BLASTX nr result

ID: Cnidium21_contig00040319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040319
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320619.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
gb|AET08936.1| GTP cyclohydrolase I [Solanum lycopersicum]             57   1e-06
ref|NP_001234141.1| GTP cyclohydrolase I [Solanum lycopersicum] ...    57   1e-06
ref|XP_002531084.1| GTP cyclohydrolase I, putative [Ricinus comm...    57   2e-06
ref|XP_002301805.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_002320619.1| predicted protein [Populus trichocarpa] gi|222861392|gb|EEE98934.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 28/38 (73%), Positives = 35/38 (92%)
 Frame = -1

Query: 548 IEKFGSSTATMAVLGRFATEPAARAIFLQSIPPSNTGG 435
           IEKFGSSTAT+AVLGRF+T+PAARA+FL++IP   +GG
Sbjct: 427 IEKFGSSTATIAVLGRFSTDPAARAMFLKNIPNPASGG 464


>gb|AET08936.1| GTP cyclohydrolase I [Solanum lycopersicum]
          Length = 456

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 548 IEKFGSSTATMAVLGRFATEPAARAIFLQSIPPSNTGG 435
           IEKFGS+TAT AVLGRF+T+P ARA FLQS+P S + G
Sbjct: 418 IEKFGSNTATFAVLGRFSTDPVARAKFLQSLPDSGSAG 455


>ref|NP_001234141.1| GTP cyclohydrolase I [Solanum lycopersicum]
           gi|17979018|gb|AAL49957.1| GTP cyclohydrolase I [Solanum
           lycopersicum]
          Length = 456

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 548 IEKFGSSTATMAVLGRFATEPAARAIFLQSIPPSNTGG 435
           IEKFGS+TAT AVLGRF+T+P ARA FLQS+P S + G
Sbjct: 418 IEKFGSNTATFAVLGRFSTDPVARAKFLQSLPDSGSAG 455


>ref|XP_002531084.1| GTP cyclohydrolase I, putative [Ricinus communis]
           gi|223529330|gb|EEF31298.1| GTP cyclohydrolase I,
           putative [Ricinus communis]
          Length = 469

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = -1

Query: 548 IEKFGSSTATMAVLGRFATEPAARAIFLQSIPPSNTGG 435
           IEKFGS+TAT+AVLGRF+T+P++RA+FLQSIP S   G
Sbjct: 430 IEKFGSNTATIAVLGRFSTDPSSRAMFLQSIPNSAACG 467


>ref|XP_002301805.1| predicted protein [Populus trichocarpa] gi|222843531|gb|EEE81078.1|
           predicted protein [Populus trichocarpa]
          Length = 465

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -1

Query: 548 IEKFGSSTATMAVLGRFATEPAARAIFLQSIPPSNTGG 435
           IEKFGSSTAT+AVLG F+T+PAARA FLQ+IP   +GG
Sbjct: 425 IEKFGSSTATIAVLGLFSTDPAARAKFLQNIPNPASGG 462


Top