BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00040000
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47
ref|XP_002526074.1| pentatricopeptide repeat-containing protein,...   186   2e-45
emb|CBI22283.3| unnamed protein product [Vitis vinifera]              185   3e-45
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi...   185   3e-45
ref|XP_003551785.1| PREDICTED: pentatricopeptide repeat-containi...   165   3e-39

>ref|XP_002323888.1| predicted protein [Populus trichocarpa] gi|222866890|gb|EEF04021.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  191 bits (484), Expect = 7e-47
 Identities = 88/140 (62%), Positives = 117/140 (83%)
 Frame = +2

Query: 2   DEEVLSNRILKLSRSNKVASALSLYRSMEFSALRPNLHACNSLLSCLVRNQVLDEALKIF 181
           DE  LS RIL LSRSNK+ SAL L RSMEFS L+PN HACNSLLSCL+R+++ ++AL++F
Sbjct: 46  DENELSRRILMLSRSNKIRSALQLLRSMEFSGLQPNTHACNSLLSCLIRHELHEDALRVF 105

Query: 182 EFMKESQMTTGHTYSLILKAVANARGCNAALDMCEDLLGGSYIQKEFDAIVYNTMLSICG 361
           E+MK++++TTGH YSLILKAVA+ +GC++ALDM  +L   S  +K+FD IVYNTM+S+CG
Sbjct: 106 EYMKKNEITTGHAYSLILKAVASTKGCDSALDMFTELEAFSREKKDFDVIVYNTMISVCG 165

Query: 362 KTNNWVQTERIWRNLKDNGH 421
           K  NWV+TERIWR++K+N +
Sbjct: 166 KEKNWVETERIWRSMKENDY 185


>ref|XP_002526074.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534571|gb|EEF36268.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 285

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/140 (64%), Positives = 114/140 (81%)
 Frame = +2

Query: 2   DEEVLSNRILKLSRSNKVASALSLYRSMEFSALRPNLHACNSLLSCLVRNQVLDEALKIF 181
           +EE LS RIL LSRSNKV SAL L+RSMEFS LRPN HACNS +SCL+RN++LD AL++F
Sbjct: 89  NEEELSRRILMLSRSNKVRSALELFRSMEFSGLRPNSHACNSFISCLLRNKLLDHALRVF 148

Query: 182 EFMKESQMTTGHTYSLILKAVANARGCNAALDMCEDLLGGSYIQKEFDAIVYNTMLSICG 361
           +FMK ++++TGHT++LILKAVA+ +GC ++L M    LG S  Q +FD IVYNTMLSICG
Sbjct: 149 KFMKRNEISTGHTHTLILKAVADIQGCESSLYMFAK-LGLSSEQNDFDVIVYNTMLSICG 207

Query: 362 KTNNWVQTERIWRNLKDNGH 421
           + NNWV  ERIWR++K+N H
Sbjct: 208 RVNNWVDMERIWRSMKENSH 227


>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  185 bits (470), Expect = 3e-45
 Identities = 86/139 (61%), Positives = 113/139 (81%)
 Frame = +2

Query: 2   DEEVLSNRILKLSRSNKVASALSLYRSMEFSALRPNLHACNSLLSCLVRNQVLDEALKIF 181
           +E++LS RIL LSRSNKV S L LYR+MEFS L+P+ HACNSLLSCL+RN++LD+AL++F
Sbjct: 180 NEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVF 239

Query: 182 EFMKESQMTTGHTYSLILKAVANARGCNAALDMCEDLLGGSYIQKEFDAIVYNTMLSICG 361
           E MK ++ TTGH+YSL+LKA+AN +G ++AL M   L     ++K+FD I Y TM+SICG
Sbjct: 240 ESMKANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICG 299

Query: 362 KTNNWVQTERIWRNLKDNG 418
           K NNW QTERIWR++K+NG
Sbjct: 300 KVNNWAQTERIWRSMKENG 318


>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Vitis vinifera]
          Length = 546

 Score =  185 bits (470), Expect = 3e-45
 Identities = 86/139 (61%), Positives = 113/139 (81%)
 Frame = +2

Query: 2   DEEVLSNRILKLSRSNKVASALSLYRSMEFSALRPNLHACNSLLSCLVRNQVLDEALKIF 181
           +E++LS RIL LSRSNKV S L LYR+MEFS L+P+ HACNSLLSCL+RN++LD+AL++F
Sbjct: 100 NEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVF 159

Query: 182 EFMKESQMTTGHTYSLILKAVANARGCNAALDMCEDLLGGSYIQKEFDAIVYNTMLSICG 361
           E MK ++ TTGH+YSL+LKA+AN +G ++AL M   L     ++K+FD I Y TM+SICG
Sbjct: 160 ESMKANESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISICG 219

Query: 362 KTNNWVQTERIWRNLKDNG 418
           K NNW QTERIWR++K+NG
Sbjct: 220 KVNNWAQTERIWRSMKENG 238


>ref|XP_003551785.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Glycine max]
          Length = 749

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/141 (56%), Positives = 103/141 (73%)
 Frame = +2

Query: 2   DEEVLSNRILKLSRSNKVASALSLYRSMEFSALRPNLHACNSLLSCLVRNQVLDEALKIF 181
           DE VLSNRIL LSR+NK+ SA+  +RSME S L PN+HACNSL+S L+RN   D  +K+F
Sbjct: 316 DENVLSNRILVLSRTNKIRSAMEYFRSMELSGLSPNIHACNSLISSLLRNGWFDNCIKVF 375

Query: 182 EFMKESQMTTGHTYSLILKAVANARGCNAALDMCEDLLGGSYIQKEFDAIVYNTMLSICG 361
            F +   +TTGHTYSLIL A A A GC++AL +  +L     ++K+FDAIVYNTM+SIC 
Sbjct: 376 NFTRAKGITTGHTYSLILMAHAKAHGCDSALGLFRELESECDVEKDFDAIVYNTMISICR 435

Query: 362 KTNNWVQTERIWRNLKDNGHA 424
             +NW + ER+WR++K NG A
Sbjct: 436 DVDNWSEIERLWRSMKANGCA 456