BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040132
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   165   5e-39
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   165   5e-39
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   153   2e-35
gb|AAG51690.1|AC016972_9 hypothetical protein; 66200-63606 [Arab...   140   1e-31
ref|NP_177277.2| pentatricopeptide repeat-containing protein [Ar...   140   1e-31

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score =  165 bits (417), Expect = 5e-39
 Identities = 85/186 (45%), Positives = 125/186 (67%), Gaps = 3/186 (1%)
 Frame = +3

Query: 6    VYDKMSDSNITPDVKTNTHMLLCYLKSERTASALKFFNELKGERKAGKKLCQCLIIGLCR 185
            V++ M  S I P++ ++  ML  YLK+ER + AL FF++L+  RK G+KLC  +++GLC+
Sbjct: 620  VFEMMVRSGIVPNLSSDILMLQSYLKNERISDALNFFSDLQKRRKVGRKLCNTMVVGLCK 679

Query: 186  MNKAEMALSYVKEMKRDNETPSLRCFEELVLVLCNNSKYDEVVHVVDDTIRDGRTLSTFI 365
             NK ++AL  +KE++    TPSL C+EELV VLC N +YD VV+++DD  R GR +S+FI
Sbjct: 680  ANKVDIALEILKEIREKGVTPSLECYEELVKVLCTNKRYDVVVNLIDDLERVGRHVSSFI 739

Query: 366  GNLLLLHSFRAEHLYYYWVRSR--HN-TTSFSWEIGELIRAFSPYITDIPNIEDLEEVIQ 536
            GN+LLLHS +   L+  WV ++  HN  +S +  +G+LI  FS  I    +   LEEV+Q
Sbjct: 740  GNVLLLHSLKTPELFETWVHAKDAHNEISSPNLILGQLIGEFSGCIGVNQDFNYLEEVMQ 799

Query: 537  QLFPMD 554
            Q FP+D
Sbjct: 800  QCFPLD 805


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  165 bits (417), Expect = 5e-39
 Identities = 85/186 (45%), Positives = 125/186 (67%), Gaps = 3/186 (1%)
 Frame = +3

Query: 6    VYDKMSDSNITPDVKTNTHMLLCYLKSERTASALKFFNELKGERKAGKKLCQCLIIGLCR 185
            V++ M  S I P++ ++  ML  YLK+ER + AL FF++L+  RK G+KLC  +++GLC+
Sbjct: 620  VFEMMVRSGIVPNLSSDILMLQSYLKNERISDALNFFSDLQKRRKVGRKLCNTMVVGLCK 679

Query: 186  MNKAEMALSYVKEMKRDNETPSLRCFEELVLVLCNNSKYDEVVHVVDDTIRDGRTLSTFI 365
             NK ++AL  +KE++    TPSL C+EELV VLC N +YD VV+++DD  R GR +S+FI
Sbjct: 680  ANKVDIALEILKEIREKGVTPSLECYEELVKVLCKNKRYDVVVNLIDDLERVGRHVSSFI 739

Query: 366  GNLLLLHSFRAEHLYYYWVRSR--HN-TTSFSWEIGELIRAFSPYITDIPNIEDLEEVIQ 536
            GN+LLLHS +   L+  WV ++  HN  +S +  +G+LI  FS  I    +   LEEV+Q
Sbjct: 740  GNVLLLHSLKTPELFETWVHAKDAHNEISSPNLILGQLIGEFSGCIGVNQDFNYLEEVMQ 799

Query: 537  QLFPMD 554
            Q FP+D
Sbjct: 800  QCFPLD 805


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  153 bits (387), Expect = 2e-35
 Identities = 78/186 (41%), Positives = 121/186 (65%), Gaps = 3/186 (1%)
 Frame = +3

Query: 6    VYDKMSDSNITPDVKTNTHMLLCYLKSERTASALKFFNELKGERKAGKKLCQCLIIGLCR 185
            V++ M  S I P+  TN  ML  YLKSER + AL FF+ +   RK G+KL   +++GLC+
Sbjct: 634  VFEMMQRSGIEPNQSTNILMLQSYLKSERISDALNFFDAVGQRRKIGRKLYNTMVVGLCK 693

