BLASTX nr result

ID: Cnidium21_contig00040318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040318
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    88   2e-15
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    87   4e-15
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    84   2e-14
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]    84   2e-14

>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 82/236 (34%), Positives = 115/236 (48%), Gaps = 31/236 (13%)
 Frame = +1

Query: 4   PHLIFDDEF--ISRLDSMIKEEDLLYEIVTTISNILLSHSGPILKFHLFIPGDLPLYQTS 177
           PHL+FD +   I+  D  I + +L    V  I N+LL H+GPI KF L    DL L  + 
Sbjct: 46  PHLVFDTQCASITSQDQTIAKNNL----VNIIDNVLLLHNGPIYKFKLS-HRDL-LGVSD 99

Query: 178 MDSWIQNIANNRIR--MLEIVNNPVIAYKLPSYLFSCVELTHLQLSNCILNAPLHFRGFC 351
           +D WI +++    +  +LEI       YKLPS LFS   LTHL+L NC+L  P  F+GF 
Sbjct: 100 IDRWILHLSRGSTKEFVLEIWKGQ--RYKLPSCLFSFENLTHLELFNCLLKPPPAFKGFR 157

Query: 352 NLISVKLRHVEIIAD-----MSFGTQLEKLDLRRCTGIKHL------------GWQFNYN 480
           NL S+ L+HV +  +     +S    LE+L L    G  HL            G  F+  
Sbjct: 158 NLKSLDLQHVTLAQEVFENLISSCALLERLTLMNFDGFTHLKINAPNLQFFDIGGIFDDV 217

Query: 481 S--NLSKLKIVDSDINLQWKNSIFL-----DTLLR---NIPRIHFLCLDGHFLKFL 618
           S  N S L +V   +    KN   +       LLR   N+P +  L +  +F+K+L
Sbjct: 218 SFHNTSLLTLVSIGLYANVKNDRHVSRGSSSKLLRFFVNLPHLRRLEIQSYFIKYL 273


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 76/237 (32%), Positives = 118/237 (49%), Gaps = 32/237 (13%)
 Frame = +1

Query: 4   PHLIFDDEFIS---RLDSMIKEEDLLYEIVTTISNILLSHSGPILKFHLFIPGDLPLYQT 174
           PHL+FD++ +S   +  ++IK++     +V  I ++LL H+GPI KF L    DL L  +
Sbjct: 56  PHLVFDNKCVSIPSQDQTLIKDK-----LVNIIDHVLLLHNGPIQKFKLS-HRDL-LGVS 108

Query: 175 SMDSWIQNIANNRIR--MLEIVNNPVIAYKLPSYLFSCVELTHLQLSNCILNAPLHFRGF 348
            +D WI +++ + I+  +LEI       YK+PS LFS   L HL+L NC+L  PL F+GF
Sbjct: 109 DIDRWILHLSRSSIKEFILEIWKGQ--RYKVPSSLFSFEHLIHLELFNCLLQPPLTFKGF 166

Query: 349 CNLISVKLRHV----EIIADMSFGTQ-LEKLDLRRCTGIKHLGWQ--------------- 468
            +L S+ L+H+     +  ++ F    LE+L L    G  HL                  
Sbjct: 167 RSLKSLDLQHITLTQNVFENLIFSCPLLERLTLMNFDGFTHLNINAPNLQFFDIGGVYDD 226

Query: 469 --FNYNSNLSKLKI-----VDSDINLQWKNSIFLDTLLRNIPRIHFLCLDGHFLKFL 618
             F     L+ + I     V +D N+   +S  L     N+P I  L +  +FLK+L
Sbjct: 227 VTFENTFQLTLVSIGLYVNVQNDRNVGHGSSSKLLRFFANLPHIRRLEVQSYFLKYL 283


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 85.9 bits (211), Expect = 6e-15
 Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 29/234 (12%)
 Frame = +1

Query: 4   PHLIFDDEFISRLDSMIKEEDLLYEIVTTISNILLSHSGPILKFHLFIPGDLPLYQTSMD 183
           PH++FD + IS   S   +  +  ++V  I +ILL H+GPI KF L    DL L  + +D
Sbjct: 135 PHIVFDSQGISI--SSQDQTTIKNKLVNIIDHILLLHNGPIYKFKLS-HCDL-LAVSDID 190

