BLASTX nr result

ID: Cnidium21_contig00040268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040268
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318236.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002318218.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002322472.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
gb|ABK94395.1| unknown [Populus trichocarpa]                           89   3e-16
emb|CBI22737.3| unnamed protein product [Vitis vinifera]               85   5e-15

>ref|XP_002318236.1| predicted protein [Populus trichocarpa] gi|222858909|gb|EEE96456.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
 Frame = -1

Query: 291 VTHLARDCPNKGIR-STGFGKISARLEDRPTGQVTKLTSGDDLDDDFTMEDAHTGDAEEP 115
           VTHLARDCP+KG+R S   GK +   E RPTG+VTK  SGD+LDDDF   + ++   ++ 
Sbjct: 184 VTHLARDCPDKGLRGSAATGKEATGREVRPTGRVTKFVSGDELDDDFMTGNMYSIPEDKS 243

Query: 114 VDEKI-PSLVPESNEKTKKKQGPRVVNFVG 28
            D KI PS+  + + K+KKKQGP+VVNFVG
Sbjct: 244 SDSKIDPSVSKDVHVKSKKKQGPKVVNFVG 273


>ref|XP_002318218.1| predicted protein [Populus trichocarpa] gi|222858891|gb|EEE96438.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
 Frame = -1

Query: 291 VTHLARDCPNKGIR-STGFGKISARLEDRPTGQVTKLTSGDDLDDDFTMEDAHTGDAEEP 115
           VTHLARDCP+KG+R S   GK +   E RPTG+VTK  SGD+LDDDF   + ++   ++ 
Sbjct: 44  VTHLARDCPDKGLRGSAATGKEATGREVRPTGRVTKFVSGDELDDDFMTGNMYSIPEDKS 103

Query: 114 VDEKI-PSLVPESNEKTKKKQGPRVVNFVG 28
            D KI PS+  + + K+KKKQGP+VVNFVG
Sbjct: 104 SDSKIDPSVSKDVHVKSKKKQGPKVVNFVG 133


>ref|XP_002322472.1| predicted protein [Populus trichocarpa] gi|222869468|gb|EEF06599.1|
           predicted protein [Populus trichocarpa]
          Length = 278

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
 Frame = -1

Query: 291 VTHLARDCPNKGIRS-TGFGKISARLEDRPTGQVTKLTSGDDLDDDFTMEDAHTGDAEEP 115
           VTHLARDCP+KG R    FG+ +   E RPTG+VTK  SGD+LDDDF  E+ ++   ++ 
Sbjct: 189 VTHLARDCPDKGKRGDAAFGRGAIGREVRPTGRVTKFVSGDELDDDFMTENMYSIPKDKS 248

Query: 114 VDEK-IPSLVPESNEKTKKKQGPRVVNFVG 28
            D K +P    + + K+KKKQGP++VNFVG
Sbjct: 249 TDSKVVPPDSKDGHVKSKKKQGPKIVNFVG 278


>gb|ABK94395.1| unknown [Populus trichocarpa]
          Length = 278

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
 Frame = -1

Query: 291 VTHLARDCPNKGIRS-TGFGKISARLEDRPTGQVTKLTSGDDLDDDFTMEDAHTGDAEEP 115
           VTHLARDCP+KG R    FG+ +   E RPTG+VTK  SGD+LDDDF  E+ ++   ++ 
Sbjct: 189 VTHLARDCPDKGKRGDAAFGRGAIGREVRPTGRVTKFVSGDELDDDFMTENMYSIPKDKS 248

Query: 114 VDEK-IPSLVPESNEKTKKKQGPRVVNFVG 28
            D K +P    + + K+KKKQGP++VNFVG
Sbjct: 249 TDSKVVPPDSKDGHVKSKKKQGPKIVNFVG 278


>emb|CBI22737.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
 Frame = -1

Query: 291 VTHLARDCPNKGIRSTGFGKISARLEDRPTGQVTKLTSGDDLDDDFTMEDAHTGDAEEPV 112
           VTHLA+DCPNKG  ++    I+  ++     +VTK  SGDDLDDDF + D +TG  E+  
Sbjct: 190 VTHLAKDCPNKGCNNSPVAAIAGGIKHEERPKVTKFVSGDDLDDDFMVADTYTGYKEKSS 249

Query: 111 DEKIPSLVPESNE---KTKKKQGPRVVNFVG 28
           + K+    PES     K KKKQGP VVNFVG
Sbjct: 250 EAKVHP-TPESKNSHVKPKKKQGPNVVNFVG 279


Top