BLASTX nr result

ID: Cnidium21_contig00040342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040342
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER70114.1| S haplotype-specific F-box protein [Prunus armeni...    55   5e-06
emb|CAN90151.1| S haplotype-specific F-box protein [Prunus salic...    55   6e-06
gb|ABI15333.1| F-box protein SFB, partial [Prunus salicina]            55   6e-06
gb|ABL86030.1| S-locus F-box protein [Prunus tenella]                  55   8e-06

>gb|AER70114.1| S haplotype-specific F-box protein [Prunus armeniaca]
          Length = 144

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
 Frame = +1

Query: 31  YDNQNCQEFHKIKLPSAIPINTYWL-STSYCLICFSTIFNKGRITNYSGDIFLFNPLIQK 207
           + NQ  +E  K+  PS      YW+  +S  L+C S       I N+   I+++NP ++K
Sbjct: 31  FSNQTFEECSKLSHPSG-STEHYWIYGSSNGLVCISD-----EILNFDSPIYIWNPSVRK 84

Query: 208 YKXXXXXXXXXXXSRSVFLAFGYVPLINDYRVVKIVNYCDANEIALFSIFVYSLSSNSW 384
            +              V L FG+ P +NDY+VV++++    N+ AL +I VYSL ++SW
Sbjct: 85  SRTPPMSSNINIKFSHVALQFGFHPGVNDYKVVRMMH---TNKNAL-AIEVYSLRTDSW 139


>emb|CAN90151.1| S haplotype-specific F-box protein [Prunus salicina]
          Length = 331

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/118 (28%), Positives = 59/118 (50%)
 Frame = +1

Query: 31  YDNQNCQEFHKIKLPSAIPINTYWLSTSYCLICFSTIFNKGRITNYSGDIFLFNPLIQKY 210
           Y N+  +EF K+  P     +     +S  L+C S       I N+   I+++NP ++K+
Sbjct: 75  YSNETFEEFSKLSHPVGSTEHYVIYGSSNGLVCISD-----EILNFDSPIYIWNPSVRKF 129

Query: 211 KXXXXXXXXXXXSRSVFLAFGYVPLINDYRVVKIVNYCDANEIALFSIFVYSLSSNSW 384
           +              V L FG+ P +NDY+ V+++     N+ AL ++ VYSL ++SW
Sbjct: 130 RTTPMSTNINIKFSYVALQFGFHPRVNDYKAVRMMR---TNKNAL-AVEVYSLRTDSW 183


>gb|ABI15333.1| F-box protein SFB, partial [Prunus salicina]
          Length = 325

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/118 (28%), Positives = 59/118 (50%)
 Frame = +1

Query: 31  YDNQNCQEFHKIKLPSAIPINTYWLSTSYCLICFSTIFNKGRITNYSGDIFLFNPLIQKY 210
           Y N+  +EF K+  P     +     +S  L+C S       I N+   I+++NP ++K+
Sbjct: 65  YSNETFEEFSKLSHPVGSTEHYVIYGSSNGLVCISD-----EILNFDSPIYIWNPSVRKF 119

Query: 211 KXXXXXXXXXXXSRSVFLAFGYVPLINDYRVVKIVNYCDANEIALFSIFVYSLSSNSW 384
           +              V L FG+ P +NDY+ V+++     N+ AL ++ VYSL ++SW
Sbjct: 120 RTTPMSTNINIKFSYVALQFGFHPRVNDYKAVRMMR---TNKNAL-AVEVYSLRTDSW 173


>gb|ABL86030.1| S-locus F-box protein [Prunus tenella]
          Length = 364

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/118 (29%), Positives = 59/118 (50%)
 Frame = +1

Query: 31  YDNQNCQEFHKIKLPSAIPINTYWLSTSYCLICFSTIFNKGRITNYSGDIFLFNPLIQKY 210
           + NQ C+EF+K+  P     +     +S  L+C S       I N+   I ++NP ++K 
Sbjct: 87  FPNQTCEEFYKLSHPLGNTEHYGIYGSSNGLVCISD-----EILNFDSSIHIWNPSVRKL 141

Query: 211 KXXXXXXXXXXXSRSVFLAFGYVPLINDYRVVKIVNYCDANEIALFSIFVYSLSSNSW 384
           +              V L FG+ P +NDY+ V+++     N+ AL ++ VYSL ++SW
Sbjct: 142 RTTPISTNINMKFSLVSLQFGFHPGVNDYKAVRMMR---TNKGAL-AVEVYSLRTDSW 195


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