BLASTX nr result
ID: Cnidium21_contig00040001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00040001
(685 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22283.3| unnamed protein product [Vitis vinifera] 328 8e-88
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 328 8e-88
ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2... 313 2e-83
ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containi... 284 1e-74
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi... 280 2e-73
>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 328 bits (840), Expect = 8e-88
Identities = 151/227 (66%), Positives = 190/227 (83%)
Frame = +1
Query: 4 QTERIWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAII 183
QTERIWR +K+NG GT VTYRLLV +FVRC QNELA+DAY EMIQN ++ +D M+AII
Sbjct: 306 QTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMKAII 365
Query: 184 GACSKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGHV 363
GAC+KEG+WD+ALSVF MLN G+KPN +ACNALINS+GK+ LA VY +MKSLGH
Sbjct: 366 GACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSLGHT 425
Query: 364 PDAYTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRALQ 543
PD YTWNA+LGALYRA++HAD L LF++++ Q+S+++LH+YNTALMSC++LG W+RALQ
Sbjct: 426 PDVYTWNALLGALYRANQHADALHLFESIR-EQSSQVNLHLYNTALMSCQKLGLWNRALQ 484
Query: 544 LLWQLESSGLPISTVSYNLAIGTCEVARRPQMALQVYERMLHQHHTP 684
LLWQ+E+SGL +S+ SYNL IG CEVAR+P++ALQVYE M+ Q TP
Sbjct: 485 LLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTP 531
Score = 62.8 bits (151), Expect = 6e-08
Identities = 43/187 (22%), Positives = 82/187 (43%)
Frame = +1
Query: 13 RIWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAIIGAC 192
R++ +K GH T+ L+ R +Q+ AL + + + S + + + +C
Sbjct: 414 RVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFESIREQSSQVNLHLYNTALMSC 473
Query: 193 SKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGHVPDA 372
K G W+ AL + QM G+ ++ + N +I + A K +AL+VY M PD
Sbjct: 474 QKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDT 533
Query: 373 YTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRALQLLW 552
+T +++ + A+V + + + +YN A+ G + A +L
Sbjct: 534 FTHLSLIRSCIWGSLWAEVKEIL------NRAGTDVSLYNAAIQGMCLRGKIESAKKLYM 587
Query: 553 QLESSGL 573
++ SGL
Sbjct: 588 RMRKSGL 594
Score = 56.6 bits (135), Expect = 4e-06
Identities = 36/180 (20%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Frame = +1
Query: 151 ESTDDVMQAIIGACSKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALE 330
E + ++ I S+ + L ++ M G++P++ ACN+L++ L + + AL
Sbjct: 178 ERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALR 237
Query: 331 VYGIMKSLGHVPDAYTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHM--YNTALM 504
V+ MK+ ++++ +L A+ + L++F L+ K + Y T +
Sbjct: 238 VFESMKA-NESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMIS 296
Query: 505 SCKRLGSWDRALQLLWQLESSGLPISTVSYNLAIGTCEVARRPQMALQVYERMLHQHHTP 684
C ++ +W + ++ ++ +GL + V+Y L + + ++A+ Y M+ P
Sbjct: 297 ICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKP 356
>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Vitis vinifera]
Length = 546
Score = 328 bits (840), Expect = 8e-88
Identities = 151/227 (66%), Positives = 190/227 (83%)
Frame = +1
Query: 4 QTERIWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAII 183
QTERIWR +K+NG GT VTYRLLV +FVRC QNELA+DAY EMIQN ++ +D M+AII
Sbjct: 226 QTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGEDAMKAII 285
Query: 184 GACSKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGHV 363
GAC+KEG+WD+ALSVF MLN G+KPN +ACNALINS+GK+ LA VY +MKSLGH
Sbjct: 286 GACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDVMKSLGHT 345
Query: 364 PDAYTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRALQ 543
PD YTWNA+LGALYRA++HAD L LF++++ Q+S+++LH+YNTALMSC++LG W+RALQ
