BLASTX nr result

ID: Cnidium21_contig00040073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040073
         (834 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...   157   3e-36
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   156   6e-36
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...   150   4e-34
ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...   150   4e-34
ref|XP_003637499.1| F-box protein [Medicago truncatula] gi|35550...   149   6e-34

>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score =  157 bits (397), Expect = 3e-36
 Identities = 100/284 (35%), Positives = 153/284 (53%), Gaps = 6/284 (2%)
 Frame = -1

Query: 834 WNPATRKCRELPIAPIDFVCPYD--IDPSFIRGFGYDAVNDDYKVLRILYPVG--SDLAG 667
           WNP+ R+ R LP  P+      D  +  + + GFG+D    DYK++RI Y V        
Sbjct: 113 WNPSLRQHRILPYLPVPRRRHPDTTLFAARVCGFGFDHKTRDYKLVRISYFVDLHDRSFD 172

Query: 666 SKVIVYSLKTNSWRRLQSISSHFRLITNCGMFVGGALHWITIKTLGLKSCLSILAFDLAV 487
           S+V +Y+L+ N+W+ L S+          G+FVG +LHW+  + L       I+AFDL  
Sbjct: 173 SQVKLYTLRANAWKTLPSLPYALCCARTMGVFVGNSLHWVVTRKLEPDQPDLIIAFDLTH 232

Query: 486 ENYREVPLPNVRNQNPD-ELTLCIFAESLCVLIIDPFVSIDVWLMNEYGVGNSWCKLFSL 310
           + +RE+PLP+    +   E+ L +   SLC+ +      IDVW+M EY   +SWCK+F+L
Sbjct: 233 DIFRELPLPDTGGVDGGFEIDLALLGGSLCMTVNFHKTRIDVWVMREYNRRDSWCKVFTL 292

Query: 309 EHPQVVRS-KYVRPVAYSKSLRDVLLEVGDEKVMWYNLERKNIRAVKIANMPDVFHDLEV 133
           E  + +RS K VRP+ YS     VLLE   +++ WY+LE+K +  VKI  +P++ ++  +
Sbjct: 293 EESREMRSLKCVRPLGYSSDGNKVLLEHDRKRLFWYDLEKKEVALVKIQGLPNL-NEAMI 351

Query: 132 YTESLVPPDYIFSFDGXXXXXXXXXXXXXKRNERDRFLSKGFKL 1
              +LVPP ++                   R  RD FLS+GFKL
Sbjct: 352 CLGTLVPPYFL---PRQICRKPRALGCERPRKTRDDFLSQGFKL 392


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  156 bits (394), Expect = 6e-36
 Identities = 103/283 (36%), Positives = 152/283 (53%), Gaps = 5/283 (1%)
 Frame = -1

Query: 834 WNPATRKCRELPIAPIDFVCPYDIDPS--FIRGFGYDAVNDDYKVLRILYPVGSDLAG-- 667
           WNP+TRK R +P  PI+    +       ++ GFGYD+V DDYK++RI    G       
Sbjct: 118 WNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFE 177

Query: 666 SKVIVYSLKTNSWRRLQSISSHFRLITNCGMFVGGALHWITIKTLGLKSCLSILAFDLAV 487
           S+V VYSL+  SWRR+  +          G+F  GALHW+  +         ++A DL V
Sbjct: 178 SEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGV 237

Query: 486 ENYREVPLPNVRNQNPDELTLCIFAESLCVLIIDPFVSIDVWLMNEYGVGNSWCKLFSLE 307
           E+YREV  P  +++N   + L +    LC L       +DVW+M EYGV  SW KLFS+ 
Sbjct: 238 EDYREVLQPEYKDKN-FYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFSVA 296

Query: 306 HPQVVR-SKYVRPVAYSKSLRDVLLEVGDEKVMWYNLERKNIRAVKIANMPDVFHDLEVY 130
             +V+   + ++P+AYSKS  +VL+E  +  + WY+L+RK ++  +I  +P  F + + +
Sbjct: 297 QYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN-RIPGIPYSF-EADTF 354

Query: 129 TESLVPPDYIFSFDGXXXXXXXXXXXXXKRNERDRFLSKGFKL 1
            ESL+        DG              RN+RD FLS+GFKL
Sbjct: 355 VESLISVSPNRHLDG---RTQDDDEDSKDRNKRDDFLSEGFKL 394


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score =  150 bits (378), Expect = 4e-34
 Identities = 97/287 (33%), Positives = 153/287 (53%), Gaps = 9/287 (3%)
 Frame = -1

Query: 834 WNPATRKCRELPIAPIDFVCPYDIDPSF---IRGFGYDAVNDDYKVLRILYPVGSDLAG- 667
           WNP+ R+ R LP  P+     +     F   + GFG+D  + DYK++RI Y V  DL   
Sbjct: 113 WNPSLRQHRILPSLPLPRRRLHPDTTLFAARVYGFGFDHTSPDYKLVRISYFV--DLQDR 170

Query: 666 ---SKVIVYSLKTNSWRRLQSISSHFRLITNCGMFVGGALHWITIKTLGLKSCLSILAFD 496
              S+V +Y+L+ N+W+ L S+          G+FVG +LHW+  + L       I+AFD
Sbjct: 171 SFDSQVKLYTLRANAWKTLPSMPYALCCARTMGVFVGNSLHWVVTRKLEPDQPDLIVAFD 230

Query: 495 LAVENYREVPLPNVRNQNPD-ELTLCIFAESLCVLIIDPFVSIDVWLMNEYGVGNSWCKL 319
           L  E + E+PLP+        E+ + +  +SLC+ +      +DVW+M EY  G+SWCKL
Sbjct: 231 LTHEIFTELPLPDTGGVGGGFEIDVALLGDSLCMTVNFHNSKMDVWVMREYNRGDSWCKL 290

