e-64
>ref|NP_001234641.1| MLH1 protein [Solanum lycopersicum] gi|126238204|gb|ABO07413.1|
MLH1 [Solanum lycopersicum]
Length = 730
Score = 279 bits (713), Expect = 3e-73
Identities = 137/207 (66%), Positives = 169/207 (81%)
Frame = -1
Query: 621 LVECGALKRAVEIVYSATLPKASKPFIYMSIVLRSEHVDVNIHPTKREVSLLNQEVIIEK 442
L++CGALKRA+EIVY+ATLPKASKPFIYMSI+L EHVDVNIHPTKREVS LNQE +IEK
Sbjct: 278 LIDCGALKRAIEIVYTATLPKASKPFIYMSIILPPEHVDVNIHPTKREVSFLNQEFVIEK 337
Query: 441 IQAVVESKLRNSNEERTFQEQTVDPSPSSPMTASQASPNVPSTSASGFKVPKVPHKIVRT 262
IQ+VV SKLR+SNE RTFQEQT+D S S PM + +S SG K KVPHK+VRT
Sbjct: 338 IQSVVGSKLRSSNESRTFQEQTMDLSSSGPM----GQDSTKESSPSGIKSQKVPHKMVRT 393
Query: 261 NSQDPAGRLHAYMHVKSPVHVQRNSALASVRSLVRQRRNPRETADLTSVQQLLDVVNHRC 82
++ DP+GRLHAYM +K P + +R +SVRS +RQRRNP +TADLTS+Q+L++ +++ C
Sbjct: 394 DTLDPSGRLHAYMQMKPPGNSERGPCFSSVRSSIRQRRNPSDTADLTSIQELVNEIDNDC 453
Query: 81 HSGLLDIVKHCTYIGMADDVFALLQHN 1
H GLLDIV++CTY GMAD++FALLQHN
Sbjct: 454 HPGLLDIVRNCTYTGMADEIFALLQHN 480
>ref|XP_002325965.1| predicted protein [Populus trichocarpa] gi|222862840|gb|EEF00347.1|
predicted protein [Populus trichocarpa]
Length = 747
Score = 276 bits (705), Expect = 3e-72
Identities = 142/207 (68%), Positives = 173/207 (83%), Gaps = 1/207 (0%)
Frame = -1
Query: 621 LVECGALKRAVEIVYSATLPKASKPFIYMSIVLRSEHVDVNIHPTKREVSLLNQEVIIEK 442
LVEC ALKRA+EIVY+ATLPKASKPFIYMSIVL EHVDVN+HPTKREVSLLNQE II
Sbjct: 295 LVECTALKRAIEIVYAATLPKASKPFIYMSIVLPPEHVDVNVHPTKREVSLLNQEFIINT 354
Query: 441 IQAVVESKLRNSNEERTFQEQTVDPSPSSPMTASQASPNVPSTSASGFKVPKVP-HKIVR 265
IQ+ VESKLRNSNE RTFQEQT+D SPS ++A + S PS S G K KVP +K+VR
Sbjct: 355 IQSAVESKLRNSNEARTFQEQTLDSSPSVTLSAKKDSNVNPSPSPYGSKSQKVPVNKMVR 414
Query: 264 TNSQDPAGRLHAYMHVKSPVHVQRNSALASVRSLVRQRRNPRETADLTSVQQLLDVVNHR 85
T++ DPAGRLHAY+ + +++ NS+LA+VRS VRQRRNP+E+AD++SVQ+L++ ++
Sbjct: 415 TDASDPAGRLHAYLQARPVDNLEGNSSLAAVRSSVRQRRNPKESADISSVQELVNDIDGN 474
Query: 84 CHSGLLDIVKHCTYIGMADDVFALLQH 4
CHSGLLDIV++CTYIGMADDVFALLQ+
Sbjct: 475 CHSGLLDIVRNCTYIGMADDVFALLQY 501
>ref|XP_002521781.1| DNA mismatch repair protein mlh1, putative [Ricinus communis]
gi|223538994|gb|EEF40591.1| DNA mismatch repair protein
mlh1, putative [Ricinus communis]
Length = 735
Score = 266 bits (679), Expect = 3e-69
Identities = 138/208 (66%), Positives = 166/208 (79%), Gaps = 1/208 (0%)
Frame = -1
Query: 621 LVECGALKRAVEIVYSATLPKASKPFIYMSIVLRSEHVDVNIHPTKREVSLLNQEVIIEK 442
LVEC LKRA+EIVY+ATLPKASKPF+YMS+VL EHVDVN+HPTKREVSLLNQE I+EK
Sbjct: 281 LVECTTLKRALEIVYTATLPKASKPFVYMSVVLPPEHVDVNVHPTKREVSLLNQETIVEK 340
