BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040421
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   198   3e-49
ref|XP_002522334.1| pentatricopeptide repeat-containing protein,...   197   6e-49
ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containi...   188   4e-46
ref|XP_002869013.1| pentatricopeptide repeat-containing protein ...   187   8e-46

>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  202 bits (514), Expect = 2e-50
 Identities = 94/153 (61%), Positives = 123/153 (80%)
 Frame = +3

Query: 3   RLLDLYCKSGCIADAHKLFDEMSQRDVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFT 182
           RLL++Y K   + D+ KLFDEM +RD+CSWNI++ GYAK G L  A+ LFD+MP++D F+
Sbjct: 110 RLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFS 169

Query: 183 WNAMISGYVRYKQPGEGLKLFRVMEKNGILGSTKFVVSSALSACSATRCLRAGKEIHGHI 362
           W AMISGYVR+ +P E L+LFR+M+++    S KF VSSAL+A +A  CLR GKEIHG+I
Sbjct: 170 WTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYI 229

Query: 363 VRTGLDFDEVVCSSLSDMYGKCGSMDDARHLFD 461
           +RTGLD DEVV S+LSDMYGKCGS+++ARH+FD
Sbjct: 230 MRTGLDSDEVVWSALSDMYGKCGSIEEARHIFD 262



 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/127 (35%), Positives = 68/127 (53%)
 Frame = +3

Query: 78  DVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFTWNAMISGYVRYKQPGEGLKLFRVME 257
           D   W+ +   Y K G++  AR +FD+M  +D  TW AMI  Y +  +  EG  LF  + 
Sbjct: 237 DEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLL 296

Query: 258 KNGILGSTKFVVSSALSACSATRCLRAGKEIHGHIVRTGLDFDEVVCSSLSDMYGKCGSM 437
           ++GI  + +F  S  L+AC+       GK++HG++ R G D      S+L  MY KCG+M
Sbjct: 297 RSGIRPN-EFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNM 355

Query: 438 DDARHLF 458
             A  +F
Sbjct: 356 VSAERVF 362



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
 Frame = +3

Query: 99  MVYGYAKAGNLGGARGLFDEMPQKDYFTWNAMISGYVRYKQPGEGLKLFRVMEKNGILGS 278
           +V+ Y+K GN+  A  +F E PQ D F+W ++I+GY +  QP E ++ F ++ K+G    
Sbjct: 345 LVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSG-TQP 403

Query: 279 TKFVVSSALSACSATRCLRAGKE-IHGHIVRTGLDFDEVVCSSLSDMYGKCGSMDDARHL 455
                   LSAC+    +  G +  H    + GL       + + D+  + G  D+A ++
Sbjct: 404 DHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENI 463


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  198 bits (504), Expect = 3e-49
 Identities = 94/153 (61%), Positives = 117/153 (76%)
 Frame = +3

Query: 3   RLLDLYCKSGCIADAHKLFDEMSQRDVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFT 182
           RLLD+Y K G + DA  LFDEM  RD+CSWN M+ GYAK G L  AR LFDEMPQ+D F+
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFS 186

Query: 183 WNAMISGYVRYKQPGEGLKLFRVMEKNGILGSTKFVVSSALSACSATRCLRAGKEIHGHI 362
           WNA ISGYV + QP E L+LFRVM+++    S KF +SSAL+A +A  CLR GKEIHG++
Sbjct: 187 WNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYL 246

Query: 363 VRTGLDFDEVVCSSLSDMYGKCGSMDDARHLFD 461
           +RT L+ DEVV S+L D+YGKCGS+D+AR +FD
Sbjct: 247 IRTELNLDEVVWSALLDLYGKCGSLDEARGIFD 279



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/128 (32%), Positives = 68/128 (53%)
 Frame = +3

Query: 78  DVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFTWNAMISGYVRYKQPGEGLKLFRVME 257
           D   W+ ++  Y K G+L  ARG+FD+M  +D  +W  MI       +  EG  LFR + 
Sbjct: 254 DEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLM 313