Query: 318 FSLEHPQVVRS-KYVRPVAYSKSLRDVLLEVGDEKVMWYNLERKNIRAVKIANMPDVFHD 142
           F+LE  + +RS K +RP+ YS     VLLE   +++ WY+L +K +  V+I  +P++ ++
Sbjct: 291 FTLEESRELRSFKCLRPLGYSSDGNKVLLEHDRKRLCWYDLGKKEVTLVRIQGLPNL-NE 349

Query: 141 LEVYTESLVPPDYIFSFDGXXXXXXXXXXXXXKRNERDRFLSKGFKL 1
             +   +LV P ++                   +  RD FLS+GFKL
Sbjct: 350 AMICLGTLVTPYFL------PRQICRKSPTLGCQRRRDDFLSQGFKL 390


>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score =  150 bits (378), Expect = 4e-34
 Identities = 102/286 (35%), Positives = 153/286 (53%), Gaps = 9/286 (3%)
 Frame = -1

Query: 831 NPATRKCRELPIAPIDF-VCPYDIDPSFIRGFGYDAVNDDYKVLRILYPVGSDLAG--SK 661
           NP+TRK + LP   +D  V    +  ++  GFG D+V+DDYKV+R+   +   L    + 
Sbjct: 119 NPSTRKHKVLPFLRMDASVKGKSVWGAWAFGFGCDSVHDDYKVIRLGQYLDFSLQQFETD 178

Query: 660 VIVYSLKTNSWRRLQSISSHFRLITNCGMFVGGALHWITIKTLGLKSCLSILAFDLAVEN 481
            +VYSLK+NSWR++  +S         G+ VG ALHW+  +   L +   I+A +L VE+
Sbjct: 179 TMVYSLKSNSWRKIDGMSCIIGFDQKMGVLVGEALHWLASRDRILLNPDVIVALNLGVED 238

Query: 480 YREVPLPNV------RNQNPDELTLCIFAESLCVLIIDPFVSIDVWLMNEYGVGNSWCKL 319
           +REVP P+V       NQNP  L L +  E L V  I     +D+W+M EYG  +SW +L
Sbjct: 239 FREVPGPDVVVVGANPNQNPS-LNLGVVEEWLSVFAIYNNTRLDIWVMKEYGAKDSWTRL 297

Query: 318 FSLEHPQVVRSKYVRPVAYSKSLRDVLLEVGDEKVMWYNLERKNIRAVKIANMPDVFHDL 139
           FS     V   K +R + +SK+  +VLL + D+ ++WY +  K ++ V+I  +  +F  +
Sbjct: 298 FSFTPNVVPFVKCLRTLVFSKNRDEVLLGLQDKNLLWYKIREKRVKRVEIHIVVTLF-TM 356

Query: 138 EVYTESLVPPDYIFSFDGXXXXXXXXXXXXXKRNERDRFLSKGFKL 1
           +V+  SLVP       D               +  RD FLSKGFKL
Sbjct: 357 QVFHGSLVPLSVNKETDS------KKARPRKGKKNRDEFLSKGFKL 396


>ref|XP_003637499.1| F-box protein [Medicago truncatula] gi|355503434|gb|AES84637.1|
           F-box protein [Medicago truncatula]
          Length = 380

 Score =  149 bits (377), Expect = 6e-34
 Identities = 101/287 (35%), Positives = 145/287 (50%), Gaps = 9/287 (3%)
 Frame = -1

Query: 834 WNPATRKCRELPIAPIDFVCPYDIDPSF---IRGFGYDAVNDDYKVLRILYPVGSDLA-- 670
           WNP  RK + +P  PI    P   +  F   + GFG+D +N DYK+LRI   V    +  
Sbjct: 108 WNPNIRKHQNIPNLPISIPPPRSGNVHFLSCVHGFGFDPLNVDYKLLRISCIVDPQYSTS 167

Query: 669 GSKVIVYSLKTNSWRRLQSISSHFRLITNCGMFVGGALHWITIKTLGLKSCLSILAFDLA 490
            S V ++S K NSW+ L S+          G+FV  +LHWI  + LG      I+AF+L 
Sbjct: 168 DSHVRLFSSKMNSWKDLPSMPYALSYPRTEGVFVENSLHWIMTRKLGQLQSRVIVAFNLT 227

Query: 489 VENYREVPLPNVR---NQNPDELTLCIFAESLCVLIIDPFVSIDVWLMNEYGVGNSWCKL 319
            E + EVP P +    N    E+ + +    LC+++    V IDVW+M EYG  +SWC+L
Sbjct: 228 HEIFNEVPFPEIGEEVNSESFEIGVAVLEGCLCMIVNYQTVKIDVWVMKEYGCRDSWCEL 287

Query: 318 FSL-EHPQVVRSKYVRPVAYSKSLRDVLLEVGDEKVMWYNLERKNIRAVKIANMPDVFHD 142
           F+L E   ++  K + P+AYS     VLLEV  EK+ WY+L+ + +  V+   +P+ F  
Sbjct: 288 FTLAESCFILPLKTLWPLAYSSDGSMVLLEVDCEKLFWYDLKSEQVSCVE--GIPN-FDQ 344

Query: 141 LEVYTESLVPPDYIFSFDGXXXXXXXXXXXXXKRNERDRFLSKGFKL 1
             +   SLVPP +                       RD FLS+GFKL
Sbjct: 345 AMICVGSLVPPSF-------------PRKENYTSKRRDDFLSRGFKL 378


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