Sbjct: 346 PDVYTWNALLGALYRANQHADALHLFESIR-EQSSQVNLHLYNTALMSCQKLGLWNRALQ 404
Query: 544 LLWQLESSGLPISTVSYNLAIGTCEVARRPQMALQVYERMLHQHHTP 684
LLWQ+E+SGL +S+ SYNL IG CEVAR+P++ALQVYE M+ Q TP
Sbjct: 405 LLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTP 451
Score = 62.8 bits (151), Expect = 6e-08
Identities = 43/187 (22%), Positives = 82/187 (43%)
Frame = +1
Query: 13 RIWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAIIGAC 192
R++ +K GH T+ L+ R +Q+ AL + + + S + + + +C
Sbjct: 334 RVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFESIREQSSQVNLHLYNTALMSC 393
Query: 193 SKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGHVPDA 372
K G W+ AL + QM G+ ++ + N +I + A K +AL+VY M PD
Sbjct: 394 QKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQCTPDT 453
Query: 373 YTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRALQLLW 552
+T +++ + A+V + + + +YN A+ G + A +L
Sbjct: 454 FTHLSLIRSCIWGSLWAEVKEIL------NRAGTDVSLYNAAIQGMCLRGKIESAKKLYM 507
Query: 553 QLESSGL 573
++ SGL
Sbjct: 508 RMRKSGL 514
Score = 56.6 bits (135), Expect = 4e-06
Identities = 36/180 (20%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Frame = +1
Query: 151 ESTDDVMQAIIGACSKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALE 330
E + ++ I S+ + L ++ M G++P++ ACN+L++ L + + AL
Sbjct: 98 ERNEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALR 157
Query: 331 VYGIMKSLGHVPDAYTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHM--YNTALM 504
V+ MK+ ++++ +L A+ + L++F L+ K + Y T +
Sbjct: 158 VFESMKA-NESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMIS 216
Query: 505 SCKRLGSWDRALQLLWQLESSGLPISTVSYNLAIGTCEVARRPQMALQVYERMLHQHHTP 684
C ++ +W + ++ ++ +GL + V+Y L + + ++A+ Y M+ P
Sbjct: 217 ICGKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKP 276
>ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1|
predicted protein [Populus trichocarpa]
Length = 487
Score = 313 bits (802), Expect = 2e-83
Identities = 142/228 (62%), Positives = 184/228 (80%)
Frame = +1
Query: 1 VQTERIWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAI 180
V+TERIWR +K+N + GT VTY LLV IFVRC +NELAL+AY EM+QN ++ +D + A+
Sbjct: 171 VETERIWRSMKENDYHGTQVTYSLLVSIFVRCGRNELALEAYSEMVQNGLKPREDTLHAV 230
Query: 181 IGACSKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGH 360
IGACSK+G WD+AL++F ML+ G+KPN +ACNALIN LGKA + LA +V+ I+KSLGH
Sbjct: 231 IGACSKKGNWDLALNIFQNMLDHGLKPNLIACNALINLLGKAGEIKLAFKVFKILKSLGH 290
Query: 361 VPDAYTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRAL 540
PD YTWNA+L LYRA++H D L+LF+ L+ QNS ++ H+YNTALMSC++LG WDRAL
Sbjct: 291 TPDEYTWNALLSGLYRANQHVDALQLFERLKREQNSLLNEHLYNTALMSCQKLGLWDRAL 350
Query: 541 QLLWQLESSGLPISTVSYNLAIGTCEVARRPQMALQVYERMLHQHHTP 684
QL+WQ E+SGL +ST SYNLAIG CEVAR+P++AL+VYE M+HQ P
Sbjct: 351 QLVWQAEASGLSVSTASYNLAIGACEVARKPEVALEVYEHMVHQKCPP 398
Score = 55.5 bits (132), Expect = 1e-05
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 2/189 (1%)
Frame = +1
Query: 13 RIWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMI--QNSVESTDDVMQAIIG 186
++++ LK GH T+ L+ R +Q+ AL + + QNS+ + + + +
Sbjct: 280 KVFKILKSLGHTPDEYTWNALLSGLYRANQHVDALQLFERLKREQNSLLN-EHLYNTALM 338
Query: 187 ACSKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGHVP 366
+C K G WD AL + Q G+ + + N I + A K +ALEVY M P
Sbjct: 339 SCQKLGLWDRALQLVWQAEASGLSVSTASYNLAIGACEVARKPEVALEVYEHMVHQKCPP 398
Query: 367 DAYTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRALQL 546
D +T+ +++ + A +V + + + +YN + G + A +L
Sbjct: 399 DTFTYLSLIRSCIWASLWDEVEEILDQVAP------DVSLYNAVIHGMCLRGKTESAKKL 452
Query: 547 LWQLESSGL 573
++ SGL
Sbjct: 453 YMKMGKSGL 461
>ref|XP_004141597.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Cucumis sativus]
Length = 600
Score = 284 bits (727), Expect = 1e-74
