BLASTX nr result

ID: Cnidium21_contig00040243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040243
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42699.1|METE_CATRO RecName: Full=5-methyltetrahydropteroyltr...   176   1e-42
gb|ADO87039.1| pollen allergen MetE [Amaranthus retroflexus]          174   7e-42
ref|XP_002882307.1| hypothetical protein ARALYDRAFT_477628 [Arab...   174   7e-42
ref|XP_002871787.1| cobalamin-independent methionine synthase [A...   174   9e-42
gb|ABI35986.1| methionine synthase [Orobanche ramosa]                 174   9e-42

>sp|Q42699.1|METE_CATRO RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase; AltName: Full=Cobalamin-independent
           methionine synthase isozyme; AltName:
           Full=Vitamin-B12-independent methionine synthase isozyme
           gi|886471|emb|CAA58474.1| methionine synthase
           [Catharanthus roseus]
          Length = 765

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/103 (82%), Positives = 93/103 (90%)
 Frame = +2

Query: 2   YKTITSLKAITGFGFDLVRGSKTIDWVKGGFPSGKYLFAGVVDGRNIWANDLTASLGTLQ 181
           YK +T+LK +TGFGFDLVRG+KT+D +KGGFPSGKYLFAGVVDGRNIWANDL ASL TLQ
Sbjct: 252 YKILTALKGVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSTLQ 311

Query: 182 SLEGLVGKGKLVVSTSCSLLHTAVDKANETMLDEEIKSWLAFA 310
           SLEG+VGK KLVVSTSCSLLHTAVD  NE  LD+EIKSWLAFA
Sbjct: 312 SLEGIVGKDKLVVSTSCSLLHTAVDLVNEPKLDKEIKSWLAFA 354


>gb|ADO87039.1| pollen allergen MetE [Amaranthus retroflexus]
          Length = 757

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/103 (80%), Positives = 92/103 (89%)
 Frame = +2

Query: 2   YKTITSLKAITGFGFDLVRGSKTIDWVKGGFPSGKYLFAGVVDGRNIWANDLTASLGTLQ 181
           YKT+ SLK +TGFGFDLVRG+KT+D +KGGFPSGKYLFAGVVDGRNIWANDL +SL TLQ
Sbjct: 252 YKTLVSLKGVTGFGFDLVRGTKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLASSLATLQ 311

Query: 182 SLEGLVGKGKLVVSTSCSLLHTAVDKANETMLDEEIKSWLAFA 310
            LE +VGK KLVVSTSCSLLHTAVD  N+T LD+EIKSWLAFA
Sbjct: 312 GLESIVGKDKLVVSTSCSLLHTAVDLVNKTKLDDEIKSWLAFA 354


>ref|XP_002882307.1| hypothetical protein ARALYDRAFT_477628 [Arabidopsis lyrata subsp.
           lyrata] gi|297328147|gb|EFH58566.1| hypothetical protein
           ARALYDRAFT_477628 [Arabidopsis lyrata subsp. lyrata]
          Length = 765

 Score =  174 bits (441), Expect = 7e-42
 Identities = 86/103 (83%), Positives = 91/103 (88%)
 Frame = +2

Query: 2   YKTITSLKAITGFGFDLVRGSKTIDWVKGGFPSGKYLFAGVVDGRNIWANDLTASLGTLQ 181
           YKT+TSLK +T FGFDLVRG+KTID +K GFP GKYLFAGVVDGRNIWANDL ASL TLQ
Sbjct: 252 YKTLTSLKGVTAFGFDLVRGTKTIDLIKAGFPQGKYLFAGVVDGRNIWANDLAASLITLQ 311

Query: 182 SLEGLVGKGKLVVSTSCSLLHTAVDKANETMLDEEIKSWLAFA 310
           SLEG+VGK KLVVSTSCSLLHTAVD  NET LD EIKSWLAFA
Sbjct: 312 SLEGVVGKDKLVVSTSCSLLHTAVDLVNETKLDAEIKSWLAFA 354


>ref|XP_002871787.1| cobalamin-independent methionine synthase [Arabidopsis lyrata
           subsp. lyrata] gi|297317624|gb|EFH48046.1|
           cobalamin-independent methionine synthase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 765

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/103 (81%), Positives = 91/103 (88%)
 Frame = +2

Query: 2   YKTITSLKAITGFGFDLVRGSKTIDWVKGGFPSGKYLFAGVVDGRNIWANDLTASLGTLQ 181
           YKT+TSLK +T FGFDLVRG+KT+D VK GFP GKYLFAGVVDGRNIWAND  ASL TLQ
Sbjct: 252 YKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQ 311

Query: 182 SLEGLVGKGKLVVSTSCSLLHTAVDKANETMLDEEIKSWLAFA 310
           +LEG+VGK KLVVSTSCSLLHTAVD  NET LD+EIKSWLAFA
Sbjct: 312 ALEGIVGKDKLVVSTSCSLLHTAVDLINETKLDDEIKSWLAFA 354


>gb|ABI35986.1| methionine synthase [Orobanche ramosa]
          Length = 765

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/103 (80%), Positives = 94/103 (91%)
 Frame = +2

Query: 2   YKTITSLKAITGFGFDLVRGSKTIDWVKGGFPSGKYLFAGVVDGRNIWANDLTASLGTLQ 181
           YK +TSL A++GFGFDLVRG++T+D +KGGFPSGKYLFAGVVDGRNIWANDL+ASL TLQ
Sbjct: 252 YKALTSLSAVSGFGFDLVRGTQTLDLIKGGFPSGKYLFAGVVDGRNIWANDLSASLCTLQ 311

Query: 182 SLEGLVGKGKLVVSTSCSLLHTAVDKANETMLDEEIKSWLAFA 310
           SLEG++GK KLVVSTSCSLLHTAVD  NE  LD+EIKSWLAFA
Sbjct: 312 SLEGIIGKDKLVVSTSCSLLHTAVDLVNEPKLDQEIKSWLAFA 354


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