BLASTX nr result

ID: Cnidium21_contig00040380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040380
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78957.1| hypothetical protein VITISV_025691 [Vitis vinifera]   154   3e-35
ref|XP_002272312.1| PREDICTED: histone H2B.2 [Vitis vinifera] gi...   152   1e-34
ref|XP_003539797.1| PREDICTED: histone H2B-alpha-like [Glycine max]   145   1e-32
ref|XP_003539186.1| PREDICTED: histone H2B-like [Glycine max]         139   8e-31
ref|XP_002892444.1| hypothetical protein ARALYDRAFT_470878 [Arab...   138   2e-30

>emb|CAN78957.1| hypothetical protein VITISV_025691 [Vitis vinifera]
          Length = 217

 Score =  154 bits (388), Expect = 3e-35
 Identities = 94/215 (43%), Positives = 129/215 (60%), Gaps = 3/215 (1%)
 Frame = -1

Query: 796 MAPKKKSPKKRMVGAVLKTTTKVIEETVQVSVIQTKQKP---QQRNEQEETPQVPEKGGQ 626
           MAPK+    +  V  V+K T KV++ETV+V+V+ +KQKP   +Q  +  +  + PE+  +
Sbjct: 1   MAPKRSGKTRSKV--VVKATRKVVQETVEVTVLASKQKPPREEQGKKISKKDKAPEELQR 58

Query: 625 KAKGAKNIQIQEVXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXNP 446
           +   A     +E+                     Q                         
Sbjct: 59  EQVSADEEPAKELPTPVTQEEPPKKEEEKKTTTTQEGREEKKRGRRRRXXXTSGRRRK-- 116

Query: 445 SGVEGYKRYVYKVLKQVHPDMGISSKAMTIVNNLMSDMFERFADEAARLTKYTKRMTMSS 266
            G EGYKRYVY+VLKQVHP +G+SSKAMT+++  M+DMFER A+EAA+L+KYT + T+S+
Sbjct: 117 EGGEGYKRYVYRVLKQVHPGLGVSSKAMTVLSGFMNDMFERIAEEAAKLSKYTGKTTLSA 176

Query: 265 REIQGAVKLVLPGELGKHAVAEGAKAVTNYLQYVS 161
           REIQGAVKLVLPGEL KHA+AEG KAV+NY+ Y +
Sbjct: 177 REIQGAVKLVLPGELQKHAMAEGTKAVSNYMDYAA 211


>ref|XP_002272312.1| PREDICTED: histone H2B.2 [Vitis vinifera]
           gi|297734885|emb|CBI17119.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  152 bits (383), Expect = 1e-34
 Identities = 90/215 (41%), Positives = 126/215 (58%), Gaps = 3/215 (1%)
 Frame = -1

Query: 796 MAPKKKSPKKRMVGAVLKTTTKVIEETVQVSVIQTKQKP---QQRNEQEETPQVPEKGGQ 626
           MAPK+    +  V  V+K T KV+++TV+V+V+ +KQKP   +Q  +  +  + PE+  +
Sbjct: 1   MAPKRSGKTRSKV--VVKATRKVVQQTVEVTVLASKQKPPREEQGKKISKKDKAPEELQR 58

Query: 625 KAKGAKNIQIQEVXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXNP 446
           +   A     +E+                     Q                         
Sbjct: 59  EQVSADEEPPKELPTPVTQEEPPKKEEEKKTTTTQEGREEKKRGRRRRRRTSGRRRK--- 115

Query: 445 SGVEGYKRYVYKVLKQVHPDMGISSKAMTIVNNLMSDMFERFADEAARLTKYTKRMTMSS 266
            G EGYKRYVY+VLKQVHP +G+SSKAMT+++  M+DMFER A+EAA+L+KYT + T+S+
Sbjct: 116 EGGEGYKRYVYRVLKQVHPGLGVSSKAMTVLSGFMNDMFERIAEEAAKLSKYTGKTTLSA 175