Query: 186  MNKAEMALSYVKEMKRDNETPSLRCFEELVLVLCNNSKYDEVVHVVDDTIRDGRTLSTFI 365
            +NK + ALS+  EM+ +   PS+ C+E L+++LC+N +Y   + ++ D  + GR +++FI
Sbjct: 694  VNKVDSALSFFLEMQSNGMVPSVECYEVLIMLLCSNKRYSTAITLITDLEKFGRRVTSFI 753

Query: 366  GNLLLLHSFRAEHLYYYW--VRSRHNTTSFSWEI-GELIRAFSPYITDIPNIEDLEEVIQ 536
            GN+LLLHS +++ LY  W  VR   N TS +  I G++I AF+  +     I++LEEVI+
Sbjct: 754  GNILLLHSLKSDELYDAWLQVREVQNETSLNLLILGQIIGAFAGRLKLSQQIDNLEEVIE 813

Query: 537  QLFPMD 554
            Q FP+D
Sbjct: 814  QCFPLD 819


>gb|AAG51690.1|AC016972_9 hypothetical protein; 66200-63606 [Arabidopsis thaliana]
          Length = 864

 Score =  140 bits (354), Expect = 1e-31
 Identities = 73/185 (39%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
 Frame = +3

Query: 6    VYDKMSDSNITPDVKTNTHMLLCYLKSERTASALKFFNELKGERKAGKKLCQCLIIGLCR 185
            VYD M    ITP V +N  ML  YLK+E+ A AL FF++L+ + K  K+L Q +I+GLC+
Sbjct: 610  VYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCK 669

Query: 186  MNKAEMALSYVKEMKRDNETPSLRCFEELVLVLCNNSKYDEVVHVVDDTIRDGRTLSTFI 365
             NK + A+ +++EMK +   PS+ C+E  +  LCN  KYDE V +V++  + GR ++ FI
Sbjct: 670  ANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFI 729

Query: 366  GNLLLLHSFRAEHLYYYWVRSRH--NTTSFSWEIGELIRAFSPYITDIPNIEDLEEVIQQ 539
            GN+LL ++ +++ +Y  W R R+  +       +GELI  FS  I     ++ L+EVI++
Sbjct: 730  GNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEK 789

Query: 540  LFPMD 554
             +P+D
Sbjct: 790  CYPLD 794


>ref|NP_177277.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75151609|sp|Q8GZA6.1|PP113_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g71210 gi|26449321|dbj|BAC41788.1| unknown protein
            [Arabidopsis thaliana] gi|29029058|gb|AAO64908.1|
            At1g71210 [Arabidopsis thaliana]
            gi|332197052|gb|AEE35173.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 879

 Score =  140 bits (354), Expect = 1e-31
 Identities = 73/185 (39%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
 Frame = +3

Query: 6    VYDKMSDSNITPDVKTNTHMLLCYLKSERTASALKFFNELKGERKAGKKLCQCLIIGLCR 185
            VYD M    ITP V +N  ML  YLK+E+ A AL FF++L+ + K  K+L Q +I+GLC+
Sbjct: 625  VYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCK 684

Query: 186  MNKAEMALSYVKEMKRDNETPSLRCFEELVLVLCNNSKYDEVVHVVDDTIRDGRTLSTFI 365
             NK + A+ +++EMK +   PS+ C+E  +  LCN  KYDE V +V++  + GR ++ FI
Sbjct: 685  ANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFI 744

Query: 366  GNLLLLHSFRAEHLYYYWVRSRH--NTTSFSWEIGELIRAFSPYITDIPNIEDLEEVIQQ 539
            GN+LL ++ +++ +Y  W R R+  +       +GELI  FS  I     ++ L+EVI++
Sbjct: 745  GNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEK 804

Query: 540  LFPMD 554
             +P+D
Sbjct: 805  CYPLD 809