BLASTX nr result

ID: Cnidium21_contig00040230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040230
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa Japonica Group]          70   1e-10
gb|AAM15154.1| unknown protein [Arabidopsis thaliana] gi|2019816...    67   1e-09
ref|XP_003600646.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    65   8e-09
ref|XP_003590268.1| ATP-dependent helicase, putative [Medicago t...    63   2e-08
ref|XP_003590243.1| Helicase-like protein [Medicago truncatula] ...    63   2e-08

>emb|CAE04650.2| OSJNBa0061G20.6 [Oryza sativa Japonica Group]
          Length = 1410

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/86 (43%), Positives = 49/86 (56%)
 Frame = -1

Query: 260 WVLDIGNGNILPPNCEIDSCHEFDISIPTTFCNLEDCNSVENMIKSVYPDLLENFKDPNY 81
           WVLDIGNG I P   + D      + IP       D   +  +I  V+PDLL N ++P Y
Sbjct: 442 WVLDIGNGTI-PATVKNDESEPSWVQIPDDLLIKTDGEKIPALINEVFPDLLNNHRNPEY 500

Query: 80  ISERAILTPTNQTVSYINSRIVDMLP 3
           +S RAI+ P N TV  INS +V+M+P
Sbjct: 501 LSCRAIVCPNNATVDDINSYVVNMIP 526


>gb|AAM15154.1| unknown protein [Arabidopsis thaliana] gi|20198162|gb|AAM15435.1|
            unknown protein [Arabidopsis thaliana]
          Length = 1308

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/86 (38%), Positives = 50/86 (58%)
 Frame = -1

Query: 260  WVLDIGNGNILPPNCEIDSCHEFDISIPTTFCNLEDCNSVENMIKSVYPDLLENFKDPNY 81
            W+L +G+G +  PN       E  I IP     L+  + ++++   VYP+LL+N  D  +
Sbjct: 1030 WILKLGDGKLSEPNDG-----EAAIDIPEDMLLLDSLHPIDSIANCVYPNLLQNLNDQTF 1084

Query: 80   ISERAILTPTNQTVSYINSRIVDMLP 3
              ERAIL PTN  VS +N+ I+D+LP
Sbjct: 1085 FRERAILCPTNDDVSEVNNHIMDLLP 1110


>ref|XP_003600646.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355489694|gb|AES70897.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 753

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/86 (37%), Positives = 48/86 (55%)
 Frame = -1

Query: 260 WVLDIGNGNILPPNCEIDSCHEFDISIPTTFCNLEDCNSVENMIKSVYPDLLENFKDPNY 81
           WVL IG+G+I   N E       DI IP         + + +++ ++YP LL+   DP+Y
Sbjct: 481 WVLGIGDGSIGDANDEA-----IDIEIPDDLLIQSSSDHIASIVDTIYPSLLDEMHDPSY 535

Query: 80  ISERAILTPTNQTVSYINSRIVDMLP 3
             +RAILTP N TV  IN  ++ ++P
Sbjct: 536 FQDRAILTPKNATVEEINDYVMSLIP 561


>ref|XP_003590268.1| ATP-dependent helicase, putative [Medicago truncatula]
            gi|355479316|gb|AES60519.1| ATP-dependent helicase,
            putative [Medicago truncatula]
          Length = 1790

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/86 (34%), Positives = 50/86 (58%)
 Frame = -1

Query: 260  WVLDIGNGNILPPNCEIDSCHEFDISIPTTFCNLEDCNSVENMIKSVYPDLLENFKDPNY 81
            W+LD+G+G +      ID+  E  I IP   C     N V ++++S YP+LL N K+ ++
Sbjct: 1581 WILDVGDGKL-----GIDNDGEAVIEIPDDICLKNSGNHVGDIVESTYPNLLSNMKESSF 1635

Query: 80   ISERAILTPTNQTVSYINSRIVDMLP 3
              +RAIL PT + V  +N  ++ ++P
Sbjct: 1636 FQDRAILAPTLELVEKVNDYVLSLVP 1661


>ref|XP_003590243.1| Helicase-like protein [Medicago truncatula]
           gi|355479291|gb|AES60494.1| Helicase-like protein
           [Medicago truncatula]
          Length = 714

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/86 (34%), Positives = 50/86 (58%)
 Frame = -1

Query: 260 WVLDIGNGNILPPNCEIDSCHEFDISIPTTFCNLEDCNSVENMIKSVYPDLLENFKDPNY 81
           W+LD+G+G +      ID+  E  I IP   C     N V ++++S YP+LL N K+ ++
Sbjct: 505 WILDVGDGKL-----GIDNDGEAVIEIPDDICLKNSGNHVGDIVESTYPNLLSNMKESSF 559

Query: 80  ISERAILTPTNQTVSYINSRIVDMLP 3
             +RAIL PT + V  +N  ++ ++P
Sbjct: 560 FQDRAILAPTLELVEKVNDYVLSLVP 585


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