BLASTX nr result

ID: Cnidium21_contig00039937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039937
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27547.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   126   2e-27
ref|XP_002315633.1| multidrug resistance protein ABC transporter...   125   5e-27
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   125   5e-27
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   124   6e-27

>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/88 (69%), Positives = 67/88 (76%)
 Frame = +3

Query: 3    TIRCFNQEDRFLNRNISLINDYSRVAFHNSSTMEWLCVRXXXXXXXXXXXXXXXXXXXPR 182
            TIRCF+Q+DRFL RN+SLI+DYSRVAFHN++TMEWLCVR                   PR
Sbjct: 987  TIRCFSQDDRFLRRNLSLIDDYSRVAFHNTATMEWLCVRINFLFNLVFFLVLVILVSLPR 1046

Query: 183  SAIDPSLAGLAATYGLNLNVLQAWVIWN 266
            SAI PSLAGLAATYGLNLNVLQAWVIWN
Sbjct: 1047 SAISPSLAGLAATYGLNLNVLQAWVIWN 1074


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/88 (69%), Positives = 67/88 (76%)
 Frame = +3

Query: 3    TIRCFNQEDRFLNRNISLINDYSRVAFHNSSTMEWLCVRXXXXXXXXXXXXXXXXXXXPR 182
            TIRCF+Q+DRFL RN+SLI+DYSRVAFHN++TMEWLCVR                   PR
Sbjct: 1086 TIRCFSQDDRFLRRNLSLIDDYSRVAFHNTATMEWLCVRINFLFNLVFFLVLVILVSLPR 1145

Query: 183  SAIDPSLAGLAATYGLNLNVLQAWVIWN 266
            SAI PSLAGLAATYGLNLNVLQAWVIWN
Sbjct: 1146 SAISPSLAGLAATYGLNLNVLQAWVIWN 1173


>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/88 (67%), Positives = 66/88 (75%)
 Frame = +3

Query: 3   TIRCFNQEDRFLNRNISLINDYSRVAFHNSSTMEWLCVRXXXXXXXXXXXXXXXXXXXPR 182
           TIRCFNQE+RFL RN+SLI+DYSR+ FHNS TMEWLCVR                   P+
Sbjct: 671 TIRCFNQEERFLTRNLSLIDDYSRIVFHNSGTMEWLCVRINFLFNLGFFLVLIILVSLPK 730

Query: 183 SAIDPSLAGLAATYGLNLNVLQAWVIWN 266
           SAI+PSLAGLAATYGLNLNVLQ+WVIWN
Sbjct: 731 SAINPSLAGLAATYGLNLNVLQSWVIWN 758


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/88 (67%), Positives = 66/88 (75%)
 Frame = +3

Query: 3    TIRCFNQEDRFLNRNISLINDYSRVAFHNSSTMEWLCVRXXXXXXXXXXXXXXXXXXXPR 182
            TIRCFNQE+RFL R++SLI+DYSR+ FHNS TMEWLC+R                   P+
Sbjct: 991  TIRCFNQEERFLMRSLSLIDDYSRIVFHNSGTMEWLCIRINFLFNLGFFLVLIILVNLPK 1050

Query: 183  SAIDPSLAGLAATYGLNLNVLQAWVIWN 266
            SAIDPSLAGLAATYGLNLNVLQAWVIWN
Sbjct: 1051 SAIDPSLAGLAATYGLNLNVLQAWVIWN 1078


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/88 (67%), Positives = 65/88 (73%)
 Frame = +3

Query: 3    TIRCFNQEDRFLNRNISLINDYSRVAFHNSSTMEWLCVRXXXXXXXXXXXXXXXXXXXPR 182
            TI CFNQ+DRFL RN+SLI+DYSR+ FHN+ TMEWLC+R                   PR
Sbjct: 1087 TIHCFNQQDRFLMRNLSLIDDYSRIVFHNTGTMEWLCLRINFLFNLVFFLVLIILVNLPR 1146

Query: 183  SAIDPSLAGLAATYGLNLNVLQAWVIWN 266
            SAIDPSLAGLAATYGLNLNVLQAWVIWN
Sbjct: 1147 SAIDPSLAGLAATYGLNLNVLQAWVIWN 1174


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