Query: 184 SWIQNIANNRIR--MLEIVNNPVIAYKLPSYLFSCVELTHLQLSNCILNAPLHFRGFCNL 357
            WI +++    +  +LEI       YKLPS LFS   L +L+L NC+L  PL F+GF NL
Sbjct: 191 RWILHLSRGSTKEFVLEIWKGQ--QYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNL 248

Query: 358 ISVKLRHVEIIAD-----MSFGTQLEKLDLRRCTGIKHLG-----------------WQF 471
            ++ L+HV +  +     +S    LE+L L    G  HL                    F
Sbjct: 249 KNLDLQHVTLAQEVFEKLISSCAMLERLTLINFDGFTHLNINAPNLQFFDVGGVFDDVSF 308

Query: 472 NYNSNLSKLKI-----VDSDINLQWKNSIFLDTLLRNIPRIHFLCLDGHFLKFL 618
                L+ + I     V +D N+ + +S  L     N+P +  L +  +FLK+L
Sbjct: 309 ENTFVLALVSIGLYVNVKNDQNVSYGSSSKLLRFFVNLPHVRRLEIQSYFLKYL 362


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 36/241 (14%)
 Frame = +1

Query: 4   PHLIFDDEFISRLDSMIKEED---LLYEIVTTISNILLSHSGPILKFHL----FIPGDLP 162
           P+L+FD++ +S     I  +D   +  ++V  I ++LL H+GPI KF L    F+ G   
Sbjct: 46  PYLVFDNQCVS-----ISSQDQTLVKNKLVNIIDHVLLLHTGPIHKFRLSHRDFLGG--- 97

Query: 163 LYQTSMDSWIQNIANNRIR--MLEIVNNPVIAYKLPSYLFSCVELTHLQLSNCILNAPLH 336
              + +D WI  ++   IR  +LEI       YKLPS L++C  L HL+L N +L  P  
Sbjct: 98  ---SDIDRWILYLSRTPIREFILEIWKGQ--HYKLPSCLYNCQSLIHLELFNSLLKPPPT 152

Query: 337 FRGFCNLISVKLRHVEIIAD-----MSFGTQLEKLDLRRCTGIKHLG------------- 462
           F+GF +L S+ L+H+ +  D     +S    LEK  L    G  HL              
Sbjct: 153 FKGFMSLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGG 212

Query: 463 --WQFNYNSN--LSKLKI-----VDSDINLQWKNSIFLDTLLRNIPRIHFLCLDGHFLKF 615
             +  N+ +   L+ + I     + +D NL   NS  L     ++PRI  L +  +FLK+
Sbjct: 213 VFYDVNFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKY 272

Query: 616 L 618
           L
Sbjct: 273 L 273


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 75/241 (31%), Positives = 116/241 (48%), Gaps = 36/241 (14%)
 Frame = +1

Query: 4   PHLIFDDEFISRLDSMIKEED---LLYEIVTTISNILLSHSGPILKFHL----FIPGDLP 162
           P+L+FD++ +S     I  +D   +  ++V  I ++LL H+GPI KF L    F+ G   
Sbjct: 46  PYLVFDNQCVS-----ISSQDQTLVKNKLVNIIDHVLLLHTGPIHKFRLSHRDFLGG--- 97

Query: 163 LYQTSMDSWIQNIANNRIR--MLEIVNNPVIAYKLPSYLFSCVELTHLQLSNCILNAPLH 336
              + +D WI  ++   IR  +LEI       YKLPS L++C  L HL+L N +L  P  
Sbjct: 98  ---SDIDRWILYLSRTPIREFILEIWKGQ--HYKLPSCLYNCQSLIHLELFNSLLKPPPT 152

Query: 337 FRGFCNLISVKLRHVEIIAD-----MSFGTQLEKLDLRRCTGIKHLG------------- 462
           F+GF +L S+ L+H+ +  D     +S    LEK  L    G  HL              
Sbjct: 153 FKGFXSLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGFTHLNIHAPNLQFFDTGG 212

Query: 463 --WQFNYNSN--LSKLKI-----VDSDINLQWKNSIFLDTLLRNIPRIHFLCLDGHFLKF 615
             +  N+ +   L+ + I     + +D NL   NS  L     ++PRI  L +  +FLK+
Sbjct: 213 VFYDVNFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFAHLPRIQRLEIQSYFLKY 272

Query: 616 L 618
           L
Sbjct: 273 L 273


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