Identities = 130/228 (57%), Positives = 178/228 (78%)
Frame = +1
Query: 1 VQTERIWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAI 180
V+ ER WR ++ NG + T +TY LLV FVRC+QNELA+D Y +M+QNS + +D MQAI
Sbjct: 272 VEAERTWRLMEKNGCSATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAI 331
Query: 181 IGACSKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGH 360
IGA SKEG+WD AL VF ML G++PN+V+ NALIN+LGKA + LA VY +MKS+GH
Sbjct: 332 IGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGH 391
Query: 361 VPDAYTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRAL 540
PD YTWNA+LGALY+A+ ++D + LF+ ++ + ++++H+YNT LMSC +LG W+RA+
Sbjct: 392 SPDVYTWNALLGALYKANRYSDAIHLFEFVK-REKVQLNIHIYNTILMSCSKLGLWERAV 450
Query: 541 QLLWQLESSGLPISTVSYNLAIGTCEVARRPQMALQVYERMLHQHHTP 684
Q+LW++E SGL IST SYN+ + CE+AR+P++ALQVYERM+HQ HTP
Sbjct: 451 QILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTP 498
Score = 60.1 bits (144), Expect = 4e-07
Identities = 49/229 (21%), Positives = 97/229 (42%), Gaps = 8/229 (3%)
Frame = +1
Query: 16 IWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAIIGACS 195
++ +K GH+ T+ L+ + ++ A+ + + + V+ + I+ +CS
Sbjct: 382 VYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQLNIHIYNTILMSCS 441
Query: 196 KEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGHVPDAY 375
K G W+ A+ + +M G+ + + N ++ + A K +AL+VY M H PD +
Sbjct: 442 KLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKHTPDTF 501
Query: 376 TWNAIL-----GALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRAL 540
T +++ G+L+ D + L N A S +YN + G D A
Sbjct: 502 THLSLIRCCIWGSLW------DEVELLLNKSAPDVS-----VYNVVIQGMCLRGKSDLAK 550
Query: 541 QLLWQLESSGLPISTVSYNLAIGTC---EVARRPQMALQVYERMLHQHH 678
+L ++ +G+ + L + R+ + A +R H HH
Sbjct: 551 KLYTKMRENGIQPDGKTRALMLQNLPKDPARRKNRWASGFKKRQRHYHH 599
>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29290-like [Cucumis sativus]
Length = 600
Score = 280 bits (715), Expect = 2e-73
Identities = 129/228 (56%), Positives = 176/228 (77%)
Frame = +1
Query: 1 VQTERIWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAI 180
V+ ER WR ++ NG T +TY LLV FVRC+QNELA+D Y +M+QNS + +D MQAI
Sbjct: 272 VEAERTWRLMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTMQAI 331
Query: 181 IGACSKEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGH 360
IGA SKEG+WD AL VF ML G++PN+V+ NALIN+LGKA + LA VY +MKS+GH
Sbjct: 332 IGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKSMGH 391
Query: 361 VPDAYTWNAILGALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRAL 540
PD YTWNA+LGALY+A+ ++D + LF+ ++ + ++++H+YNT LMSC +LG W+RA+
Sbjct: 392 SPDVYTWNALLGALYKANRYSDAIHLFEFVK-REKVQLNIHIYNTILMSCSKLGLWERAV 450
Query: 541 QLLWQLESSGLPISTVSYNLAIGTCEVARRPQMALQVYERMLHQHHTP 684
Q+LW++E SGL IST SYN+ + CE+AR+P++ALQVYERM+HQ TP
Sbjct: 451 QILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTP 498
Score = 55.8 bits (133), Expect = 8e-06
Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 8/229 (3%)
Frame = +1
Query: 16 IWRYLKDNGHAGTTVTYRLLVCIFVRCSQNELALDAYREMIQNSVESTDDVMQAIIGACS 195
++ +K GH+ T+ L+ + ++ A+ + + + V+ + I+ +CS
Sbjct: 382 VYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQLNIHIYNTILMSCS 441
Query: 196 KEGEWDMALSVFHQMLNQGMKPNAVACNALINSLGKANKANLALEVYGIMKSLGHVPDAY 375
K G W+ A+ + +M G+ + + N ++ + A K +AL+VY M PD +
Sbjct: 442 KLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKLTPDTF 501
Query: 376 TWNAIL-----GALYRADEHADVLRLFQNLQAAQNSKISLHMYNTALMSCKRLGSWDRAL 540
T +++ G+L+ D + L N A S +YN + G D A
Sbjct: 502 THLSLIRCCIWGSLW------DEVELLLNKSAPDVS-----VYNVVIQGMCLRGKSDLAK 550
Query: 541 QLLWQLESSGLPISTVSYNLAIGTC---EVARRPQMALQVYERMLHQHH 678
+L ++ +G+ + L + R+ + A +R H HH
Sbjct: 551 KLYTKMRENGIQPDGKTRALMLQNLPKDPARRKNRWASGFKKRQRHYHH 599