BLASTX nr result

ID: Cnidium21_contig00040320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040320
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]   139   3e-31
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   138   4e-31
emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]   136   2e-30
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...   135   3e-30
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   133   1e-29

>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
          Length = 1128

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/119 (58%), Positives = 90/119 (75%)
 Frame = -1

Query: 357  VERFKARLVAK*FTQTHGLDFFETFALVAKMTFFRVLLALSASQGWSMGQLDITNAFLHG 178
            VER+KARLVAK +TQ  GLDFF+T++ VAKMT  RVLLA++A++ W + QLD+ NAFLHG
Sbjct: 673  VERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAAAKQWYLHQLDVNNAFLHG 732

Query: 177  DLIEEVYMTLPPGYTPPQEVLQKYPGQPLAYRLKKSLYGLRQAPHQWFLKLSATLIKYG 1
            DL EEVYM LP G++ P +        P   +LKKSLYGLRQA  QW+ KLS++L+K+G
Sbjct: 733  DLNEEVYMQLPLGFSTPND--------PRVCKLKKSLYGLRQASRQWYSKLSSSLLKFG 783


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/119 (57%), Positives = 90/119 (75%)
 Frame = -1

Query: 357  VERFKARLVAK*FTQTHGLDFFETFALVAKMTFFRVLLALSASQGWSMGQLDITNAFLHG 178
            VER+KARLVAK +TQ  GLDFF+T++ VAKMT  RVLLA++A++ W + QLD+ NAFLH 
Sbjct: 979  VERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAATKQWYLHQLDVNNAFLHE 1038

Query: 177  DLIEEVYMTLPPGYTPPQEVLQKYPGQPLAYRLKKSLYGLRQAPHQWFLKLSATLIKYG 1
            DL E+VYM LPPG++ P +        P   +LKKSLYGLRQA  QW+ KLS++L+K+G
Sbjct: 1039 DLNEDVYMQLPPGFSTPND--------PRVCKLKKSLYGLRQASRQWYSKLSSSLLKFG 1089


>emb|CAN64502.1| hypothetical protein VITISV_020342 [Vitis vinifera]
          Length = 660

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/119 (57%), Positives = 88/119 (73%)
 Frame = -1

Query: 357 VERFKARLVAK*FTQTHGLDFFETFALVAKMTFFRVLLALSASQGWSMGQLDITNAFLHG 178
           VER+KARLVAK +TQ  GLDFF T++ +AKMT  RVLLA++ ++ W + QL++ NAFLHG
Sbjct: 355 VERYKARLVAKGYTQQEGLDFFNTYSPIAKMTIVRVLLAIATAKQWYLHQLNVNNAFLHG 414

Query: 177 DLIEEVYMTLPPGYTPPQEVLQKYPGQPLAYRLKKSLYGLRQAPHQWFLKLSATLIKYG 1
           DL EEVYM LPPG++ P +        P   +LKKSLYGLRQA  QW  KLS++L+K+G
Sbjct: 415 DLNEEVYMQLPPGFSTPND--------PQVCKLKKSLYGLRQASRQWNSKLSSSLLKFG 465


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  135 bits (341), Expect = 3e-30
 Identities = 68/119 (57%), Positives = 92/119 (77%)
 Frame = -1

Query: 357  VERFKARLVAK*FTQTHGLDFFETFALVAKMTFFRVLLALSASQGWSMGQLDITNAFLHG 178
            +ER+KARLVAK +TQT GLD+ +TF+ VAK+T  ++L+A++A++GWS+ QLDI+NAFL+G
Sbjct: 972  LERYKARLVAKGYTQTEGLDYVDTFSPVAKLTTVKLLIAVAAAKGWSLSQLDISNAFLNG 1031

Query: 177  DLIEEVYMTLPPGYTPPQEVLQKYPGQPLAYRLKKSLYGLRQAPHQWFLKLSATLIKYG 1
             L EE+YMTLPPGY+P Q     +P   +  RLKKSLYGL+QA  QW+LK S +L   G
Sbjct: 1032 SLDEEIYMTLPPGYSPRQG--DSFPPNAVC-RLKKSLYGLKQASRQWYLKFSESLKALG 1087


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/120 (58%), Positives = 92/120 (76%), Gaps = 1/120 (0%)
 Frame = -1

Query: 357  VERFKARLVAK*FTQTHGLDFFETFALVAKMTFFRVLLALSASQGWSMGQLDITNAFLHG 178
            +ERFKARLVAK +TQ  GLD+++TF+ VAKMT  + LL+++A + WS+ QLDI+NAFL+G
Sbjct: 1017 LERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLSVAAIKEWSLHQLDISNAFLNG 1076

Query: 177  DLIEEVYMTLPPGYTPPQ-EVLQKYPGQPLAYRLKKSLYGLRQAPHQWFLKLSATLIKYG 1
            DL EE+YMTLPPGY+  Q  VL + P      +L+KSLYGL+QA  QW+LK S+TL K G
Sbjct: 1077 DLKEEIYMTLPPGYSMKQGGVLPQNP----VLKLQKSLYGLKQASRQWYLKFSSTLKKLG 1132


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