Query: 265 REIQGAVKLVLPGELGKHAVAEGAKAVTNYLQYVS 161
           REIQGAVKLVLPGEL KHA+AEG KAV+NY+ Y +
Sbjct: 176 REIQGAVKLVLPGELQKHAMAEGTKAVSNYMDYAA 210


>ref|XP_003539797.1| PREDICTED: histone H2B-alpha-like [Glycine max]
          Length = 225

 Score =  145 bits (365), Expect = 1e-32
 Identities = 69/91 (75%), Positives = 80/91 (87%)
 Frame = -1

Query: 439 VEGYKRYVYKVLKQVHPDMGISSKAMTIVNNLMSDMFERFADEAARLTKYTKRMTMSSRE 260
           VEGY+RYVY+VLKQVHP+MGISSK MT++NNLM+DMFER A EA++L  YT  MT+SSRE
Sbjct: 133 VEGYQRYVYRVLKQVHPEMGISSKCMTVLNNLMNDMFERLAFEASKLKDYTGHMTLSSRE 192

Query: 259 IQGAVKLVLPGELGKHAVAEGAKAVTNYLQY 167
           IQGAV+LVLPGELGKHA+AEG KAV NY  Y
Sbjct: 193 IQGAVRLVLPGELGKHAIAEGVKAVNNYTSY 223


>ref|XP_003539186.1| PREDICTED: histone H2B-like [Glycine max]
          Length = 186

 Score =  139 bits (350), Expect = 8e-31
 Identities = 87/208 (41%), Positives = 109/208 (52%), Gaps = 7/208 (3%)
 Frame = -1

Query: 769 KRMVGAVLKTTTKVIEETVQVSV-------IQTKQKPQQRNEQEETPQVPEKGGQKAKGA 611
           KR    V+++T KV+E  VQVSV       I T+ K +Q N   +   V  +  ++ KG 
Sbjct: 4   KRAEKLVVRSTKKVVESIVQVSVKVSPNSDITTENKAEQENNTHQDGGVQNQE-EEQKGV 62

Query: 610 KNIQIQEVXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXXXXXXNPSGVEG 431
            N + +E                                                  +EG
Sbjct: 63  VNEEAKE--------------------------EKNKSKTAKEQNGKEKKRGRKKRNIEG 96

Query: 430 YKRYVYKVLKQVHPDMGISSKAMTIVNNLMSDMFERFADEAARLTKYTKRMTMSSREIQG 251
           Y+RYVY VLKQVHP+MGISSK MT +NNLM+DMFER   E ++LT YT  MT+SSREIQG
Sbjct: 97  YQRYVYGVLKQVHPEMGISSKCMTALNNLMNDMFERLTFEVSKLTDYTGHMTLSSREIQG 156

Query: 250 AVKLVLPGELGKHAVAEGAKAVTNYLQY 167
            V+LVLPGEL KHA+AEG KAV NY  Y
Sbjct: 157 VVRLVLPGELEKHAIAEGVKAVNNYTSY 184


>ref|XP_002892444.1| hypothetical protein ARALYDRAFT_470878 [Arabidopsis lyrata subsp.
           lyrata] gi|297338286|gb|EFH68703.1| hypothetical protein
           ARALYDRAFT_470878 [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  138 bits (347), Expect = 2e-30
 Identities = 66/90 (73%), Positives = 79/90 (87%)
 Frame = -1

Query: 430 YKRYVYKVLKQVHPDMGISSKAMTIVNNLMSDMFERFADEAARLTKYTKRMTMSSREIQG 251
           Y+RYVYKV+KQVHPD+GI+SKAMT+VN  M DMFER A EAARL+ YTKR T+SSREI+ 
Sbjct: 112 YRRYVYKVMKQVHPDLGITSKAMTVVNMFMGDMFERIAQEAARLSDYTKRKTLSSREIEA 171

Query: 250 AVKLVLPGELGKHAVAEGAKAVTNYLQYVS 161
           AV+LVLPGEL +HAVAEG+KAV+NY+ Y S
Sbjct: 172 AVRLVLPGELSRHAVAEGSKAVSNYVGYGS 201


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