Query: 258 KNGILGSTKFVVSSALSACSATRCLRAGKEIHGHIVRTGLDFDEVVCSSLSDMYGKCGSM 437
           ++G+    ++  +  L+AC+       GKE+HG+++  G D      S+L  MY KCG+ 
Sbjct: 314 QSGV-RPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNT 372

Query: 438 DDARHLFD 461
             AR +F+
Sbjct: 373 RVARRVFN 380



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
 Frame = +3

Query: 99  MVYGYAKAGNLGGARGLFDEMPQKDYFTWNAMISGYVRYKQPGEGLKLFRVMEKNGILGS 278
           +V+ Y+K GN   AR +F+EM Q D  +W ++I GY +  QP E L  F ++ ++G    
Sbjct: 362 LVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPD 421

Query: 279 TKFVVSSALSACSATRCLRAGKE-IHGHIVRTGLDFDEVVCSSLSDMYGKCGSMDDARHL 455
               V   LSAC+    +  G E  H    + GL       + + D+  + G   +A ++
Sbjct: 422 QVTYV-GVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENI 480

Query: 456 FD 461
            D
Sbjct: 481 ID 482


>ref|XP_002522334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538412|gb|EEF40018.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/153 (61%), Positives = 120/153 (78%)
 Frame = +3

Query: 3   RLLDLYCKSGCIADAHKLFDEMSQRDVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFT 182
           RLLD+Y K   + DA KLF+EM +RD+CSWN+++ G AK G L  AR LFD MP++D F+
Sbjct: 120 RLLDMYAKCNDLVDAQKLFEEMGERDLCSWNVLISGCAKMGLLKEARKLFDTMPERDNFS 179

Query: 183 WNAMISGYVRYKQPGEGLKLFRVMEKNGILGSTKFVVSSALSACSATRCLRAGKEIHGHI 362
           W AMISGYVR+ +P E L+L+R+M+K   L S KF VSS L+A +A  CLR GKEIHG+I
Sbjct: 180 WTAMISGYVRHNRPHEALELYRLMKKCENLTSNKFTVSSVLAAAAAIPCLRIGKEIHGYI 239

Query: 363 VRTGLDFDEVVCSSLSDMYGKCGSMDDARHLFD 461
           +RTGLD DEVV S+LSDMYGKCGS+++ARH+FD
Sbjct: 240 MRTGLDSDEVVWSALSDMYGKCGSIEEARHIFD 272



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 44/127 (34%), Positives = 66/127 (51%)
 Frame = +3

Query: 78  DVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFTWNAMISGYVRYKQPGEGLKLFRVME 257
           D   W+ +   Y K G++  AR +FD+M  +D  TW AMI  Y    +  EG +LF  + 
Sbjct: 247 DEVVWSALSDMYGKCGSIEEARHIFDKMVNRDVVTWTAMIDRYFEDGRREEGFELFAELL 306

Query: 258 KNGILGSTKFVVSSALSACSATRCLRAGKEIHGHIVRTGLDFDEVVCSSLSDMYGKCGSM 437
           ++GI     F  +  L+AC+       GK++HGH+ R   D      S+L  MY KCG+M
Sbjct: 307 RSGI-KPNDFTFAGVLNACADLGVEGIGKQVHGHMTRADFDPFSFAASALVHMYSKCGNM 365

Query: 438 DDARHLF 458
            +A  +F
Sbjct: 366 VNAERVF 372


>ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 621

 Score =  188 bits (477), Expect = 4e-46
 Identities = 89/153 (58%), Positives = 116/153 (75%)
 Frame = +3

Query: 3   RLLDLYCKSGCIADAHKLFDEMSQRDVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFT 182
           R+LD+Y K   + +A +LFDEM++RD+CSWNIM+ GYAKAG L  AR LFD+M ++D F+
Sbjct: 129 RILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFS 188

Query: 183 WNAMISGYVRYKQPGEGLKLFRVMEKNGILGSTKFVVSSALSACSATRCLRAGKEIHGHI 362
           W AM SGYVR+ Q  E L+LFR M+++      KF +SSAL+A +A + L  GKEIHGHI
Sbjct: 189 WTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHI 248