Query: 441 IQAVVESKLRNSNEERTFQEQTVDPSPSSPMTASQASPNVPSTSASGFKVPKVP-HKIVR 265
IQ VESKLR+SNE ++FQEQT+DPSPS P+ + P S++G K KVP +K++R
Sbjct: 341 IQLAVESKLRSSNEAKSFQEQTIDPSPSCPLGTGKDLKVDP--SSNGSKAQKVPVNKMIR 398
Query: 264 TNSQDPAGRLHAYMHVKSPVHVQRNSALASVRSLVRQRRNPRETADLTSVQQLLDVVNHR 85
T+ DPAGRLHAY K SAL++VRS VRQRRNP+ETADLTS+Q+L+D ++
Sbjct: 399 TDVLDPAGRLHAYFEAKP-------SALSAVRSSVRQRRNPKETADLTSIQELIDDIDCH 451
Query: 84 CHSGLLDIVKHCTYIGMADDVFALLQHN 1
CHSGLLDIV+ CTYIGMADD FALLQ+N
Sbjct: 452 CHSGLLDIVRQCTYIGMADDSFALLQYN 479
>ref|XP_003522597.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Glycine max]
Length = 727
Score = 265 bits (676), Expect = 7e-69
Identities = 135/208 (64%), Positives = 170/208 (81%), Gaps = 1/208 (0%)
Frame = -1
Query: 621 LVECGALKRAVEIVYSATLPKASKPFIYMSIVLRSEHVDVNIHPTKREVSLLNQEVIIEK 442
LVEC ALKRA+EIVY+ATLPKASKPFIY+SIVL E++DVN+HPTKREVSLLNQEVIIEK
Sbjct: 276 LVECSALKRAIEIVYAATLPKASKPFIYISIVLPPENIDVNVHPTKREVSLLNQEVIIEK 335
Query: 441 IQAVVESKLRNSNEERTFQEQTVDPSPSSPMTASQASPNVPSTSASGFKVPKVP-HKIVR 265
IQ+VVES LR+SNE RTFQEQ+ S SSP + N+ S +G ++ KVP HK+VR
Sbjct: 336 IQSVVESTLRSSNEARTFQEQSAGQS-SSPRINTSKEVNL-SPMPTGSRLLKVPVHKLVR 393
Query: 264 TNSQDPAGRLHAYMHVKSPVHVQRNSALASVRSLVRQRRNPRETADLTSVQQLLDVVNHR 85
T+S DPAGRLHAY + S H++++++L ++RS VRQRRNP+++ +LTSVQ+LLD +N
Sbjct: 394 TDSLDPAGRLHAYTQIMSDRHLEKSASLNAIRSSVRQRRNPKDSLELTSVQELLDKINSN 453
Query: 84 CHSGLLDIVKHCTYIGMADDVFALLQHN 1
C G+ DI++HCTY+GMADDVFALLQHN
Sbjct: 454 CDPGMTDIIRHCTYVGMADDVFALLQHN 481
>ref|XP_004168484.1| PREDICTED: DNA mismatch repair protein Mlh1-like [Cucumis sativus]
Length = 738
Score = 250 bits (639), Expect = 1e-64
Identities = 130/207 (62%), Positives = 164/207 (79%), Gaps = 1/207 (0%)
Frame = -1
Query: 621 LVECGALKRAVEIVYSATLPKASKPFIYMSIVLRSEHVDVNIHPTKREVSLLNQEVIIEK 442
+VEC ALKRA+EIVY+ATLPKASKP+IYMSI+L EHVDVN+HPTK+EVSLLNQEVIIE+
Sbjct: 291 MVECSALKRAIEIVYAATLPKASKPYIYMSIILPPEHVDVNVHPTKKEVSLLNQEVIIER 350
Query: 441 IQAVVESKLRNSNEERTFQEQTVDPSPSSPMTASQASPNVPSTSASGFKVPKVP-HKIVR 265
IQ+ VESKLR+SN+ + FQEQ V+ S + M S + + ++S G K KVP HK+VR
Sbjct: 351 IQSAVESKLRSSNDTKAFQEQDVESSEAYQMLLS--NDDSQNSSKFGSKSQKVPVHKMVR 408
Query: 264 TNSQDPAGRLHAYMHVKSPVHVQRNSALASVRSLVRQRRNPRETADLTSVQQLLDVVNHR 85
+S DPAGRLHAY+ +K P + S L +VRS VRQRRNP+E+A+LTS+Q L+ ++
Sbjct: 409 ADSTDPAGRLHAYVQMKRPGLPE--STLTAVRSFVRQRRNPKESANLTSIQDLVADIDKN 466
Query: 84 CHSGLLDIVKHCTYIGMADDVFALLQH 4
CH+GLL+ V+HC YIGMADDVFALLQH
Sbjct: 467 CHAGLLNTVRHCVYIGMADDVFALLQH 493