BLASTX nr result

ID: Cnidium21_contig00040100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040100
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001176850.1| Os12g0228500 [Oryza sativa Japonica Group] g...   114   2e-23
gb|EEE52834.1| hypothetical protein OsJ_35363 [Oryza sativa Japo...   112   5e-23
ref|NP_001058142.2| Os06g0635500 [Oryza sativa Japonica Group] g...   108   7e-22
ref|XP_002462157.1| hypothetical protein SORBIDRAFT_02g020763 [S...   106   3e-21
ref|XP_002448900.1| hypothetical protein SORBIDRAFT_05g001130 [S...   105   6e-21

>ref|NP_001176850.1| Os12g0228500 [Oryza sativa Japonica Group]
           gi|255670162|dbj|BAH95578.1| Os12g0228500 [Oryza sativa
           Japonica Group]
          Length = 177

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/120 (46%), Positives = 81/120 (67%), Gaps = 8/120 (6%)
 Frame = -2

Query: 429 SELCSQ-SSHQDPA-------KQRKGRSKNFTMEEDMLQISSWLNISLDPVQGTNQTQMT 274
           SE+ SQ    Q+P        +  + RSKNF++EED L +S+W+N+S DPVQGT+Q+  T
Sbjct: 30  SEMGSQYDDEQEPVVNENVAVRPNQKRSKNFSLEEDNLLVSAWINVSFDPVQGTDQSHGT 89

Query: 273 YWSRIWTYFNEQKTFESDRTPTSLCNRWSAIQTAVSKFVGYYNQINGKNASGLTEKNKVI 94
           YW RI  YF++ K FESDR+ +SL +RWS IQ  V+K+ G+ +QI  +N SG+  ++ VI
Sbjct: 90  YWGRIHDYFHQNKEFESDRSQSSLVHRWSTIQEHVNKYCGFLSQIQNRNQSGVNHEDMVI 149


>gb|EEE52834.1| hypothetical protein OsJ_35363 [Oryza sativa Japonica Group]
          Length = 1256

 Score =  112 bits (280), Expect = 5e-23
 Identities = 54/122 (44%), Positives = 83/122 (68%), Gaps = 8/122 (6%)
 Frame = -2

Query: 429 SELCSQ-SSHQDPA-------KQRKGRSKNFTMEEDMLQISSWLNISLDPVQGTNQTQMT 274
           SE+ SQ    Q+P        +  + RSKNF++EED L +S+W+N+S DPVQGT+Q+  T
Sbjct: 62  SEMGSQYDDEQEPVVNENVAVRPNQKRSKNFSLEEDNLLVSAWINVSFDPVQGTDQSHGT 121

Query: 273 YWSRIWTYFNEQKTFESDRTPTSLCNRWSAIQTAVSKFVGYYNQINGKNASGLTEKNKVI 94
           YW RI  YF++ K FESDR+ +SL +RWS IQ  V+K+ G+ +QI  +N SG+  ++ ++
Sbjct: 122 YWGRIHDYFHQNKEFESDRSQSSLVHRWSTIQEHVNKYCGFLSQIQNRNQSGVNHEDMLM 181

Query: 93  LV 88
           ++
Sbjct: 182 VM 183


>ref|NP_001058142.2| Os06g0635500 [Oryza sativa Japonica Group]
           gi|51535904|dbj|BAD37987.1| NAM-like protein [Oryza
           sativa Japonica Group] gi|125597958|gb|EAZ37738.1|
           hypothetical protein OsJ_22078 [Oryza sativa Japonica
           Group] gi|255677255|dbj|BAF20056.2| Os06g0635500 [Oryza
           sativa Japonica Group]
          Length = 376

 Score =  108 bits (270), Expect = 7e-22
 Identities = 50/99 (50%), Positives = 71/99 (71%)
 Frame = -2

Query: 393 AKQRKGRSKNFTMEEDMLQISSWLNISLDPVQGTNQTQMTYWSRIWTYFNEQKTFESDRT 214
           AK  +GR+KNFT +ED+L +S+WLN+ +DP+QG +Q+Q TYW+RI  YF+  K FES R+
Sbjct: 102 AKISQGRTKNFTTQEDILLVSAWLNVGMDPIQGVDQSQGTYWARIHEYFHANKEFESTRS 161

Query: 213 PTSLCNRWSAIQTAVSKFVGYYNQINGKNASGLTEKNKV 97
            +SL NRWSAIQ  V+ F G  ++I  +N SG    +K+
Sbjct: 162 ESSLLNRWSAIQHDVNIFCGCMSRIEARNQSGSRVDDKI 200


>ref|XP_002462157.1| hypothetical protein SORBIDRAFT_02g020763 [Sorghum bicolor]
           gi|242093256|ref|XP_002437118.1| hypothetical protein
           SORBIDRAFT_10g021355 [Sorghum bicolor]
           gi|241915341|gb|EER88485.1| hypothetical protein
           SORBIDRAFT_10g021355 [Sorghum bicolor]
           gi|241925534|gb|EER98678.1| hypothetical protein
           SORBIDRAFT_02g020763 [Sorghum bicolor]
          Length = 270

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/97 (51%), Positives = 65/97 (67%)
 Frame = -2

Query: 390 KQRKGRSKNFTMEEDMLQISSWLNISLDPVQGTNQTQMTYWSRIWTYFNEQKTFESDRTP 211
           K    R+KNFT+EED   + SWLN+SLDPV+G +Q + TYW RI  +F+  K F SDRT 
Sbjct: 2   KANMKRTKNFTIEEDEQLVKSWLNVSLDPVKGVDQARTTYWKRIHAHFHAHKDFSSDRTQ 61

Query: 210 TSLCNRWSAIQTAVSKFVGYYNQINGKNASGLTEKNK 100
            SL NRWS IQ  V+ F GY ++I  +N SG+T  +K
Sbjct: 62  GSLVNRWSGIQHDVNLFAGYLSKIENRNQSGMTIDDK 98


>ref|XP_002448900.1| hypothetical protein SORBIDRAFT_05g001130 [Sorghum bicolor]
           gi|241934743|gb|EES07888.1| hypothetical protein
           SORBIDRAFT_05g001130 [Sorghum bicolor]
          Length = 413

 Score =  105 bits (262), Expect = 6e-21
 Identities = 50/111 (45%), Positives = 73/111 (65%)
 Frame = -2

Query: 432 PSELCSQSSHQDPAKQRKGRSKNFTMEEDMLQISSWLNISLDPVQGTNQTQMTYWSRIWT 253
           P+E+ +        K    RSKNF+ EED L +S+WLN+SLDPV G +Q++ TYW RI+ 
Sbjct: 107 PNEMPACVEVPASVKANPKRSKNFSKEEDKLLVSAWLNVSLDPVHGVDQSRSTYWKRIYE 166

Query: 252 YFNEQKTFESDRTPTSLCNRWSAIQTAVSKFVGYYNQINGKNASGLTEKNK 100
           +F+  KTFESDRT +SL +RWS IQ   + + G  ++I  +N SG++  +K
Sbjct: 167 FFHTNKTFESDRTQSSLMSRWSGIQHDCNSYAGCVSKIETRNQSGVSIADK 217


Top