Query: 363 VRTGLDFDEVVCSSLSDMYGKCGSMDDARHLFD 461
           +R GLD D VV S+LSDMYGKCGS+ +ARH+FD
Sbjct: 249 LRIGLDLDGVVWSALSDMYGKCGSIGEARHIFD 281



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/124 (35%), Positives = 70/124 (56%)
 Frame = +3

Query: 90  WNIMVYGYAKAGNLGGARGLFDEMPQKDYFTWNAMISGYVRYKQPGEGLKLFRVMEKNGI 269
           W+ +   Y K G++G AR +FD+   +D  +W AMI  Y +  +  EG  LF  + K+GI
Sbjct: 260 WSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFKEGRREEGFALFSDLLKSGI 319

Query: 270 LGSTKFVVSSALSACSATRCLRAGKEIHGHIVRTGLDFDEVVCSSLSDMYGKCGSMDDAR 449
             + +F  S  L+AC+       GK++HG++ R G D      S+L  MY KCG++ +AR
Sbjct: 320 WPN-EFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNAR 378

Query: 450 HLFD 461
            +F+
Sbjct: 379 RVFN 382



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
 Frame = +3

Query: 99  MVYGYAKAGNLGGARGLFDEMPQKDYFTWNAMISGYVRYKQPGEGLKLFRVMEKNGILGS 278
           +V+ Y K GN+  AR +F+ MP+ D  +W ++ISGY +  QP E L+ F ++ K+G    
Sbjct: 364 LVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSG-TQP 422

Query: 279 TKFVVSSALSACSATRCLRAGKEIHGHI-VRTGLDFDEVVCSSLSDMYGKCGSMDDARHL 455
                   LSAC+    +  G E    I  + GL       + L D+  + G + +A  +
Sbjct: 423 DHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDI 482

Query: 456 FD 461
            D
Sbjct: 483 ID 484


>ref|XP_002869013.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314849|gb|EFH45272.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 693

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/153 (56%), Positives = 115/153 (75%)
 Frame = +3

Query: 3   RLLDLYCKSGCIADAHKLFDEMSQRDVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFT 182
           R+L +Y K G + DA K+FDEM +RDVCSWN+MV GYA+ G L  AR LFDEMP++D ++
Sbjct: 127 RILGMYAKCGSLVDARKVFDEMPERDVCSWNVMVNGYAEVGLLEEARNLFDEMPERDSYS 186

Query: 183 WNAMISGYVRYKQPGEGLKLFRVMEKNGILGSTKFVVSSALSACSATRCLRAGKEIHGHI 362
           W AM++GYV+  QP E L L+ +M++        F VSSA++A +A +C+R GKEIHGHI
Sbjct: 187 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSKPNIFTVSSAVAAAAAIKCIRRGKEIHGHI 246

Query: 363 VRTGLDFDEVVCSSLSDMYGKCGSMDDARHLFD 461
           VR GLD DEV+ SSL DMYGKCG +D+AR++FD
Sbjct: 247 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFD 279



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
 Frame = +3

Query: 78  DVCSWNIMVYGYAKAGNLGGARGLFDEMPQKDYFTWNAMISGYVRYKQPGEGLKLFRVME 257
           D   W+ ++  Y K G +  AR +FD++  KD  +W +MI  Y +  +  EG  LF    
Sbjct: 254 DEVLWSSLMDMYGKCGCIDEARNIFDKIIDKDVVSWTSMIDRYFKSSRWREGFSLF---- 309

Query: 258 KNGILGS----TKFVVSSALSACSATRCLRAGKEIHGHIVRTGLDFDEVVCSSLSDMYGK 425
            + ++GS     ++  S  L+AC+       G+++HG++ R G D      SSL DMY K
Sbjct: 310 -SELIGSCERPNEYTFSGVLNACADLTTEELGRQVHGYMTRVGFDPYSFASSSLIDMYTK 368

Query: 426 CGSMDDARHLFD 461
           CG+++ ARH+ D
Sbjct: 369 CGNIESARHVVD 380