BLASTX nr result

ID: Cnidium21_contig00040071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040071
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553268.1| PREDICTED: putative ribonuclease H protein A...    80   1e-13
ref|XP_003521972.1| PREDICTED: uncharacterized protein LOC100800...    80   1e-13
emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]    79   3e-13
ref|XP_003541643.1| PREDICTED: uncharacterized protein LOC100817...    79   4e-13
emb|CAN68348.1| hypothetical protein VITISV_032025 [Vitis vinifera]    79   4e-13

>ref|XP_003553268.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 625

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
 Frame = -3

Query: 340 LKWERVCKPKSKGGLGLVPLKWRNISLLGKWWWRCYSERNKDWNIILSQRYGKNLHYNMN 161
           + W+ VC PKSKGGLG+  L   N +LLGKW W   +  N+ W  +L  +YG       N
Sbjct: 246 VNWDTVCLPKSKGGLGIKDLTKFNEALLGKWGWELANNHNQLWARVLLSKYG-----GWN 300

Query: 160 GL---RNESGISNILDSVSKIGNEPMASNLFNDLSFKWKVGQGNLIYFWEDNWHEG 2
            L   R+ +  S     +  +  +  +++L N  +F+WKVG G+ + FW+D W EG
Sbjct: 301 TLCSGRDNAHFSQWWKDLRSVFQQHHSNSLIN--NFRWKVGDGSRLNFWKDKWREG 354


>ref|XP_003521972.1| PREDICTED: uncharacterized protein LOC100800774 [Glycine max]
          Length = 684

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
 Frame = -3

Query: 340 LKWERVCKPKSKGGLGLVPLKWRNISLLGKWWWRCYSERNKDWNIILSQRYGKNLHYNMN 161
           + W+ VC PKSKGGLG+  L   N +LLGKW W   +  N+ W  +L  +YG       N
Sbjct: 246 VNWDTVCLPKSKGGLGIKDLTKFNEALLGKWGWELANNHNQLWARVLLSKYG-----GWN 300

Query: 160 GL---RNESGISNILDSVSKIGNEPMASNLFNDLSFKWKVGQGNLIYFWEDNWHEG 2
            L   R+ +  S     +  +  +  +++L N  +F+WKVG G+ + FW+D W EG
Sbjct: 301 TLCSGRDSAHFSQWWKDLRSVFQQHHSNSLIN--NFRWKVGDGSRLKFWKDKWREG 354


>emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]
          Length = 1030

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
 Frame = -3

Query: 364 NSPSKMHLLKWERVCKPKSKGGLGLVPLKWRNISLLGKWWWRCYSERNKDWNIILSQRYG 185
           N  +K+HL+KWE VC  K KGGLGL  L W N +LLGKW WR    + + W  +L  +YG
Sbjct: 653 NGGNKVHLIKWEVVCADKEKGGLGLRKLIWLNKALLGKWIWRFARAKEELWKKVLEAKYG 712

Query: 184 -KNLHYNMNGLRNESGISNILDSVSKIGNEPMASNLFNDLSFKWKVGQGNLIYFWEDNW 11
            + L +     R  +G+  +      +  E M  + +   +  +KVG+GN + FW D W
Sbjct: 713 QEELGWR---TRKANGVFGV-----GVWKEIMKESTWCWENMVFKVGKGNKVRFWIDPW 763


>ref|XP_003541643.1| PREDICTED: uncharacterized protein LOC100817727 [Glycine max]
          Length = 1869

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
 Frame = -3

Query: 364 NSPSKMHLLKWERVCKPKSKGGLGLVPLKWRNISLLGKWWWRCYSERNKDWNIILSQRYG 185
           N  +K+  + W+ VC PK+KGGLG+  L   N +LL KW W   + +N  W   L  +YG
Sbjct: 128 NEATKIPWVNWDTVCLPKTKGGLGIKDLTKFNEALLSKWGWELANNQNHLWARTLMSKYG 187

Query: 184 KNLHYNMNGL---RNESGISNILDSVSKIGNEPMASNLFNDLSFKWKVGQGNLIYFWEDN 14
                  N L   RN +G SN    +  I  +  +++L ++L  +WK+G G  I FW+D 
Sbjct: 188 -----GWNALIHGRNCTGFSNWWKDLKSIFQQQHSNSLTSNL--RWKMGNGAKIKFWKDQ 240

Query: 13  WHE 5
           W E
Sbjct: 241 WRE 243


>emb|CAN68348.1| hypothetical protein VITISV_032025 [Vitis vinifera]
          Length = 1670

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/118 (36%), Positives = 63/118 (53%)
 Frame = -3

Query: 364  NSPSKMHLLKWERVCKPKSKGGLGLVPLKWRNISLLGKWWWRCYSERNKDWNIILSQRYG 185
            N  +K HL+KWE VC  K KGGLGL  L W N +LLGKW WR    + + W  +L  +YG
Sbjct: 1384 NGGNKAHLVKWEVVCADKEKGGLGLRKLIWLNKALLGKWIWRFARAKEELWKKVLEAKYG 1443

Query: 184  KNLHYNMNGLRNESGISNILDSVSKIGNEPMASNLFNDLSFKWKVGQGNLIYFWEDNW 11
            +   +     R  +G+  +     ++  E +  + +   +  +KVG+GN I FW D W
Sbjct: 1444 QE-EFGWR-TRKANGVFGV-----RVWKEILKESTWCWENMVFKVGKGNKIRFWIDPW 1494


Top