BLASTX nr result

ID: Cnidium21_contig00040147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040147
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318837.1| predicted protein [Populus trichocarpa] gi|2...    66   1e-08
ref|XP_002510837.1| Transcriptional corepressor SEUSS, putative ...    65   3e-08
ref|XP_004157230.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    63   1e-07
ref|XP_002321887.1| predicted protein [Populus trichocarpa] gi|2...    60   9e-07
ref|XP_004140789.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    58   3e-06

>ref|XP_002318837.1| predicted protein [Populus trichocarpa] gi|222859510|gb|EEE97057.1|
           predicted protein [Populus trichocarpa]
          Length = 873

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
 Frame = +3

Query: 231 VAVGRQLAKNLQMPSLL-CGIFQTICTMLTD**ISKLVNSRKVFWISAIDQNIGGL---- 395
           +  GRQLAK+L++ SL   G  +     L    IS++VNS K       +Q  G +    
Sbjct: 518 LTAGRQLAKSLELQSLNDLGFSKRYVRCLQ---ISEVVNSMKDLIDFCREQKAGPIEGLK 574

Query: 396 -----LTCANLQLQKVQALKR--SIQSFSTNRNTVSKLSGHWAQHHGLDNQWSNNQKMVG 554
                 T A LQ+QK+Q +++  S+Q   T+RNT++KL    A H G++N  ++N +MVG
Sbjct: 575 SYPRHATAAKLQMQKMQEMEQLASVQGLPTDRNTINKLM---ALHPGINNHVNSNNQMVG 631

Query: 555 RGALGGFTEAAFS 593
           RGAL G  +AA +
Sbjct: 632 RGALSGSAQAALA 644


>ref|XP_002510837.1| Transcriptional corepressor SEUSS, putative [Ricinus communis]
           gi|223549952|gb|EEF51439.1| Transcriptional corepressor
           SEUSS, putative [Ricinus communis]
          Length = 745

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
 Frame = +3

Query: 231 VAVGRQLAKNLQMPSLL-CGIFQTICTMLTD**ISKLVNSRKVFWISAIDQNIGGL---- 395
           +  GRQLAK L++ SL   G  +     L    IS++VNS K       +QN+G +    
Sbjct: 392 LTAGRQLAKTLELQSLNDLGFSKRYVRCLQ---ISEVVNSMKDLIDFCREQNVGPIEGLK 448

Query: 396 -----LTCANLQLQKVQALKR--SIQSFSTNRNTVSKLSGHWAQHHGLDNQWSNNQKMVG 554
                 + A LQ+QK+Q +++  ++Q   T+RNT++KL    A H G++N  SNN  M  
Sbjct: 449 SYPRHTSVAKLQMQKMQEMEQLANVQGLPTDRNTLNKLM---ALHPGINNHMSNNHHMAN 505

Query: 555 RGALGGFTEAAFS 593
           RGAL G  +AA +
Sbjct: 506 RGALSGSAQAALA 518


>ref|XP_004157230.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101219560
           [Cucumis sativus]
          Length = 823

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
 Frame = +3

Query: 231 VAVGRQLAKNLQMPSLL-CGIFQTICTMLTD**ISKLVNSRKVFWISAIDQNIGGL---- 395
           +  GRQLAK+L++  L   G  +     L    IS++VNS K       DQ +G +    
Sbjct: 470 LTAGRQLAKSLELQLLNDLGFSKRYVRCLQ---ISEVVNSMKDLIGFCRDQKVGPIEGLK 526

Query: 396 -----LTCANLQLQKVQALKR--SIQSFSTNRNTVSKLSGHWAQHHGLDNQWSNNQKMVG 554
                 T A LQ+QK+Q +++  SIQ   T+RNT++KL      H  LDN   NN +M+G
Sbjct: 527 NYPRHATAAKLQMQKMQEMEQLVSIQGLPTDRNTINKLM---TLHPELDNHGMNNHQMIG 583

Query: 555 RGALGGFTEAAFS 593
           RG   G  +AA +
Sbjct: 584 RGGFSGSAQAALA 596


>ref|XP_002321887.1| predicted protein [Populus trichocarpa] gi|222868883|gb|EEF06014.1|
           predicted protein [Populus trichocarpa]
          Length = 472

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 12/133 (9%)
 Frame = +3

Query: 231 VAVGRQLAKNLQMPSLL-CGIFQTICTMLTD**ISKLVNSRKVFWISAIDQNIGGL---- 395
           +   RQLAK+L++ SL   G  +     L    IS++VNS K       +Q +G +    
Sbjct: 147 LTASRQLAKSLELQSLNDLGFSKRYVRCLQ---ISEVVNSMKDLIDFCREQKVGPIEGLK 203

Query: 396 -----LTCANLQLQKVQALKR--SIQSFSTNRNTVSKLSGHWAQHHGLDNQWSNNQKMVG 554
                 T A LQ+QK+Q +++  S+Q   T+RNT++KL    A H G+++  + N +MVG
Sbjct: 204 SYPRHATAAKLQIQKMQEMEQLASVQGLPTDRNTLNKLM---ALHPGINSHVNTNHQMVG 260

Query: 555 RGALGGFTEAAFS 593
           RG L G  +AA +
Sbjct: 261 RGTLSGPAQAALA 273


>ref|XP_004140789.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101219560 [Cucumis sativus]
          Length = 786

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
 Frame = +3

Query: 327 ISKLVNSRKVFWISAIDQNIGGL---------LTCANLQLQKVQALKR--SIQSFSTNRN 473
           IS++VNS K       DQ +G +          T A LQ+QK+Q +++  SIQ   T+RN
Sbjct: 463 ISEVVNSMKDLIGFCRDQKVGPIEGLKNYPRHATAAKLQMQKMQEMEQLVSIQGLPTDRN 522

Query: 474 TVSKLSGHWAQHHGLDNQWSNNQKMVGRGALGGFTEAAFS 593
           T++KL      H  LDN   NN +M+GRG   G  +AA +
Sbjct: 523 TINKLM---TLHPELDNHGMNNHQMIGRGGFSGSAQAALA 559


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